data_5LWP # _model_server_result.job_id 7xIxvMlxYup2M8Q2jKIKkA _model_server_result.datetime_utc '2024-11-04 23:00:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lwp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5LWP # _exptl.entry_id 5LWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 503.858 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[3-[2-chloranyl-6-(trifluoromethyl)phenoxy]-5-(dimethylcarbamoyl)indazol-1-yl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5LWP _cell.length_a 173.81 _cell.length_b 173.81 _cell.length_c 68.4 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 193 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 455 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 193 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 455 _struct_conn.ptnr2_symmetry 6_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.108 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H17 Cl F3 N3 O4' _chem_comp.formula_weight 503.858 _chem_comp.id 79U _chem_comp.mon_nstd_flag . _chem_comp.name '4-[3-[2-chloranyl-6-(trifluoromethyl)phenoxy]-5-(dimethylcarbamoyl)indazol-1-yl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAV NAT 79U sing 1 n n OAS CAR 79U doub 2 n n NAT CAR 79U sing 3 n n NAT CAU 79U sing 4 n n CAR CAQ 79U sing 5 n n CAQ CAP 79U doub 6 n y CAQ CAW 79U sing 7 n y CAP CAO 79U sing 8 n y CAW CAX 79U doub 9 n y FAD CAB 79U sing 10 n n CAO CAM 79U sing 11 n y CAO CAY 79U doub 12 n y OAL CAM 79U sing 13 n n OAL CAK 79U sing 14 n n CAX CAY 79U sing 15 n y CAM NAN 79U doub 16 n y CL1 CAI 79U sing 17 n n CAK CAI 79U doub 18 n y CAK CAE 79U sing 19 n y CAY NAZ 79U sing 20 n y CAB CAE 79U sing 21 n n CAB FAC 79U sing 22 n n CAB FAA 79U sing 23 n n CAI CAH 79U sing 24 n y CAE CAF 79U doub 25 n y NAN NAZ 79U sing 26 n y CAH CAG 79U doub 27 n y NAZ CBA 79U sing 28 n n CAF CAG 79U sing 29 n y CBA CBB 79U doub 30 n y CBA CBI 79U sing 31 n y CBB CBC 79U sing 32 n y CBI CBH 79U doub 33 n y CBC CBD 79U doub 34 n y CBH CBD 79U sing 35 n y CBD CBE 79U sing 36 n n CBE OBG 79U doub 37 n n CBE OBF 79U sing 38 n n CAF H1 79U sing 39 n n CAG H2 79U sing 40 n n CAH H3 79U sing 41 n n CAP H4 79U sing 42 n n CAV H5 79U sing 43 n n CAV H6 79U sing 44 n n CAV H7 79U sing 45 n n CAU H8 79U sing 46 n n CAU H9 79U sing 47 n n CAU H10 79U sing 48 n n CAW H11 79U sing 49 n n CAX H12 79U sing 50 n n CBB H13 79U sing 51 n n CBC H14 79U sing 52 n n OBF H15 79U sing 53 n n CBH H16 79U sing 54 n n CBI H17 79U sing 55 n n # _atom_sites.entry_id 5LWP _atom_sites.fract_transf_matrix[1][1] 0.005753 _atom_sites.fract_transf_matrix[1][2] 0.003322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 79U A 1 601 1 79U DRG . C 3 HOH A 1 701 59 HOH HOH . C 3 HOH A 2 702 61 HOH HOH . C 3 HOH A 3 703 43 HOH HOH . C 3 HOH A 4 704 16 HOH HOH . C 3 HOH A 5 705 63 HOH HOH . C 3 HOH A 6 706 49 HOH HOH . C 3 HOH A 7 707 58 HOH HOH . C 3 HOH A 8 708 29 HOH HOH . C 3 HOH A 9 709 18 HOH HOH . C 3 HOH A 10 710 66 HOH HOH . C 3 HOH A 11 711 27 HOH HOH . C 3 HOH A 12 712 56 HOH HOH . C 3 HOH A 13 713 53 HOH HOH . C 3 HOH A 14 714 65 HOH HOH . C 3 HOH A 15 715 23 HOH HOH . C 3 HOH A 16 716 54 HOH HOH . C 3 HOH A 17 717 44 HOH HOH . C 3 HOH A 18 718 10 HOH HOH . C 3 HOH A 19 719 7 HOH HOH . C 3 HOH A 20 720 52 HOH HOH . C 3 HOH A 21 721 57 HOH HOH . C 3 HOH A 22 722 4 HOH HOH . C 3 HOH A 23 723 12 HOH HOH . C 3 HOH A 24 724 34 HOH HOH . C 3 HOH A 25 725 3 HOH HOH . C 3 HOH A 26 726 1 HOH HOH . C 3 HOH A 27 727 11 HOH HOH . C 3 HOH A 28 728 39 HOH HOH . C 3 HOH A 29 729 6 HOH HOH . C 3 HOH A 30 730 35 HOH HOH . C 3 HOH A 31 731 14 HOH HOH . C 3 HOH A 32 732 51 HOH HOH . C 3 HOH A 33 733 25 HOH HOH . C 3 HOH A 34 734 64 HOH HOH . C 3 HOH A 35 735 45 HOH HOH . C 3 HOH A 36 736 2 HOH HOH . C 3 HOH A 37 737 28 HOH HOH . C 3 HOH A 38 738 62 HOH HOH . C 3 HOH A 39 739 5 HOH HOH . C 3 HOH A 40 740 67 HOH HOH . C 3 HOH A 41 741 13 HOH HOH . C 3 HOH A 42 742 20 HOH HOH . C 3 HOH A 43 743 48 HOH HOH . C 3 HOH A 44 744 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAA 79U . . . B 2 33.639 -20.671 25.691 1 64.27 ? FAA 79U 601 A 1 HETATM 2 C CAB 79U . . . B 2 32.698 -19.971 24.985 1 51.21 ? CAB 79U 601 A 1 HETATM 3 F FAC 79U . . . B 2 31.462 -20.407 25.342 1 47.97 ? FAC 79U 601 A 1 HETATM 4 F FAD 79U . . . B 2 32.814 -20.205 23.615 1 53.09 ? FAD 79U 601 A 1 HETATM 5 C CAE 79U . . . B 2 32.91 -18.598 25.305 1 44.57 ? CAE 79U 601 A 1 HETATM 6 C CAF 79U . . . B 2 34.037 -18.218 26.06 1 44.56 ? CAF 79U 601 A 1 HETATM 7 C CAG 79U . . . B 2 34.261 -16.88 26.404 1 41.89 ? CAG 79U 601 A 1 HETATM 8 C CAH 79U . . . B 2 33.355 -15.913 25.975 1 44.1 ? CAH 79U 601 A 1 HETATM 9 C CAI 79U . . . B 2 32.244 -16.303 25.212 1 48.1 ? CAI 79U 601 A 1 HETATM 10 CL CL1 79U . . . B 2 31.058 -15.126 24.658 1 55.76 ? CL1 79U 601 A 1 HETATM 11 C CAK 79U . . . B 2 32.011 -17.63 24.917 1 41.25 ? CAK 79U 601 A 1 HETATM 12 O OAL 79U . . . B 2 30.895 -17.976 24.122 1 43.52 ? OAL 79U 601 A 1 HETATM 13 C CAM 79U . . . B 2 29.596 -18.046 24.608 1 41.58 ? CAM 79U 601 A 1 HETATM 14 N NAN 79U . . . B 2 29.27 -17.544 25.808 1 42.8 ? NAN 79U 601 A 1 HETATM 15 C CAO 79U . . . B 2 28.481 -18.54 24.007 1 43.3 ? CAO 79U 601 A 1 HETATM 16 C CAP 79U . . . B 2 28.239 -19.121 22.78 1 39.27 ? CAP 79U 601 A 1 HETATM 17 C CAQ 79U . . . B 2 26.943 -19.599 22.455 1 40.27 ? CAQ 79U 601 A 1 HETATM 18 C CAR 79U . . . B 2 26.685 -20.169 21.183 1 40.83 ? CAR 79U 601 A 1 HETATM 19 O OAS 79U . . . B 2 25.949 -19.566 20.41 1 43.53 ? OAS 79U 601 A 1 HETATM 20 N NAT 79U . . . B 2 27.291 -21.322 20.792 1 43.8 ? NAT 79U 601 A 1 HETATM 21 C CAV 79U . . . B 2 27.036 -21.802 19.424 1 36.43 ? CAV 79U 601 A 1 HETATM 22 C CAU 79U . . . B 2 28.084 -22.183 21.729 1 43.68 ? CAU 79U 601 A 1 HETATM 23 C CAW 79U . . . B 2 25.898 -19.393 23.388 1 34.95 ? CAW 79U 601 A 1 HETATM 24 C CAX 79U . . . B 2 26.225 -18.763 24.603 1 35.55 ? CAX 79U 601 A 1 HETATM 25 C CAY 79U . . . B 2 27.484 -18.364 24.921 1 41.45 ? CAY 79U 601 A 1 HETATM 26 N NAZ 79U . . . B 2 28.035 -17.785 26.054 1 43.56 ? NAZ 79U 601 A 1 HETATM 27 C CBA 79U . . . B 2 27.405 -17.39 27.201 1 41.64 ? CBA 79U 601 A 1 HETATM 28 C CBB 79U . . . B 2 26.381 -18.157 27.808 1 36.5 ? CBB 79U 601 A 1 HETATM 29 C CBC 79U . . . B 2 25.739 -17.711 28.954 1 35.8 ? CBC 79U 601 A 1 HETATM 30 C CBD 79U . . . B 2 26.085 -16.482 29.563 1 42.95 ? CBD 79U 601 A 1 HETATM 31 C CBE 79U . . . B 2 25.401 -16.029 30.75 1 47.97 ? CBE 79U 601 A 1 HETATM 32 O OBG 79U . . . B 2 25.601 -14.879 31.239 1 49.81 ? OBG 79U 601 A 1 HETATM 33 O OBF 79U . . . B 2 24.474 -16.711 31.258 1 45.17 ? OBF 79U 601 A 1 HETATM 34 C CBH 79U . . . B 2 27.132 -15.731 28.991 1 36.25 ? CBH 79U 601 A 1 HETATM 35 C CBI 79U . . . B 2 27.771 -16.17 27.82 1 40.07 ? CBI 79U 601 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 35 #