data_5LVU # _model_server_result.job_id y6Zc6EvBJSiA-qWCfE_6Rg _model_server_result.datetime_utc '2025-07-06 10:56:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lvu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5LVU # _exptl.entry_id 5LVU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5LVU _cell.length_a 166.54 _cell.length_b 166.54 _cell.length_c 98.97 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LVU _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 83.27 -144.227871 0 3 'crystal symmetry operation' 9_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 32.99 4 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 83.27 -144.227871 32.99 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5LVU _atom_sites.fract_transf_matrix[1][1] 0.006005 _atom_sites.fract_transf_matrix[1][2] 0.003467 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010104 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 2 SO4 A 1 402 2 SO4 SO4 . D 3 HOH A 1 501 3 HOH HOH . D 3 HOH A 2 502 19 HOH HOH . D 3 HOH A 3 503 62 HOH HOH . D 3 HOH A 4 504 21 HOH HOH . D 3 HOH A 5 505 14 HOH HOH . D 3 HOH A 6 506 11 HOH HOH . D 3 HOH A 7 507 33 HOH HOH . D 3 HOH A 8 508 37 HOH HOH . D 3 HOH A 9 509 45 HOH HOH . D 3 HOH A 10 510 4 HOH HOH . D 3 HOH A 11 511 10 HOH HOH . D 3 HOH A 12 512 61 HOH HOH . D 3 HOH A 13 513 53 HOH HOH . D 3 HOH A 14 514 23 HOH HOH . D 3 HOH A 15 515 38 HOH HOH . D 3 HOH A 16 516 22 HOH HOH . D 3 HOH A 17 517 51 HOH HOH . D 3 HOH A 18 518 25 HOH HOH . D 3 HOH A 19 519 29 HOH HOH . D 3 HOH A 20 520 46 HOH HOH . D 3 HOH A 21 521 31 HOH HOH . D 3 HOH A 22 522 59 HOH HOH . D 3 HOH A 23 523 54 HOH HOH . D 3 HOH A 24 524 15 HOH HOH . D 3 HOH A 25 525 49 HOH HOH . D 3 HOH A 26 526 30 HOH HOH . D 3 HOH A 27 527 7 HOH HOH . D 3 HOH A 28 528 43 HOH HOH . D 3 HOH A 29 529 24 HOH HOH . D 3 HOH A 30 530 41 HOH HOH . D 3 HOH A 31 531 64 HOH HOH . D 3 HOH A 32 532 32 HOH HOH . D 3 HOH A 33 533 36 HOH HOH . D 3 HOH A 34 534 58 HOH HOH . D 3 HOH A 35 535 20 HOH HOH . D 3 HOH A 36 536 17 HOH HOH . D 3 HOH A 37 537 28 HOH HOH . D 3 HOH A 38 538 40 HOH HOH . D 3 HOH A 39 539 9 HOH HOH . D 3 HOH A 40 540 12 HOH HOH . D 3 HOH A 41 541 44 HOH HOH . D 3 HOH A 42 542 26 HOH HOH . D 3 HOH A 43 543 27 HOH HOH . D 3 HOH A 44 544 18 HOH HOH . D 3 HOH A 45 545 5 HOH HOH . D 3 HOH A 46 546 16 HOH HOH . D 3 HOH A 47 547 8 HOH HOH . D 3 HOH A 48 548 34 HOH HOH . D 3 HOH A 49 549 48 HOH HOH . D 3 HOH A 50 550 13 HOH HOH . D 3 HOH A 51 551 6 HOH HOH . D 3 HOH A 52 552 42 HOH HOH . D 3 HOH A 53 553 57 HOH HOH . D 3 HOH A 54 554 63 HOH HOH . D 3 HOH A 55 555 56 HOH HOH . D 3 HOH A 56 556 35 HOH HOH . D 3 HOH A 57 557 52 HOH HOH . D 3 HOH A 58 558 50 HOH HOH . D 3 HOH A 59 559 39 HOH HOH . D 3 HOH A 60 560 60 HOH HOH . D 3 HOH A 61 561 55 HOH HOH . D 3 HOH A 62 562 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 49.798 -41.143 -28.92 1 39.99 ? S SO4 401 A 1 HETATM 2 O O1 SO4 . . . B 2 49.753 -41.41 -30.387 1 50.54 ? O1 SO4 401 A 1 HETATM 3 O O2 SO4 . . . B 2 49.509 -39.711 -28.641 1 51.11 ? O2 SO4 401 A 1 HETATM 4 O O3 SO4 . . . B 2 48.792 -41.993 -28.228 1 48.67 ? O3 SO4 401 A 1 HETATM 5 O O4 SO4 . . . B 2 51.167 -41.466 -28.423 1 54.03 ? O4 SO4 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #