data_5M4C
#
_model_server_result.job_id            vP3iWbVXb3wkMgnMifN5zw 
_model_server_result.datetime_utc      '2024-10-13 03:23:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5m4c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    5M4C 
#
_exptl.entry_id    5M4C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5M4C 
_cell.length_a            48.104 
_cell.length_b            79.418 
_cell.length_c            82.341 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5M4C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 167 n n 
C1 C2 GOL sing 168 n n 
C1 H11 GOL sing 169 n n 
C1 H12 GOL sing 170 n n 
O1 HO1 GOL sing 171 n n 
C2 O2 GOL sing 172 n n 
C2 C3 GOL sing 173 n n 
C2 H2 GOL sing 174 n n 
O2 HO2 GOL sing 175 n n 
C3 O3 GOL sing 176 n n 
C3 H31 GOL sing 177 n n 
C3 H32 GOL sing 178 n n 
O3 HO3 GOL sing 179 n n 
#
_atom_sites.entry_id                     5M4C 
_atom_sites.fract_transf_matrix[1][1]    0.020788 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012592 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012145 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 7EY A 1 401 1 7EY DRG . 
C 3 CL A 1 402 2 CL CL . 
D 4 GOL A 1 403 3 GOL GOL . 
E 4 GOL A 1 404 4 GOL GOL . 
F 5 HOH A 1 501 165 HOH HOH . 
F 5 HOH A 2 502 33 HOH HOH . 
F 5 HOH A 3 503 91 HOH HOH . 
F 5 HOH A 4 504 88 HOH HOH . 
F 5 HOH A 5 505 214 HOH HOH . 
F 5 HOH A 6 506 31 HOH HOH . 
F 5 HOH A 7 507 23 HOH HOH . 
F 5 HOH A 8 508 181 HOH HOH . 
F 5 HOH A 9 509 220 HOH HOH . 
F 5 HOH A 10 510 46 HOH HOH . 
F 5 HOH A 11 511 216 HOH HOH . 
F 5 HOH A 12 512 151 HOH HOH . 
F 5 HOH A 13 513 66 HOH HOH . 
F 5 HOH A 14 514 98 HOH HOH . 
F 5 HOH A 15 515 50 HOH HOH . 
F 5 HOH A 16 516 6 HOH HOH . 
F 5 HOH A 17 517 163 HOH HOH . 
F 5 HOH A 18 518 187 HOH HOH . 
F 5 HOH A 19 519 134 HOH HOH . 
F 5 HOH A 20 520 188 HOH HOH . 
F 5 HOH A 21 521 71 HOH HOH . 
F 5 HOH A 22 522 93 HOH HOH . 
F 5 HOH A 23 523 11 HOH HOH . 
F 5 HOH A 24 524 30 HOH HOH . 
F 5 HOH A 25 525 115 HOH HOH . 
F 5 HOH A 26 526 117 HOH HOH . 
F 5 HOH A 27 527 121 HOH HOH . 
F 5 HOH A 28 528 101 HOH HOH . 
F 5 HOH A 29 529 69 HOH HOH . 
F 5 HOH A 30 530 127 HOH HOH . 
F 5 HOH A 31 531 59 HOH HOH . 
F 5 HOH A 32 532 83 HOH HOH . 
F 5 HOH A 33 533 237 HOH HOH . 
F 5 HOH A 34 534 159 HOH HOH . 
F 5 HOH A 35 535 94 HOH HOH . 
F 5 HOH A 36 536 212 HOH HOH . 
F 5 HOH A 37 537 234 HOH HOH . 
F 5 HOH A 38 538 37 HOH HOH . 
F 5 HOH A 39 539 153 HOH HOH . 
F 5 HOH A 40 540 27 HOH HOH . 
F 5 HOH A 41 541 64 HOH HOH . 
F 5 HOH A 42 542 29 HOH HOH . 
F 5 HOH A 43 543 42 HOH HOH . 
F 5 HOH A 44 544 229 HOH HOH . 
F 5 HOH A 45 545 22 HOH HOH . 
F 5 HOH A 46 546 161 HOH HOH . 
F 5 HOH A 47 547 173 HOH HOH . 
F 5 HOH A 48 548 5 HOH HOH . 
F 5 HOH A 49 549 47 HOH HOH . 
F 5 HOH A 50 550 228 HOH HOH . 
F 5 HOH A 51 551 95 HOH HOH . 
F 5 HOH A 52 552 12 HOH HOH . 
F 5 HOH A 53 553 58 HOH HOH . 
F 5 HOH A 54 554 138 HOH HOH . 
F 5 HOH A 55 555 41 HOH HOH . 
F 5 HOH A 56 556 78 HOH HOH . 
F 5 HOH A 57 557 102 HOH HOH . 
F 5 HOH A 58 558 61 HOH HOH . 
F 5 HOH A 59 559 195 HOH HOH . 
F 5 HOH A 60 560 74 HOH HOH . 
F 5 HOH A 61 561 70 HOH HOH . 
F 5 HOH A 62 562 172 HOH HOH . 
F 5 HOH A 63 563 112 HOH HOH . 
F 5 HOH A 64 564 7 HOH HOH . 
F 5 HOH A 65 565 119 HOH HOH . 
F 5 HOH A 66 566 152 HOH HOH . 
F 5 HOH A 67 567 176 HOH HOH . 
F 5 HOH A 68 568 28 HOH HOH . 
F 5 HOH A 69 569 107 HOH HOH . 
F 5 HOH A 70 570 97 HOH HOH . 
F 5 HOH A 71 571 156 HOH HOH . 
F 5 HOH A 72 572 240 HOH HOH . 
F 5 HOH A 73 573 169 HOH HOH . 
F 5 HOH A 74 574 21 HOH HOH . 
F 5 HOH A 75 575 19 HOH HOH . 
F 5 HOH A 76 576 139 HOH HOH . 
F 5 HOH A 77 577 120 HOH HOH . 
F 5 HOH A 78 578 96 HOH HOH . 
F 5 HOH A 79 579 14 HOH HOH . 
F 5 HOH A 80 580 35 HOH HOH . 
F 5 HOH A 81 581 13 HOH HOH . 
F 5 HOH A 82 582 17 HOH HOH . 
F 5 HOH A 83 583 227 HOH HOH . 
F 5 HOH A 84 584 32 HOH HOH . 
F 5 HOH A 85 585 81 HOH HOH . 
F 5 HOH A 86 586 38 HOH HOH . 
F 5 HOH A 87 587 57 HOH HOH . 
F 5 HOH A 88 588 48 HOH HOH . 
F 5 HOH A 89 589 99 HOH HOH . 
F 5 HOH A 90 590 75 HOH HOH . 
F 5 HOH A 91 591 4 HOH HOH . 
F 5 HOH A 92 592 140 HOH HOH . 
F 5 HOH A 93 593 192 HOH HOH . 
F 5 HOH A 94 594 142 HOH HOH . 
F 5 HOH A 95 595 223 HOH HOH . 
F 5 HOH A 96 596 16 HOH HOH . 
F 5 HOH A 97 597 25 HOH HOH . 
F 5 HOH A 98 598 146 HOH HOH . 
F 5 HOH A 99 599 186 HOH HOH . 
F 5 HOH A 100 600 149 HOH HOH . 
F 5 HOH A 101 601 36 HOH HOH . 
F 5 HOH A 102 602 109 HOH HOH . 
F 5 HOH A 103 603 77 HOH HOH . 
F 5 HOH A 104 604 3 HOH HOH . 
F 5 HOH A 105 605 9 HOH HOH . 
F 5 HOH A 106 606 206 HOH HOH . 
F 5 HOH A 107 607 217 HOH HOH . 
F 5 HOH A 108 608 86 HOH HOH . 
F 5 HOH A 109 609 118 HOH HOH . 
F 5 HOH A 110 610 24 HOH HOH . 
F 5 HOH A 111 611 62 HOH HOH . 
F 5 HOH A 112 612 80 HOH HOH . 
F 5 HOH A 113 613 60 HOH HOH . 
F 5 HOH A 114 614 39 HOH HOH . 
F 5 HOH A 115 615 20 HOH HOH . 
F 5 HOH A 116 616 106 HOH HOH . 
F 5 HOH A 117 617 225 HOH HOH . 
F 5 HOH A 118 618 26 HOH HOH . 
F 5 HOH A 119 619 108 HOH HOH . 
F 5 HOH A 120 620 43 HOH HOH . 
F 5 HOH A 121 621 133 HOH HOH . 
F 5 HOH A 122 622 147 HOH HOH . 
F 5 HOH A 123 623 34 HOH HOH . 
F 5 HOH A 124 624 103 HOH HOH . 
F 5 HOH A 125 625 52 HOH HOH . 
F 5 HOH A 126 626 8 HOH HOH . 
F 5 HOH A 127 627 2 HOH HOH . 
F 5 HOH A 128 628 49 HOH HOH . 
F 5 HOH A 129 629 175 HOH HOH . 
F 5 HOH A 130 630 221 HOH HOH . 
F 5 HOH A 131 631 40 HOH HOH . 
F 5 HOH A 132 632 145 HOH HOH . 
F 5 HOH A 133 633 136 HOH HOH . 
F 5 HOH A 134 634 203 HOH HOH . 
F 5 HOH A 135 635 67 HOH HOH . 
F 5 HOH A 136 636 137 HOH HOH . 
F 5 HOH A 137 637 174 HOH HOH . 
F 5 HOH A 138 638 213 HOH HOH . 
F 5 HOH A 139 639 45 HOH HOH . 
F 5 HOH A 140 640 105 HOH HOH . 
F 5 HOH A 141 641 180 HOH HOH . 
F 5 HOH A 142 642 155 HOH HOH . 
F 5 HOH A 143 643 85 HOH HOH . 
F 5 HOH A 144 644 65 HOH HOH . 
F 5 HOH A 145 645 54 HOH HOH . 
F 5 HOH A 146 646 128 HOH HOH . 
F 5 HOH A 147 647 76 HOH HOH . 
F 5 HOH A 148 648 182 HOH HOH . 
F 5 HOH A 149 649 168 HOH HOH . 
F 5 HOH A 150 650 232 HOH HOH . 
F 5 HOH A 151 651 184 HOH HOH . 
F 5 HOH A 152 652 53 HOH HOH . 
F 5 HOH A 153 653 89 HOH HOH . 
F 5 HOH A 154 654 114 HOH HOH . 
F 5 HOH A 155 655 148 HOH HOH . 
F 5 HOH A 156 656 171 HOH HOH . 
F 5 HOH A 157 657 141 HOH HOH . 
F 5 HOH A 158 658 55 HOH HOH . 
F 5 HOH A 159 659 144 HOH HOH . 
F 5 HOH A 160 660 199 HOH HOH . 
F 5 HOH A 161 661 100 HOH HOH . 
F 5 HOH A 162 662 179 HOH HOH . 
F 5 HOH A 163 663 193 HOH HOH . 
F 5 HOH A 164 664 73 HOH HOH . 
F 5 HOH A 165 665 72 HOH HOH . 
F 5 HOH A 166 666 87 HOH HOH . 
F 5 HOH A 167 667 210 HOH HOH . 
F 5 HOH A 168 668 205 HOH HOH . 
F 5 HOH A 169 669 63 HOH HOH . 
F 5 HOH A 170 670 166 HOH HOH . 
F 5 HOH A 171 671 10 HOH HOH . 
F 5 HOH A 172 672 135 HOH HOH . 
F 5 HOH A 173 673 15 HOH HOH . 
F 5 HOH A 174 674 211 HOH HOH . 
F 5 HOH A 175 675 111 HOH HOH . 
F 5 HOH A 176 676 235 HOH HOH . 
F 5 HOH A 177 677 56 HOH HOH . 
F 5 HOH A 178 678 154 HOH HOH . 
F 5 HOH A 179 679 231 HOH HOH . 
F 5 HOH A 180 680 116 HOH HOH . 
F 5 HOH A 181 681 18 HOH HOH . 
F 5 HOH A 182 682 122 HOH HOH . 
F 5 HOH A 183 683 125 HOH HOH . 
F 5 HOH A 184 684 200 HOH HOH . 
F 5 HOH A 185 685 183 HOH HOH . 
F 5 HOH A 186 686 113 HOH HOH . 
F 5 HOH A 187 687 124 HOH HOH . 
F 5 HOH A 188 688 92 HOH HOH . 
F 5 HOH A 189 689 233 HOH HOH . 
F 5 HOH A 190 690 132 HOH HOH . 
F 5 HOH A 191 691 218 HOH HOH . 
F 5 HOH A 192 692 84 HOH HOH . 
F 5 HOH A 193 693 178 HOH HOH . 
F 5 HOH A 194 694 197 HOH HOH . 
F 5 HOH A 195 695 236 HOH HOH . 
F 5 HOH A 196 696 123 HOH HOH . 
F 5 HOH A 197 697 238 HOH HOH . 
F 5 HOH A 198 698 191 HOH HOH . 
F 5 HOH A 199 699 68 HOH HOH . 
F 5 HOH A 200 700 143 HOH HOH . 
F 5 HOH A 201 701 239 HOH HOH . 
F 5 HOH A 202 702 196 HOH HOH . 
F 5 HOH A 203 703 164 HOH HOH . 
F 5 HOH A 204 704 90 HOH HOH . 
F 5 HOH A 205 705 170 HOH HOH . 
F 5 HOH A 206 706 162 HOH HOH . 
F 5 HOH A 207 707 110 HOH HOH . 
F 5 HOH A 208 708 130 HOH HOH . 
F 5 HOH A 209 709 241 HOH HOH . 
F 5 HOH A 210 710 1 HOH HOH . 
F 5 HOH A 211 711 194 HOH HOH . 
F 5 HOH A 212 712 126 HOH HOH . 
F 5 HOH A 213 713 222 HOH HOH . 
F 5 HOH A 214 714 160 HOH HOH . 
F 5 HOH A 215 715 207 HOH HOH . 
F 5 HOH A 216 716 129 HOH HOH . 
F 5 HOH A 217 717 82 HOH HOH . 
F 5 HOH A 218 718 204 HOH HOH . 
F 5 HOH A 219 719 79 HOH HOH . 
F 5 HOH A 220 720 209 HOH HOH . 
F 5 HOH A 221 721 185 HOH HOH . 
F 5 HOH A 222 722 215 HOH HOH . 
F 5 HOH A 223 723 167 HOH HOH . 
F 5 HOH A 224 724 208 HOH HOH . 
F 5 HOH A 225 725 219 HOH HOH . 
F 5 HOH A 226 726 201 HOH HOH . 
F 5 HOH A 227 727 198 HOH HOH . 
F 5 HOH A 228 728 202 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -27.438 -4.375 -17.491 1 44.15 ? C1 GOL 404 A 1 
HETATM 2 O O1 GOL . . . E 4 -27.865 -5.694 -17.761 1 44.16 ? O1 GOL 404 A 1 
HETATM 3 C C2 GOL . . . E 4 -26.024 -4.262 -18.034 1 47.06 ? C2 GOL 404 A 1 
HETATM 4 O O2 GOL . . . E 4 -25.982 -4.867 -19.31 1 49.2 ? O2 GOL 404 A 1 
HETATM 5 C C3 GOL . . . E 4 -25.613 -2.798 -18.108 1 46.38 ? C3 GOL 404 A 1 
HETATM 6 O O3 GOL . . . E 4 -26.345 -2.089 -19.083 1 46.85 ? O3 GOL 404 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           37 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#