data_5M4M # _model_server_result.job_id 93imGYbLB4sjkYUrkg7oiA _model_server_result.datetime_utc '2025-08-31 03:13:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m4m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5M4M # _exptl.entry_id 5M4M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 518.563 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[4-[methyl(quinoxalin-6-ylmethyl)carbamoyl]phenyl]-2,4-bis(oxidanyl)-~{N}-(phenylmethyl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5M4M _cell.length_a 108.651 _cell.length_b 108.651 _cell.length_c 83.657 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M4M _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C31 H26 N4 O4' _chem_comp.formula_weight 518.563 _chem_comp.id 7FW _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[4-[methyl(quinoxalin-6-ylmethyl)carbamoyl]phenyl]-2,4-bis(oxidanyl)-~{N}-(phenylmethyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 7FW doub 1 n y C15 C14 7FW sing 2 n y C16 C17 7FW sing 3 n y O8 C3 7FW sing 4 n n C14 C13 7FW doub 5 n y C17 C18 7FW doub 6 n y C3 C2 7FW doub 7 n y C3 C4 7FW sing 8 n y C2 C1 7FW sing 9 n y C13 C18 7FW sing 10 n y C13 C12 7FW sing 11 n n O10 C9 7FW doub 12 n n C9 C4 7FW sing 13 n n C9 N11 7FW sing 14 n n C4 C5 7FW doub 15 n y C12 N11 7FW sing 16 n n N11 C19 7FW sing 17 n n C20 C19 7FW doub 18 n y C20 C21 7FW sing 19 n y C1 O7 7FW sing 20 n n C1 C6 7FW doub 21 n y C19 C24 7FW sing 22 n y C21 C22 7FW doub 23 n y C5 C6 7FW sing 24 n y C24 C23 7FW doub 25 n y C28 N26 7FW sing 26 n n C22 C23 7FW sing 27 n y C22 C25 7FW sing 28 n n N26 C25 7FW sing 29 n n N26 C29 7FW sing 30 n n C25 O27 7FW doub 31 n n C29 C30 7FW sing 32 n n C30 C33 7FW doub 33 n y C30 C32 7FW sing 34 n y C33 C35 7FW sing 35 n y C32 C31 7FW doub 36 n y C35 N36 7FW doub 37 n y C35 C34 7FW sing 38 n y N36 C37 7FW sing 39 n y C31 C34 7FW sing 40 n y C34 N39 7FW doub 41 n y C37 C38 7FW doub 42 n y N39 C38 7FW sing 43 n y C2 H1 7FW sing 44 n n C5 H2 7FW sing 45 n n C6 H3 7FW sing 46 n n O7 H4 7FW sing 47 n n O8 H5 7FW sing 48 n n C12 H6 7FW sing 49 n n C12 H7 7FW sing 50 n n C14 H8 7FW sing 51 n n C15 H9 7FW sing 52 n n C16 H10 7FW sing 53 n n C17 H11 7FW sing 54 n n C18 H12 7FW sing 55 n n C20 H13 7FW sing 56 n n C21 H14 7FW sing 57 n n C23 H15 7FW sing 58 n n C24 H16 7FW sing 59 n n C28 H17 7FW sing 60 n n C28 H18 7FW sing 61 n n C28 H19 7FW sing 62 n n C29 H20 7FW sing 63 n n C29 H21 7FW sing 64 n n C31 H22 7FW sing 65 n n C32 H23 7FW sing 66 n n C33 H24 7FW sing 67 n n C37 H25 7FW sing 68 n n C38 H26 7FW sing 69 n n # _atom_sites.entry_id 5M4M _atom_sites.fract_transf_matrix[1][1] 0.009204 _atom_sites.fract_transf_matrix[1][2] 0.005314 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010628 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7FW A 1 401 1367 7FW UNL . C 3 TF3 A 1 402 1368 TF3 PFI . D 4 CL A 1 403 1369 CL CL . E 4 CL A 1 404 1370 CL CL . F 4 CL A 1 405 1371 CL CL . G 5 HOH A 1 501 2030 HOH HOH . G 5 HOH A 2 502 2097 HOH HOH . G 5 HOH A 3 503 2022 HOH HOH . G 5 HOH A 4 504 2001 HOH HOH . G 5 HOH A 5 505 2064 HOH HOH . G 5 HOH A 6 506 2100 HOH HOH . G 5 HOH A 7 507 2005 HOH HOH . G 5 HOH A 8 508 2006 HOH HOH . G 5 HOH A 9 509 2076 HOH HOH . G 5 HOH A 10 510 2040 HOH HOH . G 5 HOH A 11 511 2101 HOH HOH . G 5 HOH A 12 512 2103 HOH HOH . G 5 HOH A 13 513 2008 HOH HOH . G 5 HOH A 14 514 2004 HOH HOH . G 5 HOH A 15 515 2073 HOH HOH . G 5 HOH A 16 516 2099 HOH HOH . G 5 HOH A 17 517 2046 HOH HOH . G 5 HOH A 18 518 2011 HOH HOH . G 5 HOH A 19 519 2014 HOH HOH . G 5 HOH A 20 520 2107 HOH HOH . G 5 HOH A 21 521 2042 HOH HOH . G 5 HOH A 22 522 2105 HOH HOH . G 5 HOH A 23 523 2106 HOH HOH . G 5 HOH A 24 524 2041 HOH HOH . G 5 HOH A 25 525 2009 HOH HOH . G 5 HOH A 26 526 2094 HOH HOH . G 5 HOH A 27 527 2007 HOH HOH . G 5 HOH A 28 528 2013 HOH HOH . G 5 HOH A 29 529 2102 HOH HOH . G 5 HOH A 30 530 2051 HOH HOH . G 5 HOH A 31 531 2056 HOH HOH . G 5 HOH A 32 532 2057 HOH HOH . G 5 HOH A 33 533 2072 HOH HOH . G 5 HOH A 34 534 2031 HOH HOH . G 5 HOH A 35 535 2002 HOH HOH . G 5 HOH A 36 536 2086 HOH HOH . G 5 HOH A 37 537 2069 HOH HOH . G 5 HOH A 38 538 2026 HOH HOH . G 5 HOH A 39 539 2020 HOH HOH . G 5 HOH A 40 540 2049 HOH HOH . G 5 HOH A 41 541 2055 HOH HOH . G 5 HOH A 42 542 2044 HOH HOH . G 5 HOH A 43 543 2010 HOH HOH . G 5 HOH A 44 544 2017 HOH HOH . G 5 HOH A 45 545 2032 HOH HOH . G 5 HOH A 46 546 2074 HOH HOH . G 5 HOH A 47 547 2066 HOH HOH . G 5 HOH A 48 548 2016 HOH HOH . G 5 HOH A 49 549 2018 HOH HOH . G 5 HOH A 50 550 2075 HOH HOH . G 5 HOH A 51 551 2025 HOH HOH . G 5 HOH A 52 552 2085 HOH HOH . G 5 HOH A 53 553 2054 HOH HOH . G 5 HOH A 54 554 2061 HOH HOH . G 5 HOH A 55 555 2053 HOH HOH . G 5 HOH A 56 556 2071 HOH HOH . G 5 HOH A 57 557 2023 HOH HOH . G 5 HOH A 58 558 2021 HOH HOH . G 5 HOH A 59 559 2068 HOH HOH . G 5 HOH A 60 560 2080 HOH HOH . G 5 HOH A 61 561 2104 HOH HOH . G 5 HOH A 62 562 2028 HOH HOH . G 5 HOH A 63 563 2063 HOH HOH . G 5 HOH A 64 564 2029 HOH HOH . G 5 HOH A 65 565 2070 HOH HOH . G 5 HOH A 66 566 2003 HOH HOH . G 5 HOH A 67 567 2060 HOH HOH . G 5 HOH A 68 568 2012 HOH HOH . G 5 HOH A 69 569 2048 HOH HOH . G 5 HOH A 70 570 2065 HOH HOH . G 5 HOH A 71 571 2035 HOH HOH . G 5 HOH A 72 572 2039 HOH HOH . G 5 HOH A 73 573 2024 HOH HOH . G 5 HOH A 74 574 2037 HOH HOH . G 5 HOH A 75 575 2036 HOH HOH . G 5 HOH A 76 576 2052 HOH HOH . G 5 HOH A 77 577 2050 HOH HOH . G 5 HOH A 78 578 2027 HOH HOH . G 5 HOH A 79 579 2015 HOH HOH . G 5 HOH A 80 580 2078 HOH HOH . G 5 HOH A 81 581 2081 HOH HOH . G 5 HOH A 82 582 2067 HOH HOH . G 5 HOH A 83 583 2038 HOH HOH . G 5 HOH A 84 584 2019 HOH HOH . G 5 HOH A 85 585 2047 HOH HOH . G 5 HOH A 86 586 2033 HOH HOH . G 5 HOH A 87 587 2079 HOH HOH . G 5 HOH A 88 588 2090 HOH HOH . G 5 HOH A 89 589 2034 HOH HOH . G 5 HOH A 90 590 2059 HOH HOH . G 5 HOH A 91 591 2093 HOH HOH . G 5 HOH A 92 592 2045 HOH HOH . G 5 HOH A 93 593 2083 HOH HOH . G 5 HOH A 94 594 2058 HOH HOH . G 5 HOH A 95 595 2077 HOH HOH . G 5 HOH A 96 596 2043 HOH HOH . G 5 HOH A 97 597 2088 HOH HOH . G 5 HOH A 98 598 2095 HOH HOH . G 5 HOH A 99 599 2087 HOH HOH . G 5 HOH A 100 600 2098 HOH HOH . G 5 HOH A 101 601 2091 HOH HOH . G 5 HOH A 102 602 2092 HOH HOH . G 5 HOH A 103 603 2082 HOH HOH . G 5 HOH A 104 604 2096 HOH HOH . G 5 HOH A 105 605 2084 HOH HOH . G 5 HOH A 106 606 2062 HOH HOH . G 5 HOH A 107 607 2089 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7FW . . . B 2 38.812 -45.181 -10.074 1 41.97 ? C1 7FW 401 A 1 HETATM 2 C C2 7FW . . . B 2 38.916 -45.765 -11.303 1 44.86 ? C2 7FW 401 A 1 HETATM 3 C C3 7FW . . . B 2 39.347 -47.056 -11.422 1 44.03 ? C3 7FW 401 A 1 HETATM 4 C C4 7FW . . . B 2 39.678 -47.78 -10.33 1 44.75 ? C4 7FW 401 A 1 HETATM 5 C C5 7FW . . . B 2 39.562 -47.2 -9.084 1 43.78 ? C5 7FW 401 A 1 HETATM 6 C C6 7FW . . . B 2 39.136 -45.895 -8.953 1 40.85 ? C6 7FW 401 A 1 HETATM 7 O O7 7FW . . . B 2 38.395 -43.93 -10.006 1 35.99 ? O7 7FW 401 A 1 HETATM 8 O O8 7FW . . . B 2 39.46 -47.62 -12.611 1 45.43 ? O8 7FW 401 A 1 HETATM 9 C C9 7FW . . . B 2 40.15 -49.212 -10.55 1 44.92 ? C9 7FW 401 A 1 HETATM 10 O O10 7FW . . . B 2 39.374 -49.978 -11.022 1 43.49 ? O10 7FW 401 A 1 HETATM 11 N N11 7FW . . . B 2 41.388 -49.523 -10.251 1 47.12 ? N11 7FW 401 A 1 HETATM 12 C C12 7FW . . . B 2 41.818 -50.886 -10.315 1 52.6 ? C12 7FW 401 A 1 HETATM 13 C C13 7FW . . . B 2 43.031 -51.182 -11.15 1 64.06 ? C13 7FW 401 A 1 HETATM 14 C C14 7FW . . . B 2 42.869 -51.692 -12.406 1 68.91 ? C14 7FW 401 A 1 HETATM 15 C C15 7FW . . . B 2 43.965 -51.946 -13.184 1 72.28 ? C15 7FW 401 A 1 HETATM 16 C C16 7FW . . . B 2 45.216 -51.677 -12.693 1 77.94 ? C16 7FW 401 A 1 HETATM 17 C C17 7FW . . . B 2 45.373 -51.143 -11.438 1 75.68 ? C17 7FW 401 A 1 HETATM 18 C C18 7FW . . . B 2 44.271 -50.891 -10.664 1 66.1 ? C18 7FW 401 A 1 HETATM 19 C C19 7FW . . . B 2 42.088 -48.679 -9.578 1 48.94 ? C19 7FW 401 A 1 HETATM 20 C C20 7FW . . . B 2 42.608 -47.537 -10.128 1 49.8 ? C20 7FW 401 A 1 HETATM 21 C C21 7FW . . . B 2 43.293 -46.632 -9.344 1 48.48 ? C21 7FW 401 A 1 HETATM 22 C C22 7FW . . . B 2 43.378 -46.865 -7.998 1 49.75 ? C22 7FW 401 A 1 HETATM 23 C C23 7FW . . . B 2 42.855 -48.006 -7.467 1 52.33 ? C23 7FW 401 A 1 HETATM 24 C C24 7FW . . . B 2 42.185 -48.904 -8.247 1 53.23 ? C24 7FW 401 A 1 HETATM 25 C C25 7FW . . . B 2 44.135 -45.867 -7.119 1 55.81 ? C25 7FW 401 A 1 HETATM 26 N N26 7FW . . . B 2 45.394 -45.583 -7.206 1 54.13 ? N26 7FW 401 A 1 HETATM 27 O O27 7FW . . . B 2 43.417 -45.4 -6.242 1 50.61 ? O27 7FW 401 A 1 HETATM 28 C C28 7FW . . . B 2 46.246 -46.403 -8.049 1 49.82 ? C28 7FW 401 A 1 HETATM 29 C C29 7FW . . . B 2 45.936 -44.562 -6.278 1 57.03 ? C29 7FW 401 A 1 HETATM 30 C C30 7FW . . . B 2 46.33 -45.172 -4.937 1 60.49 ? C30 7FW 401 A 1 HETATM 31 C C31 7FW . . . B 2 47.054 -44.992 -2.672 1 68.15 ? C31 7FW 401 A 1 HETATM 32 C C32 7FW . . . B 2 46.647 -44.401 -3.846 1 62.41 ? C32 7FW 401 A 1 HETATM 33 C C33 7FW . . . B 2 46.434 -46.529 -4.841 1 67.39 ? C33 7FW 401 A 1 HETATM 34 C C34 7FW . . . B 2 47.147 -46.364 -2.591 1 73.72 ? C34 7FW 401 A 1 HETATM 35 C C35 7FW . . . B 2 46.832 -47.128 -3.685 1 72.09 ? C35 7FW 401 A 1 HETATM 36 N N36 7FW . . . B 2 46.913 -48.455 -3.619 1 76.75 ? N36 7FW 401 A 1 HETATM 37 C C37 7FW . . . B 2 47.292 -49.045 -2.507 1 81.46 ? C37 7FW 401 A 1 HETATM 38 C C38 7FW . . . B 2 47.615 -48.282 -1.396 1 80.88 ? C38 7FW 401 A 1 HETATM 39 N N39 7FW . . . B 2 47.538 -46.972 -1.465 1 71.86 ? N39 7FW 401 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 427 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 39 #