data_5M2C # _model_server_result.job_id aC2aF61l5_ITRmcfAxYJVA _model_server_result.datetime_utc '2024-12-22 06:17:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m2c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5M2C # _exptl.entry_id 5M2C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5M2C _cell.length_a 49.879 _cell.length_b 49.879 _cell.length_c 132.439 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M2C _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 47 A CYS 156 1_555 A SG CYS 81 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf2 A SG CYS 48 A CYS 157 1_555 A SG CYS 66 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf3 B SG CYS 47 B CYS 156 1_555 B SG CYS 81 B CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 B SG CYS 48 B CYS 157 1_555 B SG CYS 66 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 215 n n P O2 PO4 sing 216 n n P O3 PO4 sing 217 n n P O4 PO4 sing 218 n n # _atom_sites.entry_id 5M2C _atom_sites.fract_transf_matrix[1][1] 0.020049 _atom_sites.fract_transf_matrix[1][2] 0.011575 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 301 1 PO4 PO4 . D 2 PO4 B 1 301 2 PO4 PO4 . E 3 HOH A 1 401 14 HOH HOH . E 3 HOH A 2 402 7 HOH HOH . E 3 HOH A 3 403 34 HOH HOH . E 3 HOH A 4 404 1 HOH HOH . E 3 HOH A 5 405 16 HOH HOH . E 3 HOH A 6 406 9 HOH HOH . E 3 HOH A 7 407 6 HOH HOH . E 3 HOH A 8 408 2 HOH HOH . E 3 HOH A 9 409 4 HOH HOH . E 3 HOH A 10 410 11 HOH HOH . E 3 HOH A 11 411 25 HOH HOH . E 3 HOH A 12 412 26 HOH HOH . E 3 HOH A 13 413 30 HOH HOH . E 3 HOH A 14 414 24 HOH HOH . E 3 HOH A 15 415 13 HOH HOH . E 3 HOH A 16 416 23 HOH HOH . E 3 HOH A 17 417 15 HOH HOH . F 3 HOH B 1 401 35 HOH HOH . F 3 HOH B 2 402 31 HOH HOH . F 3 HOH B 3 403 32 HOH HOH . F 3 HOH B 4 404 10 HOH HOH . F 3 HOH B 5 405 8 HOH HOH . F 3 HOH B 6 406 21 HOH HOH . F 3 HOH B 7 407 3 HOH HOH . F 3 HOH B 8 408 5 HOH HOH . F 3 HOH B 9 409 27 HOH HOH . F 3 HOH B 10 410 22 HOH HOH . F 3 HOH B 11 411 33 HOH HOH . F 3 HOH B 12 412 28 HOH HOH . F 3 HOH B 13 413 29 HOH HOH . F 3 HOH B 14 414 17 HOH HOH . F 3 HOH B 15 415 12 HOH HOH . F 3 HOH B 16 416 18 HOH HOH . F 3 HOH B 17 417 19 HOH HOH . F 3 HOH B 18 418 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 -14.094 -6.809 -1.767 1 109.35 ? P PO4 301 A 1 HETATM 2 O O1 PO4 . . . C 2 -14.513 -5.512 -2.416 1 113.26 ? O1 PO4 301 A 1 HETATM 3 O O2 PO4 . . . C 2 -12.624 -7.047 -2.03 1 103.63 ? O2 PO4 301 A 1 HETATM 4 O O3 PO4 . . . C 2 -14.921 -7.945 -2.332 1 103.88 ? O3 PO4 301 A 1 HETATM 5 O O4 PO4 . . . C 2 -14.319 -6.707 -0.278 1 108.34 ? O4 PO4 301 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #