data_5M5N # _model_server_result.job_id bcIsotIguhUogwZkm_pwNw _model_server_result.datetime_utc '2024-11-23 23:54:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m5n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 5M5N # _exptl.entry_id 5M5N _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 853.906 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TAXOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 501 1_555 E O3G GTP . A GTP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc2 H MG MG . C MG 501 1_555 I O2B ANP . C ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc3 H MG MG . C MG 501 1_555 I O3G ANP . C ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? # _chem_comp.formula 'C47 H51 N O14' _chem_comp.formula_weight 853.906 _chem_comp.id TA1 _chem_comp.mon_nstd_flag . _chem_comp.name TAXOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C01 TA1 sing 433 n n O01 H011 TA1 sing 434 n n C01 C02 TA1 sing 435 n n C01 C43 TA1 sing 436 n n C01 C45 TA1 sing 437 n n C02 O02 TA1 sing 438 n n C02 C10 TA1 sing 439 n n C02 H021 TA1 sing 440 n n O02 C03 TA1 sing 441 n n C03 O03 TA1 doub 442 n n C03 C04 TA1 sing 443 n n C04 C05 TA1 doub 444 n y C04 C09 TA1 sing 445 n y C05 C06 TA1 sing 446 n y C05 H051 TA1 sing 447 n n C06 C07 TA1 doub 448 n y C06 H061 TA1 sing 449 n n C07 C08 TA1 sing 450 n y C07 HC71 TA1 sing 451 n n C08 C09 TA1 doub 452 n y C08 H081 TA1 sing 453 n n C09 H091 TA1 sing 454 n n C10 C11 TA1 sing 455 n n C10 C18 TA1 sing 456 n n C10 H101 TA1 sing 457 n n C11 O04 TA1 sing 458 n n C11 C14 TA1 sing 459 n n C11 C15 TA1 sing 460 n n O04 C12 TA1 sing 461 n n C12 O05 TA1 doub 462 n n C12 C13 TA1 sing 463 n n C13 H131 TA1 sing 464 n n C13 H132 TA1 sing 465 n n C13 H133 TA1 sing 466 n n C14 O06 TA1 sing 467 n n C14 H141 TA1 sing 468 n n C14 H142 TA1 sing 469 n n O06 C15 TA1 sing 470 n n C15 C16 TA1 sing 471 n n C15 H151 TA1 sing 472 n n C16 C17 TA1 sing 473 n n C16 H161 TA1 sing 474 n n C16 H162 TA1 sing 475 n n C17 O07 TA1 sing 476 n n C17 C18 TA1 sing 477 n n C17 H171 TA1 sing 478 n n O07 H071 TA1 sing 479 n n C18 C19 TA1 sing 480 n n C18 C20 TA1 sing 481 n n C19 H191 TA1 sing 482 n n C19 H192 TA1 sing 483 n n C19 H193 TA1 sing 484 n n C20 O08 TA1 doub 485 n n C20 C21 TA1 sing 486 n n C21 O09 TA1 sing 487 n n C21 C24 TA1 sing 488 n n C21 H211 TA1 sing 489 n n O09 C22 TA1 sing 490 n n C22 O10 TA1 doub 491 n n C22 C23 TA1 sing 492 n n C23 H231 TA1 sing 493 n n C23 H232 TA1 sing 494 n n C23 H233 TA1 sing 495 n n C24 C25 TA1 doub 496 n n C24 C45 TA1 sing 497 n n C25 C26 TA1 sing 498 n n C25 C44 TA1 sing 499 n n C26 O11 TA1 sing 500 n n C26 C43 TA1 sing 501 n n C26 H261 TA1 sing 502 n n O11 C27 TA1 sing 503 n n C27 O12 TA1 doub 504 n n C27 C28 TA1 sing 505 n n C28 O13 TA1 sing 506 n n C28 C29 TA1 sing 507 n n C28 H281 TA1 sing 508 n n O13 HO11 TA1 sing 509 n n C29 N01 TA1 sing 510 n n C29 C37 TA1 sing 511 n n C29 H291 TA1 sing 512 n n N01 C30 TA1 sing 513 n n N01 HN01 TA1 sing 514 n n C30 O14 TA1 doub 515 n n C30 C31 TA1 sing 516 n n C31 C32 TA1 doub 517 n y C31 C36 TA1 sing 518 n y C32 C33 TA1 sing 519 n y C32 H321 TA1 sing 520 n n C33 C34 TA1 doub 521 n y C33 H331 TA1 sing 522 n n C34 C35 TA1 sing 523 n y C34 H341 TA1 sing 524 n n C35 C36 TA1 doub 525 n y C35 H351 TA1 sing 526 n n C36 H361 TA1 sing 527 n n C37 C38 TA1 doub 528 n y C37 C42 TA1 sing 529 n y C38 C39 TA1 sing 530 n y C38 H381 TA1 sing 531 n n C39 C40 TA1 doub 532 n y C39 H391 TA1 sing 533 n n C40 C41 TA1 sing 534 n y C40 H401 TA1 sing 535 n n C41 C42 TA1 doub 536 n y C41 H411 TA1 sing 537 n n C42 H421 TA1 sing 538 n n C43 H431 TA1 sing 539 n n C43 H432 TA1 sing 540 n n C44 H441 TA1 sing 541 n n C44 H442 TA1 sing 542 n n C44 H443 TA1 sing 543 n n C45 C46 TA1 sing 544 n n C45 C47 TA1 sing 545 n n C46 H461 TA1 sing 546 n n C46 H462 TA1 sing 547 n n C46 H463 TA1 sing 548 n n C47 H471 TA1 sing 549 n n C47 H472 TA1 sing 550 n n C47 H473 TA1 sing 551 n n # _atom_sites.entry_id 5M5N _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG A 1 501 1208 MG MG . E 5 GTP A 1 502 1209 GTP GTP . F 6 GDP B 1 501 1222 GDP GDP . G 7 TA1 B 1 502 1223 TA1 TA1 . H 4 MG C 1 501 1218 MG MG . I 8 ANP C 1 502 1219 ANP ANP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 TA1 . . . G 7 215.443 254.841 254.913 1 63.75 ? O01 TA1 502 B 1 HETATM 2 C C01 TA1 . . . G 7 215.386 254.526 253.506 1 63.37 ? C01 TA1 502 B 1 HETATM 3 C C02 TA1 . . . G 7 214.842 252.993 253.406 1 64.56 ? C02 TA1 502 B 1 HETATM 4 O O02 TA1 . . . G 7 213.521 253.098 254.065 1 73.61 ? O02 TA1 502 B 1 HETATM 5 C C03 TA1 . . . G 7 213.363 252.522 255.347 1 82.3 ? C03 TA1 502 B 1 HETATM 6 O O03 TA1 . . . G 7 214.235 251.918 255.925 1 81.04 ? O03 TA1 502 B 1 HETATM 7 C C04 TA1 . . . G 7 212.04 252.705 255.879 1 85.16 ? C04 TA1 502 B 1 HETATM 8 C C05 TA1 . . . G 7 212.077 253.165 257.269 1 85.81 ? C05 TA1 502 B 1 HETATM 9 C C06 TA1 . . . G 7 210.737 253.371 257.896 1 88.17 ? C06 TA1 502 B 1 HETATM 10 C C07 TA1 . . . G 7 209.534 253.131 257.175 1 88.93 ? C07 TA1 502 B 1 HETATM 11 C C08 TA1 . . . G 7 209.621 252.741 255.984 1 87.81 ? C08 TA1 502 B 1 HETATM 12 C C09 TA1 . . . G 7 210.808 252.495 255.244 1 86.96 ? C09 TA1 502 B 1 HETATM 13 C C10 TA1 . . . G 7 214.615 252.337 251.94 1 60.76 ? C10 TA1 502 B 1 HETATM 14 C C11 TA1 . . . G 7 213.225 251.533 251.782 1 59.46 ? C11 TA1 502 B 1 HETATM 15 O O04 TA1 . . . G 7 212.039 252.418 251.939 1 58.42 ? O04 TA1 502 B 1 HETATM 16 C C12 TA1 . . . G 7 211.727 253.391 251.019 1 58.87 ? C12 TA1 502 B 1 HETATM 17 O O05 TA1 . . . G 7 212.346 253.634 250.03 1 60.49 ? O05 TA1 502 B 1 HETATM 18 C C13 TA1 . . . G 7 210.464 254.103 251.456 1 55.92 ? C13 TA1 502 B 1 HETATM 19 C C14 TA1 . . . G 7 212.888 250.376 252.759 1 60.18 ? C14 TA1 502 B 1 HETATM 20 O O06 TA1 . . . G 7 212.74 249.416 251.688 1 59.01 ? O06 TA1 502 B 1 HETATM 21 C C15 TA1 . . . G 7 213.04 250.429 250.707 1 59.51 ? C15 TA1 502 B 1 HETATM 22 C C16 TA1 . . . G 7 214.269 250.043 249.817 1 60.03 ? C16 TA1 502 B 1 HETATM 23 C C17 TA1 . . . G 7 215.42 251.04 249.885 1 61.43 ? C17 TA1 502 B 1 HETATM 24 O O07 TA1 . . . G 7 216.516 250.56 249.064 1 62.13 ? O07 TA1 502 B 1 HETATM 25 C C18 TA1 . . . G 7 215.879 251.378 251.383 1 62.13 ? C18 TA1 502 B 1 HETATM 26 C C19 TA1 . . . G 7 216.065 250.05 252.175 1 63.64 ? C19 TA1 502 B 1 HETATM 27 C C20 TA1 . . . G 7 217.375 252.01 251.369 1 65.31 ? C20 TA1 502 B 1 HETATM 28 O O08 TA1 . . . G 7 218.282 251.387 251.894 1 68.11 ? O08 TA1 502 B 1 HETATM 29 C C21 TA1 . . . G 7 217.68 253.373 250.736 1 63.59 ? C21 TA1 502 B 1 HETATM 30 O O09 TA1 . . . G 7 219.134 253.644 250.926 1 58.93 ? O09 TA1 502 B 1 HETATM 31 C C22 TA1 . . . G 7 219.983 253.669 249.838 1 56.05 ? C22 TA1 502 B 1 HETATM 32 O O10 TA1 . . . G 7 219.658 253.492 248.704 1 57.49 ? O10 TA1 502 B 1 HETATM 33 C C23 TA1 . . . G 7 221.393 253.951 250.278 1 54.68 ? C23 TA1 502 B 1 HETATM 34 C C24 TA1 . . . G 7 216.817 254.462 251.367 1 63.31 ? C24 TA1 502 B 1 HETATM 35 C C25 TA1 . . . G 7 215.876 255.135 250.589 1 62.6 ? C25 TA1 502 B 1 HETATM 36 C C26 TA1 . . . G 7 214.926 256.111 251.341 1 60.57 ? C26 TA1 502 B 1 HETATM 37 O O11 TA1 . . . G 7 213.739 256.513 250.572 1 60.54 ? O11 TA1 502 B 1 HETATM 38 C C27 TA1 . . . G 7 213.806 257.636 249.87 1 60.84 ? C27 TA1 502 B 1 HETATM 39 O O12 TA1 . . . G 7 214.734 258.377 249.774 1 60.71 ? O12 TA1 502 B 1 HETATM 40 C C28 TA1 . . . G 7 212.457 257.902 249.156 1 63.49 ? C28 TA1 502 B 1 HETATM 41 O O13 TA1 . . . G 7 212.564 259.128 248.459 1 63.94 ? O13 TA1 502 B 1 HETATM 42 C C29 TA1 . . . G 7 211.334 257.914 250.226 1 64.93 ? C29 TA1 502 B 1 HETATM 43 N N01 TA1 . . . G 7 211.749 258.856 251.264 1 68.46 ? N01 TA1 502 B 1 HETATM 44 C C30 TA1 . . . G 7 211.334 258.764 252.549 1 75.26 ? C30 TA1 502 B 1 HETATM 45 O O14 TA1 . . . G 7 210.568 257.896 252.948 1 72.57 ? O14 TA1 502 B 1 HETATM 46 C C31 TA1 . . . G 7 211.922 259.797 253.448 1 80.56 ? C31 TA1 502 B 1 HETATM 47 C C32 TA1 . . . G 7 211.74 261.17 253.275 1 83.75 ? C32 TA1 502 B 1 HETATM 48 C C33 TA1 . . . G 7 212.337 262.105 254.165 1 86.03 ? C33 TA1 502 B 1 HETATM 49 C C34 TA1 . . . G 7 213.133 261.633 255.244 1 87.21 ? C34 TA1 502 B 1 HETATM 50 C C35 TA1 . . . G 7 213.32 260.275 255.421 1 85.33 ? C35 TA1 502 B 1 HETATM 51 C C36 TA1 . . . G 7 212.738 259.346 254.551 1 84.57 ? C36 TA1 502 B 1 HETATM 52 C C37 TA1 . . . G 7 209.959 258.225 249.599 1 65.34 ? C37 TA1 502 B 1 HETATM 53 C C38 TA1 . . . G 7 209.164 257.146 249.189 1 66.62 ? C38 TA1 502 B 1 HETATM 54 C C39 TA1 . . . G 7 207.891 257.363 248.599 1 67.56 ? C39 TA1 502 B 1 HETATM 55 C C40 TA1 . . . G 7 207.42 258.675 248.423 1 66.79 ? C40 TA1 502 B 1 HETATM 56 C C41 TA1 . . . G 7 208.201 259.746 248.827 1 68.49 ? C41 TA1 502 B 1 HETATM 57 C C42 TA1 . . . G 7 209.478 259.534 249.419 1 66.75 ? C42 TA1 502 B 1 HETATM 58 C C43 TA1 . . . G 7 214.391 255.475 252.683 1 61.38 ? C43 TA1 502 B 1 HETATM 59 C C44 TA1 . . . G 7 215.636 254.933 249.097 1 62.81 ? C44 TA1 502 B 1 HETATM 60 C C45 TA1 . . . G 7 216.93 254.768 252.942 1 63.04 ? C45 TA1 502 B 1 HETATM 61 C C46 TA1 . . . G 7 217.438 256.264 253.142 1 62.66 ? C46 TA1 502 B 1 HETATM 62 C C47 TA1 . . . G 7 217.939 253.952 253.782 1 61.96 ? C47 TA1 502 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 62 #