data_5M4K # _model_server_result.job_id tRhrIbHwhCAlnib9gm4Isg _model_server_result.datetime_utc '2024-11-22 20:13:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m4k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5M4K # _exptl.entry_id 5M4K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5M4K _cell.length_a 108.092 _cell.length_b 108.092 _cell.length_c 84.441 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M4K _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5M4K _atom_sites.fract_transf_matrix[1][1] 0.009251 _atom_sites.fract_transf_matrix[1][2] 0.005341 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TF3 A 1 401 1367 TF3 PFI . C 3 7F9 A 1 402 1368 7F9 UNL . D 4 MG A 1 403 1369 MG MG . E 5 HOH A 1 501 2060 HOH HOH . E 5 HOH A 2 502 2057 HOH HOH . E 5 HOH A 3 503 2009 HOH HOH . E 5 HOH A 4 504 2058 HOH HOH . E 5 HOH A 5 505 2062 HOH HOH . E 5 HOH A 6 506 2023 HOH HOH . E 5 HOH A 7 507 2008 HOH HOH . E 5 HOH A 8 508 2061 HOH HOH . E 5 HOH A 9 509 2022 HOH HOH . E 5 HOH A 10 510 2001 HOH HOH . E 5 HOH A 11 511 2047 HOH HOH . E 5 HOH A 12 512 2055 HOH HOH . E 5 HOH A 13 513 2053 HOH HOH . E 5 HOH A 14 514 2063 HOH HOH . E 5 HOH A 15 515 2065 HOH HOH . E 5 HOH A 16 516 2059 HOH HOH . E 5 HOH A 17 517 2026 HOH HOH . E 5 HOH A 18 518 2012 HOH HOH . E 5 HOH A 19 519 2010 HOH HOH . E 5 HOH A 20 520 2034 HOH HOH . E 5 HOH A 21 521 2045 HOH HOH . E 5 HOH A 22 522 2027 HOH HOH . E 5 HOH A 23 523 2046 HOH HOH . E 5 HOH A 24 524 2014 HOH HOH . E 5 HOH A 25 525 2017 HOH HOH . E 5 HOH A 26 526 2007 HOH HOH . E 5 HOH A 27 527 2004 HOH HOH . E 5 HOH A 28 528 2056 HOH HOH . E 5 HOH A 29 529 2006 HOH HOH . E 5 HOH A 30 530 2005 HOH HOH . E 5 HOH A 31 531 2036 HOH HOH . E 5 HOH A 32 532 2003 HOH HOH . E 5 HOH A 33 533 2020 HOH HOH . E 5 HOH A 34 534 2048 HOH HOH . E 5 HOH A 35 535 2013 HOH HOH . E 5 HOH A 36 536 2015 HOH HOH . E 5 HOH A 37 537 2029 HOH HOH . E 5 HOH A 38 538 2064 HOH HOH . E 5 HOH A 39 539 2002 HOH HOH . E 5 HOH A 40 540 2038 HOH HOH . E 5 HOH A 41 541 2040 HOH HOH . E 5 HOH A 42 542 2044 HOH HOH . E 5 HOH A 43 543 2037 HOH HOH . E 5 HOH A 44 544 2024 HOH HOH . E 5 HOH A 45 545 2049 HOH HOH . E 5 HOH A 46 546 2042 HOH HOH . E 5 HOH A 47 547 2016 HOH HOH . E 5 HOH A 48 548 2011 HOH HOH . E 5 HOH A 49 549 2050 HOH HOH . E 5 HOH A 50 550 2030 HOH HOH . E 5 HOH A 51 551 2054 HOH HOH . E 5 HOH A 52 552 2052 HOH HOH . E 5 HOH A 53 553 2066 HOH HOH . E 5 HOH A 54 554 2018 HOH HOH . E 5 HOH A 55 555 2039 HOH HOH . E 5 HOH A 56 556 2025 HOH HOH . E 5 HOH A 57 557 2051 HOH HOH . E 5 HOH A 58 558 2031 HOH HOH . E 5 HOH A 59 559 2019 HOH HOH . E 5 HOH A 60 560 2021 HOH HOH . E 5 HOH A 61 561 2035 HOH HOH . E 5 HOH A 62 562 2033 HOH HOH . E 5 HOH A 63 563 2041 HOH HOH . E 5 HOH A 64 564 2043 HOH HOH . E 5 HOH A 65 565 2032 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 29.519 _atom_site.Cartn_y -43.77 _atom_site.Cartn_z 2.827 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #