data_5M4P # _model_server_result.job_id MGGNE459c-jpWomWtY37tw _model_server_result.datetime_utc '2024-11-14 03:56:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5M4P # _exptl.entry_id 5M4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.878 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-(2-AMINOETHYL)-2-{3-CHLORO-4-[(4-ISOPROPYLBENZYL)OXY]PHENYL} ACETAMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5M4P _cell.length_a 109.442 _cell.length_b 109.442 _cell.length_c 84.515 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H25 Cl N2 O2' _chem_comp.formula_weight 360.878 _chem_comp.id TF3 _chem_comp.mon_nstd_flag . _chem_comp.name 'N-(2-AMINOETHYL)-2-{3-CHLORO-4-[(4-ISOPROPYLBENZYL)OXY]PHENYL} ACETAMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TF3 doub 361 n y C1 C3 TF3 sing 362 n y C1 O1 TF3 sing 363 n n C2 C4 TF3 sing 364 n y C2 CL1 TF3 sing 365 n n C3 C5 TF3 doub 366 n y C3 H3 TF3 sing 367 n n O1 C6 TF3 sing 368 n n C4 C7 TF3 doub 369 n y C4 H4 TF3 sing 370 n n C5 C7 TF3 sing 371 n y C5 H5 TF3 sing 372 n n C6 C8 TF3 sing 373 n n C6 H6C1 TF3 sing 374 n n C6 H6C2 TF3 sing 375 n n C7 C9 TF3 sing 376 n n C8 C10 TF3 doub 377 n y C8 C11 TF3 sing 378 n y C9 C12 TF3 sing 379 n n C9 H9C1 TF3 sing 380 n n C9 H9C2 TF3 sing 381 n n C10 C13 TF3 sing 382 n y C10 H10 TF3 sing 383 n n C11 C14 TF3 doub 384 n y C11 H11 TF3 sing 385 n n C12 N1 TF3 sing 386 n n C12 O2 TF3 doub 387 n n C13 C15 TF3 doub 388 n y C13 H13 TF3 sing 389 n n C14 C15 TF3 sing 390 n y C14 H14 TF3 sing 391 n n N1 C16 TF3 sing 392 n n N1 H1 TF3 sing 393 n n C15 C17 TF3 sing 394 n n C16 C18 TF3 sing 395 n n C16 H161 TF3 sing 396 n n C16 H162 TF3 sing 397 n n C17 C19 TF3 sing 398 n n C17 C20 TF3 sing 399 n n C17 H17 TF3 sing 400 n n C18 N2 TF3 sing 401 n n C18 H181 TF3 sing 402 n n C18 H182 TF3 sing 403 n n C19 H191 TF3 sing 404 n n C19 H192 TF3 sing 405 n n C19 H193 TF3 sing 406 n n C20 H201 TF3 sing 407 n n C20 H202 TF3 sing 408 n n C20 H203 TF3 sing 409 n n N2 H2N1 TF3 sing 410 n n N2 H2N2 TF3 sing 411 n n # _atom_sites.entry_id 5M4P _atom_sites.fract_transf_matrix[1][1] 0.009137 _atom_sites.fract_transf_matrix[1][2] 0.005275 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011832 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7FE A 1 401 1367 7FE UNL . C 3 TF3 A 1 402 1368 TF3 PFI . D 4 CL A 1 403 1369 CL CL . E 4 CL A 1 404 1370 CL CL . F 5 HOH A 1 501 2076 HOH HOH . F 5 HOH A 2 502 2107 HOH HOH . F 5 HOH A 3 503 2098 HOH HOH . F 5 HOH A 4 504 2011 HOH HOH . F 5 HOH A 5 505 2086 HOH HOH . F 5 HOH A 6 506 2058 HOH HOH . F 5 HOH A 7 507 2027 HOH HOH . F 5 HOH A 8 508 2090 HOH HOH . F 5 HOH A 9 509 2092 HOH HOH . F 5 HOH A 10 510 2037 HOH HOH . F 5 HOH A 11 511 2034 HOH HOH . F 5 HOH A 12 512 2055 HOH HOH . F 5 HOH A 13 513 2111 HOH HOH . F 5 HOH A 14 514 2117 HOH HOH . F 5 HOH A 15 515 2108 HOH HOH . F 5 HOH A 16 516 2075 HOH HOH . F 5 HOH A 17 517 2025 HOH HOH . F 5 HOH A 18 518 2049 HOH HOH . F 5 HOH A 19 519 2100 HOH HOH . F 5 HOH A 20 520 2116 HOH HOH . F 5 HOH A 21 521 2073 HOH HOH . F 5 HOH A 22 522 2033 HOH HOH . F 5 HOH A 23 523 2106 HOH HOH . F 5 HOH A 24 524 2019 HOH HOH . F 5 HOH A 25 525 2083 HOH HOH . F 5 HOH A 26 526 2021 HOH HOH . F 5 HOH A 27 527 2060 HOH HOH . F 5 HOH A 28 528 2101 HOH HOH . F 5 HOH A 29 529 2044 HOH HOH . F 5 HOH A 30 530 2079 HOH HOH . F 5 HOH A 31 531 2084 HOH HOH . F 5 HOH A 32 532 2057 HOH HOH . F 5 HOH A 33 533 2035 HOH HOH . F 5 HOH A 34 534 2018 HOH HOH . F 5 HOH A 35 535 2014 HOH HOH . F 5 HOH A 36 536 2077 HOH HOH . F 5 HOH A 37 537 2065 HOH HOH . F 5 HOH A 38 538 2082 HOH HOH . F 5 HOH A 39 539 2074 HOH HOH . F 5 HOH A 40 540 2026 HOH HOH . F 5 HOH A 41 541 2121 HOH HOH . F 5 HOH A 42 542 2045 HOH HOH . F 5 HOH A 43 543 2023 HOH HOH . F 5 HOH A 44 544 2008 HOH HOH . F 5 HOH A 45 545 2020 HOH HOH . F 5 HOH A 46 546 2028 HOH HOH . F 5 HOH A 47 547 2094 HOH HOH . F 5 HOH A 48 548 2056 HOH HOH . F 5 HOH A 49 549 2063 HOH HOH . F 5 HOH A 50 550 2051 HOH HOH . F 5 HOH A 51 551 2024 HOH HOH . F 5 HOH A 52 552 2062 HOH HOH . F 5 HOH A 53 553 2080 HOH HOH . F 5 HOH A 54 554 2007 HOH HOH . F 5 HOH A 55 555 2110 HOH HOH . F 5 HOH A 56 556 2064 HOH HOH . F 5 HOH A 57 557 2031 HOH HOH . F 5 HOH A 58 558 2013 HOH HOH . F 5 HOH A 59 559 2119 HOH HOH . F 5 HOH A 60 560 2089 HOH HOH . F 5 HOH A 61 561 2029 HOH HOH . F 5 HOH A 62 562 2040 HOH HOH . F 5 HOH A 63 563 2053 HOH HOH . F 5 HOH A 64 564 2032 HOH HOH . F 5 HOH A 65 565 2005 HOH HOH . F 5 HOH A 66 566 2003 HOH HOH . F 5 HOH A 67 567 2078 HOH HOH . F 5 HOH A 68 568 2069 HOH HOH . F 5 HOH A 69 569 2015 HOH HOH . F 5 HOH A 70 570 2093 HOH HOH . F 5 HOH A 71 571 2103 HOH HOH . F 5 HOH A 72 572 2006 HOH HOH . F 5 HOH A 73 573 2022 HOH HOH . F 5 HOH A 74 574 2067 HOH HOH . F 5 HOH A 75 575 2066 HOH HOH . F 5 HOH A 76 576 2041 HOH HOH . F 5 HOH A 77 577 2071 HOH HOH . F 5 HOH A 78 578 2118 HOH HOH . F 5 HOH A 79 579 2002 HOH HOH . F 5 HOH A 80 580 2048 HOH HOH . F 5 HOH A 81 581 2001 HOH HOH . F 5 HOH A 82 582 2047 HOH HOH . F 5 HOH A 83 583 2113 HOH HOH . F 5 HOH A 84 584 2088 HOH HOH . F 5 HOH A 85 585 2050 HOH HOH . F 5 HOH A 86 586 2091 HOH HOH . F 5 HOH A 87 587 2036 HOH HOH . F 5 HOH A 88 588 2099 HOH HOH . F 5 HOH A 89 589 2095 HOH HOH . F 5 HOH A 90 590 2039 HOH HOH . F 5 HOH A 91 591 2052 HOH HOH . F 5 HOH A 92 592 2030 HOH HOH . F 5 HOH A 93 593 2043 HOH HOH . F 5 HOH A 94 594 2012 HOH HOH . F 5 HOH A 95 595 2070 HOH HOH . F 5 HOH A 96 596 2115 HOH HOH . F 5 HOH A 97 597 2085 HOH HOH . F 5 HOH A 98 598 2054 HOH HOH . F 5 HOH A 99 599 2097 HOH HOH . F 5 HOH A 100 600 2120 HOH HOH . F 5 HOH A 101 601 2059 HOH HOH . F 5 HOH A 102 602 2042 HOH HOH . F 5 HOH A 103 603 2010 HOH HOH . F 5 HOH A 104 604 2009 HOH HOH . F 5 HOH A 105 605 2087 HOH HOH . F 5 HOH A 106 606 2038 HOH HOH . F 5 HOH A 107 607 2017 HOH HOH . F 5 HOH A 108 608 2081 HOH HOH . F 5 HOH A 109 609 2016 HOH HOH . F 5 HOH A 110 610 2102 HOH HOH . F 5 HOH A 111 611 2061 HOH HOH . F 5 HOH A 112 612 2004 HOH HOH . F 5 HOH A 113 613 2114 HOH HOH . F 5 HOH A 114 614 2105 HOH HOH . F 5 HOH A 115 615 2112 HOH HOH . F 5 HOH A 116 616 2068 HOH HOH . F 5 HOH A 117 617 2096 HOH HOH . F 5 HOH A 118 618 2046 HOH HOH . F 5 HOH A 119 619 2072 HOH HOH . F 5 HOH A 120 620 2104 HOH HOH . F 5 HOH A 121 621 2109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TF3 . . . C 3 37.689 -35.247 -17.416 1 68.63 ? C1 TF3 402 A 1 HETATM 2 C C2 TF3 . . . C 3 37.396 -36.309 -18.236 1 67.33 ? C2 TF3 402 A 1 HETATM 3 C C3 TF3 . . . C 3 36.801 -34.197 -17.296 1 75.48 ? C3 TF3 402 A 1 HETATM 4 O O1 TF3 . . . C 3 38.864 -35.291 -16.761 1 55.06 ? O1 TF3 402 A 1 HETATM 5 C C4 TF3 . . . C 3 36.217 -36.374 -18.961 1 69.03 ? C4 TF3 402 A 1 HETATM 6 CL CL1 TF3 . . . C 3 38.532 -37.608 -18.364 1 61.29 ? CL1 TF3 402 A 1 HETATM 7 C C5 TF3 . . . C 3 35.624 -34.266 -18.024 1 75.69 ? C5 TF3 402 A 1 HETATM 8 C C6 TF3 . . . C 3 39.031 -34.285 -15.778 1 50.25 ? C6 TF3 402 A 1 HETATM 9 C C7 TF3 . . . C 3 35.317 -35.333 -18.852 1 87.88 ? C7 TF3 402 A 1 HETATM 10 C C8 TF3 . . . C 3 40.222 -34.307 -15.081 1 44.83 ? C8 TF3 402 A 1 HETATM 11 C C9 TF3 . . . C 3 34.001 -35.357 -19.633 1 99.14 ? C9 TF3 402 A 1 HETATM 12 C C10 TF3 . . . C 3 40.72 -33.101 -14.602 1 37.94 ? C10 TF3 402 A 1 HETATM 13 C C11 TF3 . . . C 3 40.914 -35.485 -14.825 1 41.62 ? C11 TF3 402 A 1 HETATM 14 C C12 TF3 . . . C 3 34.263 -34.96 -21.087 1 108.52 ? C12 TF3 402 A 1 HETATM 15 C C13 TF3 . . . C 3 41.908 -33.066 -13.884 1 41.44 ? C13 TF3 402 A 1 HETATM 16 C C14 TF3 . . . C 3 42.105 -35.438 -14.103 1 42.36 ? C14 TF3 402 A 1 HETATM 17 N N1 TF3 . . . C 3 35.044 -35.796 -21.765 1 108.13 ? N1 TF3 402 A 1 HETATM 18 O O2 TF3 . . . C 3 33.773 -33.938 -21.563 1 117.92 ? O2 TF3 402 A 1 HETATM 19 C C15 TF3 . . . C 3 42.596 -34.245 -13.637 1 42.14 ? C15 TF3 402 A 1 HETATM 20 C C16 TF3 . . . C 3 35.396 -35.565 -23.174 1 108.75 ? C16 TF3 402 A 1 HETATM 21 C C17 TF3 . . . C 3 43.907 -34.214 -12.848 1 48.45 ? C17 TF3 402 A 1 HETATM 22 C C18 TF3 . . . C 3 36.868 -35.915 -23.397 1 104.91 ? C18 TF3 402 A 1 HETATM 23 C C19 TF3 . . . C 3 45.088 -34.294 -13.818 1 51.63 ? C19 TF3 402 A 1 HETATM 24 C C20 TF3 . . . C 3 43.934 -35.377 -11.855 1 49.29 ? C20 TF3 402 A 1 HETATM 25 N N2 TF3 . . . C 3 37.459 -34.968 -24.352 1 107.52 ? N2 TF3 402 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #