data_5LVQ
#
_model_server_result.job_id            geGRbwPlAB3vdnu3tGFhOg 
_model_server_result.datetime_utc      '2024-11-25 15:54:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lvq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":901}' 
#
_entry.id    5LVQ 
#
_exptl.entry_id    5LVQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5LVQ 
_cell.length_a            99.859 
_cell.length_b            99.859 
_cell.length_c            100.762 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LVQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 127 n n 
C1 C2 EDO sing 128 n n 
C1 H11 EDO sing 129 n n 
C1 H12 EDO sing 130 n n 
O1 HO1 EDO sing 131 n n 
C2 O2 EDO sing 132 n n 
C2 H21 EDO sing 133 n n 
C2 H22 EDO sing 134 n n 
O2 HO2 EDO sing 135 n n 
#
_atom_sites.entry_id                     5LVQ 
_atom_sites.fract_transf_matrix[1][1]    0.010014 
_atom_sites.fract_transf_matrix[1][2]    0.005782 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011563 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009924 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 901 1 EDO EDO . 
D 2 EDO A 1 902 2 EDO EDO . 
E 2 EDO A 1 903 3 EDO EDO . 
F 3 2LX A 1 904 1 2LX XXX . 
G 2 EDO B 1 901 4 EDO EDO . 
H 2 EDO B 1 902 5 EDO EDO . 
I 4 DMS B 1 903 1 DMS DMS . 
J 5 HOH A 1 1001 82 HOH HOH . 
J 5 HOH A 2 1002 72 HOH HOH . 
J 5 HOH A 3 1003 58 HOH HOH . 
J 5 HOH A 4 1004 122 HOH HOH . 
J 5 HOH A 5 1005 29 HOH HOH . 
J 5 HOH A 6 1006 24 HOH HOH . 
J 5 HOH A 7 1007 114 HOH HOH . 
J 5 HOH A 8 1008 46 HOH HOH . 
J 5 HOH A 9 1009 35 HOH HOH . 
J 5 HOH A 10 1010 47 HOH HOH . 
J 5 HOH A 11 1011 7 HOH HOH . 
J 5 HOH A 12 1012 89 HOH HOH . 
J 5 HOH A 13 1013 74 HOH HOH . 
J 5 HOH A 14 1014 28 HOH HOH . 
J 5 HOH A 15 1015 136 HOH HOH . 
J 5 HOH A 16 1016 33 HOH HOH . 
J 5 HOH A 17 1017 16 HOH HOH . 
J 5 HOH A 18 1018 19 HOH HOH . 
J 5 HOH A 19 1019 41 HOH HOH . 
J 5 HOH A 20 1020 49 HOH HOH . 
J 5 HOH A 21 1021 57 HOH HOH . 
J 5 HOH A 22 1022 34 HOH HOH . 
J 5 HOH A 23 1023 18 HOH HOH . 
J 5 HOH A 24 1024 23 HOH HOH . 
J 5 HOH A 25 1025 40 HOH HOH . 
J 5 HOH A 26 1026 66 HOH HOH . 
J 5 HOH A 27 1027 51 HOH HOH . 
J 5 HOH A 28 1028 44 HOH HOH . 
J 5 HOH A 29 1029 127 HOH HOH . 
J 5 HOH A 30 1030 78 HOH HOH . 
J 5 HOH A 31 1031 143 HOH HOH . 
J 5 HOH A 32 1032 118 HOH HOH . 
J 5 HOH A 33 1033 42 HOH HOH . 
J 5 HOH A 34 1034 121 HOH HOH . 
J 5 HOH A 35 1035 50 HOH HOH . 
J 5 HOH A 36 1036 12 HOH HOH . 
J 5 HOH A 37 1037 13 HOH HOH . 
J 5 HOH A 38 1038 73 HOH HOH . 
J 5 HOH A 39 1039 126 HOH HOH . 
J 5 HOH A 40 1040 141 HOH HOH . 
J 5 HOH A 41 1041 4 HOH HOH . 
J 5 HOH A 42 1042 117 HOH HOH . 
J 5 HOH A 43 1043 68 HOH HOH . 
J 5 HOH A 44 1044 144 HOH HOH . 
J 5 HOH A 45 1045 124 HOH HOH . 
J 5 HOH A 46 1046 71 HOH HOH . 
J 5 HOH A 47 1047 116 HOH HOH . 
J 5 HOH A 48 1048 64 HOH HOH . 
J 5 HOH A 49 1049 90 HOH HOH . 
J 5 HOH A 50 1050 128 HOH HOH . 
J 5 HOH A 51 1051 62 HOH HOH . 
J 5 HOH A 52 1052 52 HOH HOH . 
J 5 HOH A 53 1053 87 HOH HOH . 
J 5 HOH A 54 1054 120 HOH HOH . 
J 5 HOH A 55 1055 88 HOH HOH . 
J 5 HOH A 56 1056 76 HOH HOH . 
J 5 HOH A 57 1057 91 HOH HOH . 
J 5 HOH A 58 1058 61 HOH HOH . 
J 5 HOH A 59 1059 115 HOH HOH . 
J 5 HOH A 60 1060 139 HOH HOH . 
J 5 HOH A 61 1061 140 HOH HOH . 
K 5 HOH B 1 1001 133 HOH HOH . 
K 5 HOH B 2 1002 26 HOH HOH . 
K 5 HOH B 3 1003 9 HOH HOH . 
K 5 HOH B 4 1004 3 HOH HOH . 
K 5 HOH B 5 1005 22 HOH HOH . 
K 5 HOH B 6 1006 56 HOH HOH . 
K 5 HOH B 7 1007 109 HOH HOH . 
K 5 HOH B 8 1008 129 HOH HOH . 
K 5 HOH B 9 1009 86 HOH HOH . 
K 5 HOH B 10 1010 98 HOH HOH . 
K 5 HOH B 11 1011 100 HOH HOH . 
K 5 HOH B 12 1012 70 HOH HOH . 
K 5 HOH B 13 1013 110 HOH HOH . 
K 5 HOH B 14 1014 93 HOH HOH . 
K 5 HOH B 15 1015 134 HOH HOH . 
K 5 HOH B 16 1016 39 HOH HOH . 
K 5 HOH B 17 1017 80 HOH HOH . 
K 5 HOH B 18 1018 99 HOH HOH . 
K 5 HOH B 19 1019 17 HOH HOH . 
K 5 HOH B 20 1020 25 HOH HOH . 
K 5 HOH B 21 1021 2 HOH HOH . 
K 5 HOH B 22 1022 48 HOH HOH . 
K 5 HOH B 23 1023 103 HOH HOH . 
K 5 HOH B 24 1024 20 HOH HOH . 
K 5 HOH B 25 1025 38 HOH HOH . 
K 5 HOH B 26 1026 11 HOH HOH . 
K 5 HOH B 27 1027 97 HOH HOH . 
K 5 HOH B 28 1028 6 HOH HOH . 
K 5 HOH B 29 1029 31 HOH HOH . 
K 5 HOH B 30 1030 102 HOH HOH . 
K 5 HOH B 31 1031 5 HOH HOH . 
K 5 HOH B 32 1032 53 HOH HOH . 
K 5 HOH B 33 1033 81 HOH HOH . 
K 5 HOH B 34 1034 107 HOH HOH . 
K 5 HOH B 35 1035 43 HOH HOH . 
K 5 HOH B 36 1036 10 HOH HOH . 
K 5 HOH B 37 1037 15 HOH HOH . 
K 5 HOH B 38 1038 30 HOH HOH . 
K 5 HOH B 39 1039 96 HOH HOH . 
K 5 HOH B 40 1040 135 HOH HOH . 
K 5 HOH B 41 1041 1 HOH HOH . 
K 5 HOH B 42 1042 131 HOH HOH . 
K 5 HOH B 43 1043 92 HOH HOH . 
K 5 HOH B 44 1044 132 HOH HOH . 
K 5 HOH B 45 1045 105 HOH HOH . 
K 5 HOH B 46 1046 95 HOH HOH . 
K 5 HOH B 47 1047 112 HOH HOH . 
K 5 HOH B 48 1048 111 HOH HOH . 
K 5 HOH B 49 1049 113 HOH HOH . 
K 5 HOH B 50 1050 123 HOH HOH . 
K 5 HOH B 51 1051 85 HOH HOH . 
K 5 HOH B 52 1052 60 HOH HOH . 
K 5 HOH B 53 1053 65 HOH HOH . 
K 5 HOH B 54 1054 84 HOH HOH . 
K 5 HOH B 55 1055 83 HOH HOH . 
K 5 HOH B 56 1056 104 HOH HOH . 
K 5 HOH B 57 1057 45 HOH HOH . 
K 5 HOH B 58 1058 137 HOH HOH . 
K 5 HOH B 59 1059 142 HOH HOH . 
K 5 HOH B 60 1060 32 HOH HOH . 
K 5 HOH B 61 1061 125 HOH HOH . 
K 5 HOH B 62 1062 79 HOH HOH . 
K 5 HOH B 63 1063 69 HOH HOH . 
K 5 HOH B 64 1064 106 HOH HOH . 
K 5 HOH B 65 1065 130 HOH HOH . 
K 5 HOH B 66 1066 138 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 2 33.016 14.922 83.928 1 62.85 ? C1 EDO 901 B 1 
HETATM 2 O O1 EDO . . . G 2 34.445 15.038 83.84 1 69.15 ? O1 EDO 901 B 1 
HETATM 3 C C2 EDO . . . G 2 32.595 15.26 85.381 1 74.56 ? C2 EDO 901 B 1 
HETATM 4 O O2 EDO . . . G 2 31.892 16.53 85.371 1 78.81 ? O2 EDO 901 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#