data_5LQ8 # _model_server_result.job_id 2qyWpxuM9QzQ0b1TWxMQzg _model_server_result.datetime_utc '2024-10-13 17:17:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lq8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5LQ8 # _exptl.entry_id 5LQ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.022 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'METHYLPHOSPHONIC ACID ESTER GROUP' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.56 _cell.angle_gamma 90 _cell.entry_id 5LQ8 _cell.length_a 45.86 _cell.length_b 57.08 _cell.length_c 54.17 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C H5 O3 P' _chem_comp.formula_weight 96.022 _chem_comp.id GB _chem_comp.mon_nstd_flag . _chem_comp.name 'METHYLPHOSPHONIC ACID ESTER GROUP' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 GB sing 70 n n P1 O2 GB doub 71 n n P1 C1 GB sing 72 n n O1 HO1 GB sing 73 n n C1 H1 GB sing 74 n n C1 H2 GB sing 75 n n C1 H3 GB sing 76 n n O3 P1 GB sing 77 n n O3 HO3 GB sing 78 n n # _atom_sites.entry_id 5LQ8 _atom_sites.fract_transf_matrix[1][1] 0.021805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006484 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017519 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GB A 1 401 1 GB MPN . C 2 GB A 1 402 2 GB MPN . D 3 HOH A 1 501 84 HOH HOH . D 3 HOH A 2 502 89 HOH HOH . D 3 HOH A 3 503 65 HOH HOH . D 3 HOH A 4 504 1 HOH HOH . D 3 HOH A 5 505 9 HOH HOH . D 3 HOH A 6 506 71 HOH HOH . D 3 HOH A 7 507 10 HOH HOH . D 3 HOH A 8 508 29 HOH HOH . D 3 HOH A 9 509 12 HOH HOH . D 3 HOH A 10 510 7 HOH HOH . D 3 HOH A 11 511 75 HOH HOH . D 3 HOH A 12 512 27 HOH HOH . D 3 HOH A 13 513 48 HOH HOH . D 3 HOH A 14 514 26 HOH HOH . D 3 HOH A 15 515 68 HOH HOH . D 3 HOH A 16 516 81 HOH HOH . D 3 HOH A 17 517 58 HOH HOH . D 3 HOH A 18 518 22 HOH HOH . D 3 HOH A 19 519 6 HOH HOH . D 3 HOH A 20 520 3 HOH HOH . D 3 HOH A 21 521 35 HOH HOH . D 3 HOH A 22 522 17 HOH HOH . D 3 HOH A 23 523 62 HOH HOH . D 3 HOH A 24 524 23 HOH HOH . D 3 HOH A 25 525 4 HOH HOH . D 3 HOH A 26 526 34 HOH HOH . D 3 HOH A 27 527 51 HOH HOH . D 3 HOH A 28 528 60 HOH HOH . D 3 HOH A 29 529 73 HOH HOH . D 3 HOH A 30 530 21 HOH HOH . D 3 HOH A 31 531 90 HOH HOH . D 3 HOH A 32 532 63 HOH HOH . D 3 HOH A 33 533 55 HOH HOH . D 3 HOH A 34 534 77 HOH HOH . D 3 HOH A 35 535 16 HOH HOH . D 3 HOH A 36 536 14 HOH HOH . D 3 HOH A 37 537 82 HOH HOH . D 3 HOH A 38 538 67 HOH HOH . D 3 HOH A 39 539 40 HOH HOH . D 3 HOH A 40 540 28 HOH HOH . D 3 HOH A 41 541 83 HOH HOH . D 3 HOH A 42 542 45 HOH HOH . D 3 HOH A 43 543 13 HOH HOH . D 3 HOH A 44 544 59 HOH HOH . D 3 HOH A 45 545 25 HOH HOH . D 3 HOH A 46 546 42 HOH HOH . D 3 HOH A 47 547 72 HOH HOH . D 3 HOH A 48 548 5 HOH HOH . D 3 HOH A 49 549 41 HOH HOH . D 3 HOH A 50 550 50 HOH HOH . D 3 HOH A 51 551 37 HOH HOH . D 3 HOH A 52 552 70 HOH HOH . D 3 HOH A 53 553 20 HOH HOH . D 3 HOH A 54 554 31 HOH HOH . D 3 HOH A 55 555 57 HOH HOH . D 3 HOH A 56 556 36 HOH HOH . D 3 HOH A 57 557 32 HOH HOH . D 3 HOH A 58 558 91 HOH HOH . D 3 HOH A 59 559 61 HOH HOH . D 3 HOH A 60 560 19 HOH HOH . D 3 HOH A 61 561 64 HOH HOH . D 3 HOH A 62 562 11 HOH HOH . D 3 HOH A 63 563 56 HOH HOH . D 3 HOH A 64 564 39 HOH HOH . D 3 HOH A 65 565 30 HOH HOH . D 3 HOH A 66 566 8 HOH HOH . D 3 HOH A 67 567 78 HOH HOH . D 3 HOH A 68 568 33 HOH HOH . D 3 HOH A 69 569 24 HOH HOH . D 3 HOH A 70 570 80 HOH HOH . D 3 HOH A 71 571 15 HOH HOH . D 3 HOH A 72 572 74 HOH HOH . D 3 HOH A 73 573 18 HOH HOH . D 3 HOH A 74 574 46 HOH HOH . D 3 HOH A 75 575 85 HOH HOH . D 3 HOH A 76 576 87 HOH HOH . D 3 HOH A 77 577 53 HOH HOH . D 3 HOH A 78 578 79 HOH HOH . D 3 HOH A 79 579 43 HOH HOH . D 3 HOH A 80 580 52 HOH HOH . D 3 HOH A 81 581 38 HOH HOH . D 3 HOH A 82 582 47 HOH HOH . D 3 HOH A 83 583 49 HOH HOH . D 3 HOH A 84 584 54 HOH HOH . D 3 HOH A 85 585 86 HOH HOH . D 3 HOH A 86 586 66 HOH HOH . D 3 HOH A 87 587 2 HOH HOH . D 3 HOH A 88 588 76 HOH HOH . D 3 HOH A 89 589 69 HOH HOH . D 3 HOH A 90 590 92 HOH HOH . D 3 HOH A 91 591 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 GB . . . C 2 16.346 30.433 15.776 1 31.42 ? P1 GB 402 A 1 HETATM 2 O O1 GB . . . C 2 15.624 31.446 16.611 1 28.6 ? O1 GB 402 A 1 HETATM 3 O O2 GB . . . C 2 15.541 29.164 15.574 1 37.18 ? O2 GB 402 A 1 HETATM 4 C C1 GB . . . C 2 16.521 31.323 14.191 1 30.75 ? C1 GB 402 A 1 HETATM 5 O O3 GB . . . C 2 17.717 30.124 16.324 1 35.02 ? O3 GB 402 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #