data_5M7N # _model_server_result.job_id qBvb6U1_S0Umthr6AYU_YQ _model_server_result.datetime_utc '2024-11-05 00:25:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m7n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5M7N # _exptl.entry_id 5M7N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5M7N _cell.length_a 116.867 _cell.length_b 191.611 _cell.length_c 111.702 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M7N _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 10 A ASP 9 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc2 A OD1 ASP 11 A ASP 10 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc3 C MG MG . A MG 501 1_555 G O HOH . A HOH 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc4 B OD1 ASP 10 B ASP 9 1_555 E MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc5 B OD2 ASP 54 B ASP 53 1_555 E MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5M7N _atom_sites.fract_transf_matrix[1][1] 0.008557 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 501 1 MG MG . D 3 ATP A 1 502 1 ATP ATP . E 2 MG B 1 501 2 MG MG . F 3 ATP B 1 502 2 ATP ATP . G 4 HOH A 1 601 101 HOH HOH . G 4 HOH A 2 602 74 HOH HOH . G 4 HOH A 3 603 38 HOH HOH . G 4 HOH A 4 604 15 HOH HOH . G 4 HOH A 5 605 93 HOH HOH . G 4 HOH A 6 606 69 HOH HOH . G 4 HOH A 7 607 24 HOH HOH . G 4 HOH A 8 608 115 HOH HOH . G 4 HOH A 9 609 45 HOH HOH . G 4 HOH A 10 610 9 HOH HOH . G 4 HOH A 11 611 124 HOH HOH . G 4 HOH A 12 612 23 HOH HOH . G 4 HOH A 13 613 50 HOH HOH . G 4 HOH A 14 614 36 HOH HOH . G 4 HOH A 15 615 33 HOH HOH . G 4 HOH A 16 616 106 HOH HOH . G 4 HOH A 17 617 37 HOH HOH . G 4 HOH A 18 618 102 HOH HOH . G 4 HOH A 19 619 88 HOH HOH . G 4 HOH A 20 620 65 HOH HOH . G 4 HOH A 21 621 108 HOH HOH . G 4 HOH A 22 622 46 HOH HOH . G 4 HOH A 23 623 27 HOH HOH . G 4 HOH A 24 624 111 HOH HOH . G 4 HOH A 25 625 67 HOH HOH . G 4 HOH A 26 626 112 HOH HOH . G 4 HOH A 27 627 79 HOH HOH . G 4 HOH A 28 628 118 HOH HOH . G 4 HOH A 29 629 40 HOH HOH . G 4 HOH A 30 630 114 HOH HOH . G 4 HOH A 31 631 5 HOH HOH . G 4 HOH A 32 632 116 HOH HOH . G 4 HOH A 33 633 41 HOH HOH . G 4 HOH A 34 634 44 HOH HOH . G 4 HOH A 35 635 29 HOH HOH . G 4 HOH A 36 636 54 HOH HOH . G 4 HOH A 37 637 91 HOH HOH . G 4 HOH A 38 638 7 HOH HOH . G 4 HOH A 39 639 52 HOH HOH . G 4 HOH A 40 640 21 HOH HOH . G 4 HOH A 41 641 109 HOH HOH . G 4 HOH A 42 642 58 HOH HOH . G 4 HOH A 43 643 71 HOH HOH . G 4 HOH A 44 644 122 HOH HOH . G 4 HOH A 45 645 57 HOH HOH . G 4 HOH A 46 646 85 HOH HOH . G 4 HOH A 47 647 25 HOH HOH . G 4 HOH A 48 648 110 HOH HOH . G 4 HOH A 49 649 75 HOH HOH . G 4 HOH A 50 650 107 HOH HOH . G 4 HOH A 51 651 55 HOH HOH . H 4 HOH B 1 601 105 HOH HOH . H 4 HOH B 2 602 34 HOH HOH . H 4 HOH B 3 603 11 HOH HOH . H 4 HOH B 4 604 89 HOH HOH . H 4 HOH B 5 605 80 HOH HOH . H 4 HOH B 6 606 113 HOH HOH . H 4 HOH B 7 607 28 HOH HOH . H 4 HOH B 8 608 86 HOH HOH . H 4 HOH B 9 609 97 HOH HOH . H 4 HOH B 10 610 51 HOH HOH . H 4 HOH B 11 611 94 HOH HOH . H 4 HOH B 12 612 32 HOH HOH . H 4 HOH B 13 613 20 HOH HOH . H 4 HOH B 14 614 87 HOH HOH . H 4 HOH B 15 615 42 HOH HOH . H 4 HOH B 16 616 62 HOH HOH . H 4 HOH B 17 617 61 HOH HOH . H 4 HOH B 18 618 99 HOH HOH . H 4 HOH B 19 619 19 HOH HOH . H 4 HOH B 20 620 56 HOH HOH . H 4 HOH B 21 621 98 HOH HOH . H 4 HOH B 22 622 18 HOH HOH . H 4 HOH B 23 623 70 HOH HOH . H 4 HOH B 24 624 126 HOH HOH . H 4 HOH B 25 625 13 HOH HOH . H 4 HOH B 26 626 35 HOH HOH . H 4 HOH B 27 627 95 HOH HOH . H 4 HOH B 28 628 30 HOH HOH . H 4 HOH B 29 629 103 HOH HOH . H 4 HOH B 30 630 22 HOH HOH . H 4 HOH B 31 631 123 HOH HOH . H 4 HOH B 32 632 16 HOH HOH . H 4 HOH B 33 633 121 HOH HOH . H 4 HOH B 34 634 119 HOH HOH . H 4 HOH B 35 635 63 HOH HOH . H 4 HOH B 36 636 117 HOH HOH . H 4 HOH B 37 637 31 HOH HOH . H 4 HOH B 38 638 82 HOH HOH . H 4 HOH B 39 639 12 HOH HOH . H 4 HOH B 40 640 100 HOH HOH . H 4 HOH B 41 641 10 HOH HOH . H 4 HOH B 42 642 83 HOH HOH . H 4 HOH B 43 643 77 HOH HOH . H 4 HOH B 44 644 49 HOH HOH . H 4 HOH B 45 645 60 HOH HOH . H 4 HOH B 46 646 53 HOH HOH . H 4 HOH B 47 647 90 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -22.864 _atom_site.Cartn_y 67.468 _atom_site.Cartn_z 3.564 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 63.36 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #