data_5LYC
#
_model_server_result.job_id            w40gQPuVMtc2mnhrKfDg-A 
_model_server_result.datetime_utc      '2024-11-18 03:50:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lyc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":203}' 
#
_entry.id    5LYC 
#
_exptl.entry_id    5LYC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LYC 
_cell.length_a            54.57 
_cell.length_b            54.57 
_cell.length_c            208.01 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LYC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? 
covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? 
covale ? covale3 B SG CYS 19 B CYS 14 1_555 G CAB HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
covale ? covale4 B SG CYS 22 B CYS 17 1_555 G CAC HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? 
metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc3 B NE2 HIS 23 B HIS 18 1_555 G FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc4 B SD MET 85 B MET 80 1_555 G FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 494 n n 
S O2 SO4 doub 495 n n 
S O3 SO4 sing 496 n n 
S O4 SO4 sing 497 n n 
#
_atom_sites.entry_id                     5LYC 
_atom_sites.fract_transf_matrix[1][1]    0.018325 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018325 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004807 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEC A 1 201 201 HEC HEM . 
D 3 7AZ A 1 202 202 7AZ PC6 . 
E 4 SO4 A 1 203 1 SO4 SO4 . 
F 4 SO4 A 1 204 2 SO4 SO4 . 
G 2 HEC B 1 201 201 HEC HEM . 
H 3 7AZ B 1 202 202 7AZ PC6 . 
I 4 SO4 B 1 203 3 SO4 SO4 . 
J 4 SO4 B 1 204 4 SO4 SO4 . 
K 4 SO4 B 1 205 5 SO4 SO4 . 
L 5 HOH A 1 301 179 HOH HOH . 
L 5 HOH A 2 302 34 HOH HOH . 
L 5 HOH A 3 303 171 HOH HOH . 
L 5 HOH A 4 304 76 HOH HOH . 
L 5 HOH A 5 305 144 HOH HOH . 
L 5 HOH A 6 306 15 HOH HOH . 
L 5 HOH A 7 307 162 HOH HOH . 
L 5 HOH A 8 308 142 HOH HOH . 
L 5 HOH A 9 309 89 HOH HOH . 
L 5 HOH A 10 310 35 HOH HOH . 
L 5 HOH A 11 311 86 HOH HOH . 
L 5 HOH A 12 312 63 HOH HOH . 
L 5 HOH A 13 313 115 HOH HOH . 
L 5 HOH A 14 314 157 HOH HOH . 
L 5 HOH A 15 315 141 HOH HOH . 
L 5 HOH A 16 316 49 HOH HOH . 
L 5 HOH A 17 317 124 HOH HOH . 
L 5 HOH A 18 318 114 HOH HOH . 
L 5 HOH A 19 319 33 HOH HOH . 
L 5 HOH A 20 320 147 HOH HOH . 
L 5 HOH A 21 321 29 HOH HOH . 
L 5 HOH A 22 322 41 HOH HOH . 
L 5 HOH A 23 323 104 HOH HOH . 
L 5 HOH A 24 324 8 HOH HOH . 
L 5 HOH A 25 325 93 HOH HOH . 
L 5 HOH A 26 326 64 HOH HOH . 
L 5 HOH A 27 327 32 HOH HOH . 
L 5 HOH A 28 328 166 HOH HOH . 
L 5 HOH A 29 329 164 HOH HOH . 
L 5 HOH A 30 330 119 HOH HOH . 
L 5 HOH A 31 331 150 HOH HOH . 
L 5 HOH A 32 332 14 HOH HOH . 
L 5 HOH A 33 333 40 HOH HOH . 
L 5 HOH A 34 334 125 HOH HOH . 
L 5 HOH A 35 335 7 HOH HOH . 
L 5 HOH A 36 336 101 HOH HOH . 
L 5 HOH A 37 337 98 HOH HOH . 
L 5 HOH A 38 338 43 HOH HOH . 
L 5 HOH A 39 339 158 HOH HOH . 
L 5 HOH A 40 340 145 HOH HOH . 
L 5 HOH A 41 341 13 HOH HOH . 
L 5 HOH A 42 342 106 HOH HOH . 
L 5 HOH A 43 343 95 HOH HOH . 
L 5 HOH A 44 344 67 HOH HOH . 
L 5 HOH A 45 345 54 HOH HOH . 
L 5 HOH A 46 346 66 HOH HOH . 
L 5 HOH A 47 347 74 HOH HOH . 
L 5 HOH A 48 348 96 HOH HOH . 
L 5 HOH A 49 349 18 HOH HOH . 
L 5 HOH A 50 350 85 HOH HOH . 
L 5 HOH A 51 351 2 HOH HOH . 
L 5 HOH A 52 352 102 HOH HOH . 
L 5 HOH A 53 353 52 HOH HOH . 
L 5 HOH A 54 354 105 HOH HOH . 
L 5 HOH A 55 355 30 HOH HOH . 
L 5 HOH A 56 356 160 HOH HOH . 
L 5 HOH A 57 357 58 HOH HOH . 
L 5 HOH A 58 358 103 HOH HOH . 
L 5 HOH A 59 359 120 HOH HOH . 
L 5 HOH A 60 360 19 HOH HOH . 
L 5 HOH A 61 361 70 HOH HOH . 
L 5 HOH A 62 362 25 HOH HOH . 
L 5 HOH A 63 363 159 HOH HOH . 
L 5 HOH A 64 364 127 HOH HOH . 
L 5 HOH A 65 365 77 HOH HOH . 
L 5 HOH A 66 366 50 HOH HOH . 
L 5 HOH A 67 367 10 HOH HOH . 
L 5 HOH A 68 368 82 HOH HOH . 
L 5 HOH A 69 369 39 HOH HOH . 
L 5 HOH A 70 370 28 HOH HOH . 
L 5 HOH A 71 371 60 HOH HOH . 
L 5 HOH A 72 372 57 HOH HOH . 
L 5 HOH A 73 373 146 HOH HOH . 
L 5 HOH A 74 374 55 HOH HOH . 
L 5 HOH A 75 375 99 HOH HOH . 
L 5 HOH A 76 376 75 HOH HOH . 
L 5 HOH A 77 377 90 HOH HOH . 
L 5 HOH A 78 378 48 HOH HOH . 
L 5 HOH A 79 379 176 HOH HOH . 
L 5 HOH A 80 380 151 HOH HOH . 
L 5 HOH A 81 381 116 HOH HOH . 
L 5 HOH A 82 382 175 HOH HOH . 
L 5 HOH A 83 383 136 HOH HOH . 
L 5 HOH A 84 384 133 HOH HOH . 
L 5 HOH A 85 385 122 HOH HOH . 
L 5 HOH A 86 386 173 HOH HOH . 
L 5 HOH A 87 387 68 HOH HOH . 
L 5 HOH A 88 388 16 HOH HOH . 
L 5 HOH A 89 389 112 HOH HOH . 
L 5 HOH A 90 390 180 HOH HOH . 
L 5 HOH A 91 391 153 HOH HOH . 
L 5 HOH A 92 392 152 HOH HOH . 
L 5 HOH A 93 393 135 HOH HOH . 
M 5 HOH B 1 301 21 HOH HOH . 
M 5 HOH B 2 302 36 HOH HOH . 
M 5 HOH B 3 303 148 HOH HOH . 
M 5 HOH B 4 304 140 HOH HOH . 
M 5 HOH B 5 305 161 HOH HOH . 
M 5 HOH B 6 306 126 HOH HOH . 
M 5 HOH B 7 307 80 HOH HOH . 
M 5 HOH B 8 308 121 HOH HOH . 
M 5 HOH B 9 309 31 HOH HOH . 
M 5 HOH B 10 310 149 HOH HOH . 
M 5 HOH B 11 311 110 HOH HOH . 
M 5 HOH B 12 312 94 HOH HOH . 
M 5 HOH B 13 313 5 HOH HOH . 
M 5 HOH B 14 314 79 HOH HOH . 
M 5 HOH B 15 315 138 HOH HOH . 
M 5 HOH B 16 316 46 HOH HOH . 
M 5 HOH B 17 317 118 HOH HOH . 
M 5 HOH B 18 318 165 HOH HOH . 
M 5 HOH B 19 319 108 HOH HOH . 
M 5 HOH B 20 320 56 HOH HOH . 
M 5 HOH B 21 321 47 HOH HOH . 
M 5 HOH B 22 322 62 HOH HOH . 
M 5 HOH B 23 323 71 HOH HOH . 
M 5 HOH B 24 324 88 HOH HOH . 
M 5 HOH B 25 325 27 HOH HOH . 
M 5 HOH B 26 326 168 HOH HOH . 
M 5 HOH B 27 327 143 HOH HOH . 
M 5 HOH B 28 328 12 HOH HOH . 
M 5 HOH B 29 329 113 HOH HOH . 
M 5 HOH B 30 330 20 HOH HOH . 
M 5 HOH B 31 331 109 HOH HOH . 
M 5 HOH B 32 332 61 HOH HOH . 
M 5 HOH B 33 333 163 HOH HOH . 
M 5 HOH B 34 334 170 HOH HOH . 
M 5 HOH B 35 335 6 HOH HOH . 
M 5 HOH B 36 336 17 HOH HOH . 
M 5 HOH B 37 337 24 HOH HOH . 
M 5 HOH B 38 338 3 HOH HOH . 
M 5 HOH B 39 339 1 HOH HOH . 
M 5 HOH B 40 340 9 HOH HOH . 
M 5 HOH B 41 341 42 HOH HOH . 
M 5 HOH B 42 342 83 HOH HOH . 
M 5 HOH B 43 343 45 HOH HOH . 
M 5 HOH B 44 344 78 HOH HOH . 
M 5 HOH B 45 345 107 HOH HOH . 
M 5 HOH B 46 346 81 HOH HOH . 
M 5 HOH B 47 347 128 HOH HOH . 
M 5 HOH B 48 348 100 HOH HOH . 
M 5 HOH B 49 349 22 HOH HOH . 
M 5 HOH B 50 350 97 HOH HOH . 
M 5 HOH B 51 351 156 HOH HOH . 
M 5 HOH B 52 352 111 HOH HOH . 
M 5 HOH B 53 353 117 HOH HOH . 
M 5 HOH B 54 354 44 HOH HOH . 
M 5 HOH B 55 355 4 HOH HOH . 
M 5 HOH B 56 356 11 HOH HOH . 
M 5 HOH B 57 357 51 HOH HOH . 
M 5 HOH B 58 358 174 HOH HOH . 
M 5 HOH B 59 359 53 HOH HOH . 
M 5 HOH B 60 360 123 HOH HOH . 
M 5 HOH B 61 361 23 HOH HOH . 
M 5 HOH B 62 362 178 HOH HOH . 
M 5 HOH B 63 363 65 HOH HOH . 
M 5 HOH B 64 364 84 HOH HOH . 
M 5 HOH B 65 365 129 HOH HOH . 
M 5 HOH B 66 366 72 HOH HOH . 
M 5 HOH B 67 367 38 HOH HOH . 
M 5 HOH B 68 368 92 HOH HOH . 
M 5 HOH B 69 369 26 HOH HOH . 
M 5 HOH B 70 370 73 HOH HOH . 
M 5 HOH B 71 371 59 HOH HOH . 
M 5 HOH B 72 372 37 HOH HOH . 
M 5 HOH B 73 373 134 HOH HOH . 
M 5 HOH B 74 374 91 HOH HOH . 
M 5 HOH B 75 375 131 HOH HOH . 
M 5 HOH B 76 376 155 HOH HOH . 
M 5 HOH B 77 377 130 HOH HOH . 
M 5 HOH B 78 378 172 HOH HOH . 
M 5 HOH B 79 379 137 HOH HOH . 
M 5 HOH B 80 380 132 HOH HOH . 
M 5 HOH B 81 381 177 HOH HOH . 
M 5 HOH B 82 382 169 HOH HOH . 
M 5 HOH B 83 383 87 HOH HOH . 
M 5 HOH B 84 384 154 HOH HOH . 
M 5 HOH B 85 385 69 HOH HOH . 
M 5 HOH B 86 386 139 HOH HOH . 
M 5 HOH B 87 387 167 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . I 4 13.77 -34.637 -29.54 0.8 65.51 ? S SO4 203 B 1 
HETATM 2 O O1 SO4 . . . I 4 13.722 -36.116 -29.614 0.8 61 ? O1 SO4 203 B 1 
HETATM 3 O O2 SO4 . . . I 4 13.42 -34.072 -30.852 0.8 63 ? O2 SO4 203 B 1 
HETATM 4 O O3 SO4 . . . I 4 15.144 -34.191 -29.202 0.8 66.91 ? O3 SO4 203 B 1 
HETATM 5 O O4 SO4 . . . I 4 12.805 -34.13 -28.535 0.8 58.66 ? O4 SO4 203 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#