data_5M11 # _model_server_result.job_id qwzJhlOjtScnxTMLFPIDuA _model_server_result.datetime_utc '2024-10-11 03:14:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m11 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 5M11 # _exptl.entry_id 5M11 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5M11 _cell.length_a 115.52 _cell.length_b 115.52 _cell.length_c 139.88 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M11 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 134 A ASP 152 1_555 I ZN ZN . A ZN 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc2 A OE2 GLU 137 A GLU 155 1_555 I ZN ZN . A ZN 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc3 A OE1 GLU 226 A GLU 244 1_555 I ZN ZN . A ZN 808 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? metalc ? metalc4 A OD2 ASP 315 A ASP 333 1_555 H ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc5 A OE1 GLU 318 A GLU 336 1_555 F ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc6 A OE2 GLU 318 A GLU 336 1_555 F ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc7 A ND1 HIS 323 A HIS 341 1_555 J ZN ZN . A ZN 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc8 A NE2 HIS 340 A HIS 358 1_555 H ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc9 A OD1 ASP 382 A ASP 400 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc10 A OD2 ASP 382 A ASP 400 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc11 A OD2 ASP 384 A ASP 402 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc12 A NZ LYS 399 A LYS 417 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc13 A OD1 ASP 450 A ASP 468 1_555 M CA CA . A CA 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc14 A OD2 ASP 450 A ASP 468 1_555 M CA CA . A CA 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc15 A NE2 HIS 457 A HIS 475 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc16 A OD1 ASP 463 A ASP 481 1_555 G ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc17 A OD2 ASP 463 A ASP 481 1_555 G ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc18 A O ASP 502 A ASP 520 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc19 A O THR 505 A THR 523 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc20 A OG1 THR 505 A THR 523 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc21 A O THR 508 A THR 526 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc22 A OD1 ASP 511 A ASP 529 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc23 A OD1 ASP 512 A ASP 530 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc24 A NE2 HIS 514 A HIS 532 1_555 G ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc25 A NE2 HIS 600 A HIS 618 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc26 A OD2 ASP 644 A ASP 662 1_555 D ZN ZN . A ZN 803 7_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc27 A OD1 ASP 654 A ASP 672 1_555 L CA CA . A CA 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.191 ? metalc ? metalc28 A OD2 ASP 654 A ASP 672 1_555 L CA CA . A CA 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc29 A OE1 GLU 670 A GLU 688 1_555 K CA CA . A CA 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc30 A OE2 GLU 670 A GLU 688 1_555 K CA CA . A CA 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc31 A OD2 ASP 743 A ASP 761 1_555 K CA CA . A CA 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc32 E ZN ZN . A ZN 804 1_555 S O2 GOL . A GOL 818 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc33 E ZN ZN . A ZN 804 1_555 S O1 GOL . A GOL 818 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc34 E ZN ZN . A ZN 804 1_555 V O HOH . A HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc35 F ZN ZN . A ZN 805 1_555 R O1 GOL . A GOL 817 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc36 F ZN ZN . A ZN 805 1_555 R O2 GOL . A GOL 817 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc37 F ZN ZN . A ZN 805 1_555 V O HOH . A HOH 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc38 G ZN ZN . A ZN 806 1_555 V O HOH . A HOH 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc39 G ZN ZN . A ZN 806 1_555 V O HOH . A HOH 939 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc40 H ZN ZN . A ZN 807 1_555 T O2 GOL . A GOL 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc41 H ZN ZN . A ZN 807 1_555 T O3 GOL . A GOL 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc42 J ZN ZN . A ZN 809 1_555 N O2 CAC . A CAC 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc43 J ZN ZN . A ZN 809 1_555 N O1 CAC . A CAC 813 7_556 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5M11 _atom_sites.fract_transf_matrix[1][1] 0.008657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008657 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007149 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 801 999 CA CA . C 3 ZN A 1 802 1 ZN ZN . D 3 ZN A 1 803 2 ZN ZN . E 3 ZN A 1 804 3 ZN ZN . F 3 ZN A 1 805 4 ZN ZN . G 3 ZN A 1 806 5 ZN ZN . H 3 ZN A 1 807 6 ZN ZN . I 3 ZN A 1 808 7 ZN ZN . J 3 ZN A 1 809 8 ZN ZN . K 2 CA A 1 810 9 CA CA . L 2 CA A 1 811 10 CA CA . M 2 CA A 1 812 11 CA CA . N 4 CAC A 1 813 12 CAC CAC . O 5 CL A 1 814 13 CL CL . P 6 PG4 A 1 815 14 PG4 PG4 . Q 7 PEG A 1 816 15 PEG PEG . R 8 GOL A 1 817 16 GOL GOL . S 8 GOL A 1 818 17 GOL GOL . T 8 GOL A 1 819 18 GOL GOL . U 8 GOL A 1 820 19 GOL GOL . V 9 HOH A 1 901 25 HOH HOH . V 9 HOH A 2 902 52 HOH HOH . V 9 HOH A 3 903 26 HOH HOH . V 9 HOH A 4 904 48 HOH HOH . V 9 HOH A 5 905 39 HOH HOH . V 9 HOH A 6 906 49 HOH HOH . V 9 HOH A 7 907 50 HOH HOH . V 9 HOH A 8 908 23 HOH HOH . V 9 HOH A 9 909 38 HOH HOH . V 9 HOH A 10 910 35 HOH HOH . V 9 HOH A 11 911 21 HOH HOH . V 9 HOH A 12 912 47 HOH HOH . V 9 HOH A 13 913 37 HOH HOH . V 9 HOH A 14 914 43 HOH HOH . V 9 HOH A 15 915 56 HOH HOH . V 9 HOH A 16 916 31 HOH HOH . V 9 HOH A 17 917 28 HOH HOH . V 9 HOH A 18 918 41 HOH HOH . V 9 HOH A 19 919 42 HOH HOH . V 9 HOH A 20 920 34 HOH HOH . V 9 HOH A 21 921 29 HOH HOH . V 9 HOH A 22 922 24 HOH HOH . V 9 HOH A 23 923 27 HOH HOH . V 9 HOH A 24 924 58 HOH HOH . V 9 HOH A 25 925 30 HOH HOH . V 9 HOH A 26 926 44 HOH HOH . V 9 HOH A 27 927 32 HOH HOH . V 9 HOH A 28 928 36 HOH HOH . V 9 HOH A 29 929 45 HOH HOH . V 9 HOH A 30 930 61 HOH HOH . V 9 HOH A 31 931 33 HOH HOH . V 9 HOH A 32 932 59 HOH HOH . V 9 HOH A 33 933 46 HOH HOH . V 9 HOH A 34 934 20 HOH HOH . V 9 HOH A 35 935 54 HOH HOH . V 9 HOH A 36 936 57 HOH HOH . V 9 HOH A 37 937 51 HOH HOH . V 9 HOH A 38 938 55 HOH HOH . V 9 HOH A 39 939 22 HOH HOH . V 9 HOH A 40 940 53 HOH HOH . V 9 HOH A 41 941 62 HOH HOH . V 9 HOH A 42 942 40 HOH HOH . V 9 HOH A 43 943 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 74.679 _atom_site.Cartn_y 83.736 _atom_site.Cartn_z 93.901 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 113.72 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #