data_5LPE # _model_server_result.job_id A3sJYBz3zyUWdrOKObDTEQ _model_server_result.datetime_utc '2024-11-14 23:43:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lpe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":303}' # _entry.id 5LPE # _exptl.entry_id 5LPE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.37 _cell.angle_gamma 90 _cell.entry_id 5LPE _cell.length_a 52.914 _cell.length_b 67.037 _cell.length_c 57.768 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LPE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 22 1_555 A SG CYS 148 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? disulf ? disulf3 A SG CYS 120 A CYS 129 1_555 A SG CYS 221 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 A SG CYS 127 A CYS 136 1_555 A SG CYS 193 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf5 A SG CYS 159 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf6 A SG CYS 183 A CYS 191 1_555 A SG CYS 208 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 10 B CYS 22 1_555 B SG CYS 148 B CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 B SG CYS 29 B CYS 42 1_555 B SG CYS 45 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf9 B SG CYS 120 B CYS 129 1_555 B SG CYS 221 B CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf10 B SG CYS 127 B CYS 136 1_555 B SG CYS 193 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf11 B SG CYS 159 B CYS 168 1_555 B SG CYS 173 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf12 B SG CYS 183 B CYS 191 1_555 B SG CYS 208 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc1 A ND1 HIS 44 A HIS 57 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc2 A OD2 ASP 92 A ASP 99 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc3 A OD2 ASP 95 A ASP 102 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc4 B ND1 HIS 44 B HIS 57 1_555 J ZN ZN . B ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc5 B OD2 ASP 92 B ASP 99 1_555 J ZN ZN . B ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc6 B OD2 ASP 95 B ASP 102 1_555 J ZN ZN . B ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5LPE _atom_sites.fract_transf_matrix[1][1] 0.018899 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004841 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 301 1 SO4 SO4 . D 2 SO4 A 1 302 2 SO4 SO4 . E 2 SO4 A 1 303 3 SO4 SO4 . F 3 ZN A 1 304 1 ZN ZN . G 2 SO4 B 1 301 4 SO4 SO4 . H 2 SO4 B 1 302 5 SO4 SO4 . I 2 SO4 B 1 303 6 SO4 SO4 . J 3 ZN B 1 304 2 ZN ZN . K 4 HOH A 1 401 98 HOH HOH . K 4 HOH A 2 402 5 HOH HOH . K 4 HOH A 3 403 34 HOH HOH . K 4 HOH A 4 404 15 HOH HOH . K 4 HOH A 5 405 3 HOH HOH . K 4 HOH A 6 406 11 HOH HOH . K 4 HOH A 7 407 91 HOH HOH . K 4 HOH A 8 408 28 HOH HOH . K 4 HOH A 9 409 36 HOH HOH . K 4 HOH A 10 410 12 HOH HOH . K 4 HOH A 11 411 10 HOH HOH . K 4 HOH A 12 412 89 HOH HOH . K 4 HOH A 13 413 24 HOH HOH . K 4 HOH A 14 414 92 HOH HOH . K 4 HOH A 15 415 2 HOH HOH . K 4 HOH A 16 416 22 HOH HOH . K 4 HOH A 17 417 116 HOH HOH . K 4 HOH A 18 418 100 HOH HOH . K 4 HOH A 19 419 23 HOH HOH . K 4 HOH A 20 420 18 HOH HOH . K 4 HOH A 21 421 27 HOH HOH . K 4 HOH A 22 422 67 HOH HOH . K 4 HOH A 23 423 101 HOH HOH . K 4 HOH A 24 424 52 HOH HOH . K 4 HOH A 25 425 112 HOH HOH . K 4 HOH A 26 426 81 HOH HOH . K 4 HOH A 27 427 74 HOH HOH . K 4 HOH A 28 428 70 HOH HOH . K 4 HOH A 29 429 48 HOH HOH . K 4 HOH A 30 430 29 HOH HOH . K 4 HOH A 31 431 32 HOH HOH . K 4 HOH A 32 432 25 HOH HOH . K 4 HOH A 33 433 21 HOH HOH . K 4 HOH A 34 434 66 HOH HOH . K 4 HOH A 35 435 86 HOH HOH . K 4 HOH A 36 436 108 HOH HOH . K 4 HOH A 37 437 82 HOH HOH . K 4 HOH A 38 438 102 HOH HOH . K 4 HOH A 39 439 49 HOH HOH . K 4 HOH A 40 440 95 HOH HOH . K 4 HOH A 41 441 68 HOH HOH . K 4 HOH A 42 442 69 HOH HOH . K 4 HOH A 43 443 33 HOH HOH . K 4 HOH A 44 444 61 HOH HOH . K 4 HOH A 45 445 26 HOH HOH . K 4 HOH A 46 446 109 HOH HOH . K 4 HOH A 47 447 38 HOH HOH . K 4 HOH A 48 448 53 HOH HOH . K 4 HOH A 49 449 76 HOH HOH . K 4 HOH A 50 450 30 HOH HOH . K 4 HOH A 51 451 123 HOH HOH . K 4 HOH A 52 452 97 HOH HOH . K 4 HOH A 53 453 119 HOH HOH . K 4 HOH A 54 454 16 HOH HOH . K 4 HOH A 55 455 9 HOH HOH . K 4 HOH A 56 456 105 HOH HOH . K 4 HOH A 57 457 20 HOH HOH . K 4 HOH A 58 458 8 HOH HOH . K 4 HOH A 59 459 73 HOH HOH . K 4 HOH A 60 460 60 HOH HOH . K 4 HOH A 61 461 83 HOH HOH . K 4 HOH A 62 462 110 HOH HOH . K 4 HOH A 63 463 115 HOH HOH . K 4 HOH A 64 464 50 HOH HOH . K 4 HOH A 65 465 114 HOH HOH . K 4 HOH A 66 466 65 HOH HOH . K 4 HOH A 67 467 7 HOH HOH . K 4 HOH A 68 468 80 HOH HOH . K 4 HOH A 69 469 96 HOH HOH . K 4 HOH A 70 470 120 HOH HOH . K 4 HOH A 71 471 99 HOH HOH . K 4 HOH A 72 472 51 HOH HOH . L 4 HOH B 1 401 19 HOH HOH . L 4 HOH B 2 402 117 HOH HOH . L 4 HOH B 3 403 88 HOH HOH . L 4 HOH B 4 404 104 HOH HOH . L 4 HOH B 5 405 107 HOH HOH . L 4 HOH B 6 406 90 HOH HOH . L 4 HOH B 7 407 42 HOH HOH . L 4 HOH B 8 408 41 HOH HOH . L 4 HOH B 9 409 84 HOH HOH . L 4 HOH B 10 410 124 HOH HOH . L 4 HOH B 11 411 113 HOH HOH . L 4 HOH B 12 412 14 HOH HOH . L 4 HOH B 13 413 71 HOH HOH . L 4 HOH B 14 414 75 HOH HOH . L 4 HOH B 15 415 85 HOH HOH . L 4 HOH B 16 416 79 HOH HOH . L 4 HOH B 17 417 121 HOH HOH . L 4 HOH B 18 418 63 HOH HOH . L 4 HOH B 19 419 118 HOH HOH . L 4 HOH B 20 420 103 HOH HOH . L 4 HOH B 21 421 31 HOH HOH . L 4 HOH B 22 422 47 HOH HOH . L 4 HOH B 23 423 54 HOH HOH . L 4 HOH B 24 424 13 HOH HOH . L 4 HOH B 25 425 77 HOH HOH . L 4 HOH B 26 426 62 HOH HOH . L 4 HOH B 27 427 44 HOH HOH . L 4 HOH B 28 428 57 HOH HOH . L 4 HOH B 29 429 111 HOH HOH . L 4 HOH B 30 430 46 HOH HOH . L 4 HOH B 31 431 45 HOH HOH . L 4 HOH B 32 432 37 HOH HOH . L 4 HOH B 33 433 6 HOH HOH . L 4 HOH B 34 434 64 HOH HOH . L 4 HOH B 35 435 78 HOH HOH . L 4 HOH B 36 436 35 HOH HOH . L 4 HOH B 37 437 59 HOH HOH . L 4 HOH B 38 438 58 HOH HOH . L 4 HOH B 39 439 1 HOH HOH . L 4 HOH B 40 440 40 HOH HOH . L 4 HOH B 41 441 87 HOH HOH . L 4 HOH B 42 442 106 HOH HOH . L 4 HOH B 43 443 122 HOH HOH . L 4 HOH B 44 444 4 HOH HOH . L 4 HOH B 45 445 43 HOH HOH . L 4 HOH B 46 446 56 HOH HOH . L 4 HOH B 47 447 72 HOH HOH . L 4 HOH B 48 448 39 HOH HOH . L 4 HOH B 49 449 94 HOH HOH . L 4 HOH B 50 450 55 HOH HOH . L 4 HOH B 51 451 93 HOH HOH . L 4 HOH B 52 452 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 2 -46.797 -10.341 -16.948 1 69.89 ? S SO4 303 B 1 HETATM 2 O O1 SO4 . . . I 2 -46.129 -10.074 -18.241 1 53.24 ? O1 SO4 303 B 1 HETATM 3 O O2 SO4 . . . I 2 -48.016 -11.149 -17.18 1 61.19 ? O2 SO4 303 B 1 HETATM 4 O O3 SO4 . . . I 2 -45.875 -11.084 -16.061 1 62.64 ? O3 SO4 303 B 1 HETATM 5 O O4 SO4 . . . I 2 -47.169 -9.059 -16.311 1 58.78 ? O4 SO4 303 B 1 # _model_server_stats.io_time_ms 96 _model_server_stats.parse_time_ms 197 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 525 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 5 #