data_5LVQ # _model_server_result.job_id 8QSo-qgkp8LDKRRTB0GOYA _model_server_result.datetime_utc '2024-11-25 15:30:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":904}' # _entry.id 5LVQ # _exptl.entry_id 5LVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 235.279 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-methyl-2-(tetrahydro-2H-pyran-4-yloxy)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5LVQ _cell.length_a 99.859 _cell.length_b 99.859 _cell.length_c 100.762 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H17 N O3' _chem_comp.formula_weight 235.279 _chem_comp.id 2LX _chem_comp.mon_nstd_flag . _chem_comp.name N-methyl-2-(tetrahydro-2H-pyran-4-yloxy)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 2LX sing 1 n n C13 O14 2LX sing 2 n n C12 C11 2LX sing 3 n n C11 O10 2LX sing 4 n n C11 C16 2LX sing 5 n n O14 C15 2LX sing 6 n n O10 C09 2LX sing 7 n n C01 N02 2LX sing 8 n n N02 C03 2LX sing 9 n n C09 C08 2LX doub 10 n y C09 C04 2LX sing 11 n y C08 C07 2LX sing 12 n y C03 C04 2LX sing 13 n n C03 O17 2LX doub 14 n n C04 C05 2LX doub 15 n y C15 C16 2LX sing 16 n n C07 C06 2LX doub 17 n y C05 C06 2LX sing 18 n y C01 H1 2LX sing 19 n n C01 H2 2LX sing 20 n n C01 H3 2LX sing 21 n n N02 H4 2LX sing 22 n n C05 H5 2LX sing 23 n n C06 H6 2LX sing 24 n n C07 H7 2LX sing 25 n n C08 H8 2LX sing 26 n n C11 H9 2LX sing 27 n n C12 H10 2LX sing 28 n n C12 H11 2LX sing 29 n n C13 H12 2LX sing 30 n n C13 H13 2LX sing 31 n n C15 H14 2LX sing 32 n n C15 H15 2LX sing 33 n n C16 H16 2LX sing 34 n n C16 H17 2LX sing 35 n n # _atom_sites.entry_id 5LVQ _atom_sites.fract_transf_matrix[1][1] 0.010014 _atom_sites.fract_transf_matrix[1][2] 0.005782 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009924 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 901 1 EDO EDO . D 2 EDO A 1 902 2 EDO EDO . E 2 EDO A 1 903 3 EDO EDO . F 3 2LX A 1 904 1 2LX XXX . G 2 EDO B 1 901 4 EDO EDO . H 2 EDO B 1 902 5 EDO EDO . I 4 DMS B 1 903 1 DMS DMS . J 5 HOH A 1 1001 82 HOH HOH . J 5 HOH A 2 1002 72 HOH HOH . J 5 HOH A 3 1003 58 HOH HOH . J 5 HOH A 4 1004 122 HOH HOH . J 5 HOH A 5 1005 29 HOH HOH . J 5 HOH A 6 1006 24 HOH HOH . J 5 HOH A 7 1007 114 HOH HOH . J 5 HOH A 8 1008 46 HOH HOH . J 5 HOH A 9 1009 35 HOH HOH . J 5 HOH A 10 1010 47 HOH HOH . J 5 HOH A 11 1011 7 HOH HOH . J 5 HOH A 12 1012 89 HOH HOH . J 5 HOH A 13 1013 74 HOH HOH . J 5 HOH A 14 1014 28 HOH HOH . J 5 HOH A 15 1015 136 HOH HOH . J 5 HOH A 16 1016 33 HOH HOH . J 5 HOH A 17 1017 16 HOH HOH . J 5 HOH A 18 1018 19 HOH HOH . J 5 HOH A 19 1019 41 HOH HOH . J 5 HOH A 20 1020 49 HOH HOH . J 5 HOH A 21 1021 57 HOH HOH . J 5 HOH A 22 1022 34 HOH HOH . J 5 HOH A 23 1023 18 HOH HOH . J 5 HOH A 24 1024 23 HOH HOH . J 5 HOH A 25 1025 40 HOH HOH . J 5 HOH A 26 1026 66 HOH HOH . J 5 HOH A 27 1027 51 HOH HOH . J 5 HOH A 28 1028 44 HOH HOH . J 5 HOH A 29 1029 127 HOH HOH . J 5 HOH A 30 1030 78 HOH HOH . J 5 HOH A 31 1031 143 HOH HOH . J 5 HOH A 32 1032 118 HOH HOH . J 5 HOH A 33 1033 42 HOH HOH . J 5 HOH A 34 1034 121 HOH HOH . J 5 HOH A 35 1035 50 HOH HOH . J 5 HOH A 36 1036 12 HOH HOH . J 5 HOH A 37 1037 13 HOH HOH . J 5 HOH A 38 1038 73 HOH HOH . J 5 HOH A 39 1039 126 HOH HOH . J 5 HOH A 40 1040 141 HOH HOH . J 5 HOH A 41 1041 4 HOH HOH . J 5 HOH A 42 1042 117 HOH HOH . J 5 HOH A 43 1043 68 HOH HOH . J 5 HOH A 44 1044 144 HOH HOH . J 5 HOH A 45 1045 124 HOH HOH . J 5 HOH A 46 1046 71 HOH HOH . J 5 HOH A 47 1047 116 HOH HOH . J 5 HOH A 48 1048 64 HOH HOH . J 5 HOH A 49 1049 90 HOH HOH . J 5 HOH A 50 1050 128 HOH HOH . J 5 HOH A 51 1051 62 HOH HOH . J 5 HOH A 52 1052 52 HOH HOH . J 5 HOH A 53 1053 87 HOH HOH . J 5 HOH A 54 1054 120 HOH HOH . J 5 HOH A 55 1055 88 HOH HOH . J 5 HOH A 56 1056 76 HOH HOH . J 5 HOH A 57 1057 91 HOH HOH . J 5 HOH A 58 1058 61 HOH HOH . J 5 HOH A 59 1059 115 HOH HOH . J 5 HOH A 60 1060 139 HOH HOH . J 5 HOH A 61 1061 140 HOH HOH . K 5 HOH B 1 1001 133 HOH HOH . K 5 HOH B 2 1002 26 HOH HOH . K 5 HOH B 3 1003 9 HOH HOH . K 5 HOH B 4 1004 3 HOH HOH . K 5 HOH B 5 1005 22 HOH HOH . K 5 HOH B 6 1006 56 HOH HOH . K 5 HOH B 7 1007 109 HOH HOH . K 5 HOH B 8 1008 129 HOH HOH . K 5 HOH B 9 1009 86 HOH HOH . K 5 HOH B 10 1010 98 HOH HOH . K 5 HOH B 11 1011 100 HOH HOH . K 5 HOH B 12 1012 70 HOH HOH . K 5 HOH B 13 1013 110 HOH HOH . K 5 HOH B 14 1014 93 HOH HOH . K 5 HOH B 15 1015 134 HOH HOH . K 5 HOH B 16 1016 39 HOH HOH . K 5 HOH B 17 1017 80 HOH HOH . K 5 HOH B 18 1018 99 HOH HOH . K 5 HOH B 19 1019 17 HOH HOH . K 5 HOH B 20 1020 25 HOH HOH . K 5 HOH B 21 1021 2 HOH HOH . K 5 HOH B 22 1022 48 HOH HOH . K 5 HOH B 23 1023 103 HOH HOH . K 5 HOH B 24 1024 20 HOH HOH . K 5 HOH B 25 1025 38 HOH HOH . K 5 HOH B 26 1026 11 HOH HOH . K 5 HOH B 27 1027 97 HOH HOH . K 5 HOH B 28 1028 6 HOH HOH . K 5 HOH B 29 1029 31 HOH HOH . K 5 HOH B 30 1030 102 HOH HOH . K 5 HOH B 31 1031 5 HOH HOH . K 5 HOH B 32 1032 53 HOH HOH . K 5 HOH B 33 1033 81 HOH HOH . K 5 HOH B 34 1034 107 HOH HOH . K 5 HOH B 35 1035 43 HOH HOH . K 5 HOH B 36 1036 10 HOH HOH . K 5 HOH B 37 1037 15 HOH HOH . K 5 HOH B 38 1038 30 HOH HOH . K 5 HOH B 39 1039 96 HOH HOH . K 5 HOH B 40 1040 135 HOH HOH . K 5 HOH B 41 1041 1 HOH HOH . K 5 HOH B 42 1042 131 HOH HOH . K 5 HOH B 43 1043 92 HOH HOH . K 5 HOH B 44 1044 132 HOH HOH . K 5 HOH B 45 1045 105 HOH HOH . K 5 HOH B 46 1046 95 HOH HOH . K 5 HOH B 47 1047 112 HOH HOH . K 5 HOH B 48 1048 111 HOH HOH . K 5 HOH B 49 1049 113 HOH HOH . K 5 HOH B 50 1050 123 HOH HOH . K 5 HOH B 51 1051 85 HOH HOH . K 5 HOH B 52 1052 60 HOH HOH . K 5 HOH B 53 1053 65 HOH HOH . K 5 HOH B 54 1054 84 HOH HOH . K 5 HOH B 55 1055 83 HOH HOH . K 5 HOH B 56 1056 104 HOH HOH . K 5 HOH B 57 1057 45 HOH HOH . K 5 HOH B 58 1058 137 HOH HOH . K 5 HOH B 59 1059 142 HOH HOH . K 5 HOH B 60 1060 32 HOH HOH . K 5 HOH B 61 1061 125 HOH HOH . K 5 HOH B 62 1062 79 HOH HOH . K 5 HOH B 63 1063 69 HOH HOH . K 5 HOH B 64 1064 106 HOH HOH . K 5 HOH B 65 1065 130 HOH HOH . K 5 HOH B 66 1066 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 2LX . . . F 3 22.22 3.905 55.927 1 62.17 ? C01 2LX 904 A 1 HETATM 2 N N02 2LX . . . F 3 21.718 2.542 55.976 1 55.74 ? N02 2LX 904 A 1 HETATM 3 C C03 2LX . . . F 3 21.709 1.835 57.107 1 63.59 ? C03 2LX 904 A 1 HETATM 4 C C04 2LX . . . F 3 21.098 0.453 57.081 1 62.89 ? C04 2LX 904 A 1 HETATM 5 C C05 2LX . . . F 3 21.191 -0.26 58.281 1 62.97 ? C05 2LX 904 A 1 HETATM 6 C C06 2LX . . . F 3 20.811 -1.597 58.359 1 67.11 ? C06 2LX 904 A 1 HETATM 7 C C07 2LX . . . F 3 20.317 -2.256 57.242 1 69.16 ? C07 2LX 904 A 1 HETATM 8 C C08 2LX . . . F 3 20.167 -1.579 56.043 1 61.86 ? C08 2LX 904 A 1 HETATM 9 C C09 2LX . . . F 3 20.529 -0.217 55.967 1 73.84 ? C09 2LX 904 A 1 HETATM 10 O O10 2LX . . . F 3 20.252 0.574 54.869 1 71.22 ? O10 2LX 904 A 1 HETATM 11 C C11 2LX . . . F 3 20.047 -0.09 53.579 1 66.12 ? C11 2LX 904 A 1 HETATM 12 C C12 2LX . . . F 3 21.389 -0.167 52.892 1 72.15 ? C12 2LX 904 A 1 HETATM 13 C C13 2LX . . . F 3 21.217 -0.722 51.493 1 69.5 ? C13 2LX 904 A 1 HETATM 14 O O14 2LX . . . F 3 20.32 0.069 50.729 1 62.98 ? O14 2LX 904 A 1 HETATM 15 C C15 2LX . . . F 3 19.033 0.123 51.381 1 60.73 ? C15 2LX 904 A 1 HETATM 16 C C16 2LX . . . F 3 19.049 0.719 52.774 1 68.19 ? C16 2LX 904 A 1 HETATM 17 O O17 2LX . . . F 3 22.15 2.31 58.156 1 56.87 ? O17 2LX 904 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #