data_5M6M
#
_model_server_result.job_id            8Aa-gukgnDa528UnwJFmKw 
_model_server_result.datetime_utc      '2024-10-19 13:24:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5m6m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5M6M 
#
_exptl.entry_id    5M6M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5M6M 
_cell.length_a            71.134 
_cell.length_b            71.134 
_cell.length_c            105.614 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5M6M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O PHE 45 A PHE 272 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? 
metalc ? metalc2 A O PHE 45 A PHE 272 1_555 C NA NA . A NA 402 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? 
metalc ? metalc3 A SG CYS 73 A CYS 300 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc4 A SG CYS 76 A CYS 303 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc5 A NE2 HIS 93 A HIS 320 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc6 A SG CYS 100 A CYS 327 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc7 C NA NA . A NA 402 1_555 E O HOH . A HOH 504 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc8 C NA NA . A NA 402 1_555 E O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc9 C NA NA . A NA 402 1_555 E O HOH . A HOH 553 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5M6M 
_atom_sites.fract_transf_matrix[1][1]    0.014058 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014058 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009468 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 401 1 ZN ZN . 
C 3 NA A 1 402 1 NA NA . 
D 4 7H8 A 1 403 1 7H8 L01 . 
E 5 HOH A 1 501 12 HOH HOH . 
E 5 HOH A 2 502 10 HOH HOH . 
E 5 HOH A 3 503 26 HOH HOH . 
E 5 HOH A 4 504 9 HOH HOH . 
E 5 HOH A 5 505 93 HOH HOH . 
E 5 HOH A 6 506 34 HOH HOH . 
E 5 HOH A 7 507 23 HOH HOH . 
E 5 HOH A 8 508 1 HOH HOH . 
E 5 HOH A 9 509 92 HOH HOH . 
E 5 HOH A 10 510 100 HOH HOH . 
E 5 HOH A 11 511 32 HOH HOH . 
E 5 HOH A 12 512 6 HOH HOH . 
E 5 HOH A 13 513 63 HOH HOH . 
E 5 HOH A 14 514 144 HOH HOH . 
E 5 HOH A 15 515 136 HOH HOH . 
E 5 HOH A 16 516 20 HOH HOH . 
E 5 HOH A 17 517 4 HOH HOH . 
E 5 HOH A 18 518 22 HOH HOH . 
E 5 HOH A 19 519 133 HOH HOH . 
E 5 HOH A 20 520 70 HOH HOH . 
E 5 HOH A 21 521 143 HOH HOH . 
E 5 HOH A 22 522 94 HOH HOH . 
E 5 HOH A 23 523 48 HOH HOH . 
E 5 HOH A 24 524 31 HOH HOH . 
E 5 HOH A 25 525 45 HOH HOH . 
E 5 HOH A 26 526 17 HOH HOH . 
E 5 HOH A 27 527 160 HOH HOH . 
E 5 HOH A 28 528 150 HOH HOH . 
E 5 HOH A 29 529 109 HOH HOH . 
E 5 HOH A 30 530 79 HOH HOH . 
E 5 HOH A 31 531 151 HOH HOH . 
E 5 HOH A 32 532 21 HOH HOH . 
E 5 HOH A 33 533 103 HOH HOH . 
E 5 HOH A 34 534 110 HOH HOH . 
E 5 HOH A 35 535 27 HOH HOH . 
E 5 HOH A 36 536 102 HOH HOH . 
E 5 HOH A 37 537 16 HOH HOH . 
E 5 HOH A 38 538 7 HOH HOH . 
E 5 HOH A 39 539 40 HOH HOH . 
E 5 HOH A 40 540 51 HOH HOH . 
E 5 HOH A 41 541 155 HOH HOH . 
E 5 HOH A 42 542 28 HOH HOH . 
E 5 HOH A 43 543 141 HOH HOH . 
E 5 HOH A 44 544 52 HOH HOH . 
E 5 HOH A 45 545 108 HOH HOH . 
E 5 HOH A 46 546 50 HOH HOH . 
E 5 HOH A 47 547 42 HOH HOH . 
E 5 HOH A 48 548 96 HOH HOH . 
E 5 HOH A 49 549 137 HOH HOH . 
E 5 HOH A 50 550 8 HOH HOH . 
E 5 HOH A 51 551 75 HOH HOH . 
E 5 HOH A 52 552 91 HOH HOH . 
E 5 HOH A 53 553 89 HOH HOH . 
E 5 HOH A 54 554 97 HOH HOH . 
E 5 HOH A 55 555 84 HOH HOH . 
E 5 HOH A 56 556 25 HOH HOH . 
E 5 HOH A 57 557 57 HOH HOH . 
E 5 HOH A 58 558 116 HOH HOH . 
E 5 HOH A 59 559 18 HOH HOH . 
E 5 HOH A 60 560 39 HOH HOH . 
E 5 HOH A 61 561 121 HOH HOH . 
E 5 HOH A 62 562 87 HOH HOH . 
E 5 HOH A 63 563 154 HOH HOH . 
E 5 HOH A 64 564 81 HOH HOH . 
E 5 HOH A 65 565 101 HOH HOH . 
E 5 HOH A 66 566 86 HOH HOH . 
E 5 HOH A 67 567 30 HOH HOH . 
E 5 HOH A 68 568 14 HOH HOH . 
E 5 HOH A 69 569 38 HOH HOH . 
E 5 HOH A 70 570 68 HOH HOH . 
E 5 HOH A 71 571 2 HOH HOH . 
E 5 HOH A 72 572 107 HOH HOH . 
E 5 HOH A 73 573 124 HOH HOH . 
E 5 HOH A 74 574 43 HOH HOH . 
E 5 HOH A 75 575 62 HOH HOH . 
E 5 HOH A 76 576 65 HOH HOH . 
E 5 HOH A 77 577 132 HOH HOH . 
E 5 HOH A 78 578 3 HOH HOH . 
E 5 HOH A 79 579 99 HOH HOH . 
E 5 HOH A 80 580 129 HOH HOH . 
E 5 HOH A 81 581 54 HOH HOH . 
E 5 HOH A 82 582 80 HOH HOH . 
E 5 HOH A 83 583 5 HOH HOH . 
E 5 HOH A 84 584 135 HOH HOH . 
E 5 HOH A 85 585 78 HOH HOH . 
E 5 HOH A 86 586 98 HOH HOH . 
E 5 HOH A 87 587 173 HOH HOH . 
E 5 HOH A 88 588 71 HOH HOH . 
E 5 HOH A 89 589 88 HOH HOH . 
E 5 HOH A 90 590 145 HOH HOH . 
E 5 HOH A 91 591 106 HOH HOH . 
E 5 HOH A 92 592 153 HOH HOH . 
E 5 HOH A 93 593 176 HOH HOH . 
E 5 HOH A 94 594 105 HOH HOH . 
E 5 HOH A 95 595 115 HOH HOH . 
E 5 HOH A 96 596 55 HOH HOH . 
E 5 HOH A 97 597 44 HOH HOH . 
E 5 HOH A 98 598 59 HOH HOH . 
E 5 HOH A 99 599 117 HOH HOH . 
E 5 HOH A 100 600 126 HOH HOH . 
E 5 HOH A 101 601 56 HOH HOH . 
E 5 HOH A 102 602 152 HOH HOH . 
E 5 HOH A 103 603 138 HOH HOH . 
E 5 HOH A 104 604 175 HOH HOH . 
E 5 HOH A 105 605 11 HOH HOH . 
E 5 HOH A 106 606 73 HOH HOH . 
E 5 HOH A 107 607 190 HOH HOH . 
E 5 HOH A 108 608 35 HOH HOH . 
E 5 HOH A 109 609 29 HOH HOH . 
E 5 HOH A 110 610 164 HOH HOH . 
E 5 HOH A 111 611 146 HOH HOH . 
E 5 HOH A 112 612 174 HOH HOH . 
E 5 HOH A 113 613 33 HOH HOH . 
E 5 HOH A 114 614 36 HOH HOH . 
E 5 HOH A 115 615 47 HOH HOH . 
E 5 HOH A 116 616 41 HOH HOH . 
E 5 HOH A 117 617 15 HOH HOH . 
E 5 HOH A 118 618 114 HOH HOH . 
E 5 HOH A 119 619 159 HOH HOH . 
E 5 HOH A 120 620 149 HOH HOH . 
E 5 HOH A 121 621 156 HOH HOH . 
E 5 HOH A 122 622 119 HOH HOH . 
E 5 HOH A 123 623 142 HOH HOH . 
E 5 HOH A 124 624 140 HOH HOH . 
E 5 HOH A 125 625 37 HOH HOH . 
E 5 HOH A 126 626 181 HOH HOH . 
E 5 HOH A 127 627 85 HOH HOH . 
E 5 HOH A 128 628 123 HOH HOH . 
E 5 HOH A 129 629 24 HOH HOH . 
E 5 HOH A 130 630 134 HOH HOH . 
E 5 HOH A 131 631 111 HOH HOH . 
E 5 HOH A 132 632 147 HOH HOH . 
E 5 HOH A 133 633 188 HOH HOH . 
E 5 HOH A 134 634 184 HOH HOH . 
E 5 HOH A 135 635 58 HOH HOH . 
E 5 HOH A 136 636 162 HOH HOH . 
E 5 HOH A 137 637 74 HOH HOH . 
E 5 HOH A 138 638 118 HOH HOH . 
E 5 HOH A 139 639 170 HOH HOH . 
E 5 HOH A 140 640 186 HOH HOH . 
E 5 HOH A 141 641 104 HOH HOH . 
E 5 HOH A 142 642 130 HOH HOH . 
E 5 HOH A 143 643 167 HOH HOH . 
E 5 HOH A 144 644 157 HOH HOH . 
E 5 HOH A 145 645 60 HOH HOH . 
E 5 HOH A 146 646 179 HOH HOH . 
E 5 HOH A 147 647 161 HOH HOH . 
E 5 HOH A 148 648 122 HOH HOH . 
E 5 HOH A 149 649 13 HOH HOH . 
E 5 HOH A 150 650 171 HOH HOH . 
E 5 HOH A 151 651 67 HOH HOH . 
E 5 HOH A 152 652 95 HOH HOH . 
E 5 HOH A 153 653 148 HOH HOH . 
E 5 HOH A 154 654 61 HOH HOH . 
E 5 HOH A 155 655 77 HOH HOH . 
E 5 HOH A 156 656 187 HOH HOH . 
E 5 HOH A 157 657 46 HOH HOH . 
E 5 HOH A 158 658 128 HOH HOH . 
E 5 HOH A 159 659 19 HOH HOH . 
E 5 HOH A 160 660 178 HOH HOH . 
E 5 HOH A 161 661 90 HOH HOH . 
E 5 HOH A 162 662 180 HOH HOH . 
E 5 HOH A 163 663 120 HOH HOH . 
E 5 HOH A 164 664 127 HOH HOH . 
E 5 HOH A 165 665 49 HOH HOH . 
E 5 HOH A 166 666 76 HOH HOH . 
E 5 HOH A 167 667 83 HOH HOH . 
E 5 HOH A 168 668 177 HOH HOH . 
E 5 HOH A 169 669 82 HOH HOH . 
E 5 HOH A 170 670 125 HOH HOH . 
E 5 HOH A 171 671 112 HOH HOH . 
E 5 HOH A 172 672 64 HOH HOH . 
E 5 HOH A 173 673 172 HOH HOH . 
E 5 HOH A 174 674 168 HOH HOH . 
E 5 HOH A 175 675 113 HOH HOH . 
E 5 HOH A 176 676 69 HOH HOH . 
E 5 HOH A 177 677 72 HOH HOH . 
E 5 HOH A 178 678 158 HOH HOH . 
E 5 HOH A 179 679 139 HOH HOH . 
E 5 HOH A 180 680 53 HOH HOH . 
E 5 HOH A 181 681 169 HOH HOH . 
E 5 HOH A 182 682 183 HOH HOH . 
E 5 HOH A 183 683 66 HOH HOH . 
E 5 HOH A 184 684 165 HOH HOH . 
E 5 HOH A 185 685 182 HOH HOH . 
E 5 HOH A 186 686 131 HOH HOH . 
E 5 HOH A 187 687 166 HOH HOH . 
E 5 HOH A 188 688 189 HOH HOH . 
E 5 HOH A 189 689 185 HOH HOH . 
E 5 HOH A 190 690 163 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               0.287 
_atom_site.Cartn_y               -29.293 
_atom_site.Cartn_z               1.129 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        57.23 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           1 
#