data_5M8R # _model_server_result.job_id DDNSSGQd_r55UusRk6K5dA _model_server_result.datetime_utc '2024-11-15 10:39:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5m8r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":504}' # _entry.id 5M8R # _exptl.entry_id 5M8R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 6 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5M8R _cell.length_a 89.353 _cell.length_b 139.727 _cell.length_c 190.951 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,N,O,P,Q,R,S,T,U,LA 1 1 B,F,G,H,V,W,X,Y,Z,MA 2 1 C,I,J,K,L,AA,BA,CA,DA,NA 3 1 D,M,EA,FA,GA,HA,IA,JA,KA,OA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 N N N ? 6 O N N ? 6 P N N ? 6 Q N N ? 6 V N N ? 6 W N N ? 6 AA N N ? 6 EA N N ? 6 FA N N ? 6 GA N N ? 6 HA N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 1 FUC NAG C1 O1 . O6 HO6 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 5 ? 4 3 2 MAN NAG C1 O1 . O4 HO4 . sing 6 ? 4 4 3 MAN MAN C1 O1 . O3 HO3 . sing 7 ? 5 2 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n E NAG 1 E 1 NAG A 961 NAG 2 n E NAG 2 E 2 NAG A 962 NAG 2 n E FUC 3 E 3 FUC A 965 FUC 2 n F NAG 1 F 1 NAG B 961 NAG 2 n F NAG 2 F 2 NAG B 962 NAG 2 n F FUC 3 F 3 FUC B 965 FUC 3 n G NAG 1 G 1 NAG B 3041 NAG 3 n G NAG 2 G 2 NAG B 3042 NAG 4 n H NAG 1 H 1 NAG B 3501 NAG 4 n H NAG 2 H 2 NAG B 3502 NAG 4 n H MAN 3 H 3 MAN B 3503 MAN 4 n H MAN 4 H 4 MAN B 3504 MAN 2 n I NAG 1 I 1 NAG C 961 NAG 2 n I NAG 2 I 2 NAG C 962 NAG 2 n I FUC 3 I 3 FUC C 965 FUC 2 n J NAG 1 J 1 NAG C 1811 NAG 2 n J NAG 2 J 2 NAG C 1816 NAG 2 n J FUC 3 J 3 FUC C 1812 FUC 3 n K NAG 1 K 1 NAG C 3041 NAG 3 n K NAG 2 K 2 NAG C 3042 NAG 4 n L NAG 1 L 1 NAG C 3501 NAG 4 n L NAG 2 L 2 NAG C 3502 NAG 4 n L MAN 3 L 3 MAN C 3503 MAN 4 n L MAN 4 L 4 MAN C 3504 MAN 5 n M NAG 1 M 1 NAG D 961 NAG 5 n M FUC 2 M 2 FUC D 965 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 30 1_555 A SG CYS 17 A CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf2 A SG CYS 18 A CYS 42 1_555 A SG CYS 41 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 A SG CYS 32 A CYS 56 1_555 A SG CYS 75 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 A SG CYS 77 A CYS 101 1_555 A SG CYS 86 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf5 A SG CYS 89 A CYS 113 1_555 A SG CYS 98 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf6 A SG CYS 234 A CYS 258 1_555 A SG CYS 237 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf7 A SG CYS 266 A CYS 290 1_555 A SG CYS 279 A CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf8 B SG CYS 6 B CYS 30 1_555 B SG CYS 17 B CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf9 B SG CYS 18 B CYS 42 1_555 B SG CYS 41 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf10 B SG CYS 32 B CYS 56 1_555 B SG CYS 75 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf11 B SG CYS 77 B CYS 101 1_555 B SG CYS 86 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf12 B SG CYS 89 B CYS 113 1_555 B SG CYS 98 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf13 B SG CYS 234 B CYS 258 1_555 B SG CYS 237 B CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf14 B SG CYS 266 B CYS 290 1_555 B SG CYS 279 B CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf15 C SG CYS 6 C CYS 30 1_555 C SG CYS 17 C CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf16 C SG CYS 18 C CYS 42 1_555 C SG CYS 41 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf17 C SG CYS 32 C CYS 56 1_555 C SG CYS 75 C CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf18 C SG CYS 77 C CYS 101 1_555 C SG CYS 86 C CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf19 C SG CYS 89 C CYS 113 1_555 C SG CYS 98 C CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf20 C SG CYS 234 C CYS 258 1_555 C SG CYS 237 C CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf21 C SG CYS 266 C CYS 290 1_555 C SG CYS 279 C CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf22 D SG CYS 6 D CYS 30 1_555 D SG CYS 17 D CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf23 D SG CYS 18 D CYS 42 1_555 D SG CYS 41 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf24 D SG CYS 32 D CYS 56 1_555 D SG CYS 75 D CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf25 D SG CYS 77 D CYS 101 1_555 D SG CYS 86 D CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf26 D SG CYS 89 D CYS 113 1_555 D SG CYS 98 D CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf27 D SG CYS 234 D CYS 258 1_555 D SG CYS 237 D CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf28 D SG CYS 266 D CYS 290 1_555 D SG CYS 279 D CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? covale ? covale1 A ND2 ASN 72 A ASN 96 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 A ND2 ASN 157 A ASN 181 1_555 N C1 NAG . A NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.486 ? covale ? covale3 A ND2 ASN 280 A ASN 304 1_555 O C1 NAG . A NAG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale4 A ND2 ASN 326 A ASN 350 1_555 P C1 NAG . A NAG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale5 A ND2 ASN 361 A ASN 385 1_555 Q C1 NAG . A NAG 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale6 B ND2 ASN 72 B ASN 96 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale7 B ND2 ASN 157 B ASN 181 1_555 V C1 NAG . B NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 ? covale ? covale8 B ND2 ASN 280 B ASN 304 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale9 B ND2 ASN 326 B ASN 350 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale10 B ND2 ASN 361 B ASN 385 1_555 W C1 NAG . B NAG 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale11 C ND2 ASN 72 C ASN 96 1_555 I C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale12 C ND2 ASN 157 C ASN 181 1_555 J C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale13 C ND2 ASN 280 C ASN 304 1_555 K C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale14 C ND2 ASN 326 C ASN 350 1_555 L C1 NAG . L NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale15 C ND2 ASN 361 C ASN 385 1_555 AA C1 NAG . C NAG 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? covale ? covale16 D ND2 ASN 72 D ASN 96 1_555 M C1 NAG . M NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? covale ? covale17 D ND2 ASN 157 D ASN 181 1_555 EA C1 NAG . D NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale18 D ND2 ASN 280 D ASN 304 1_555 FA C1 NAG . D NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale19 D ND2 ASN 326 D ASN 350 1_555 GA C1 NAG . D NAG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale20 D ND2 ASN 361 D ASN 385 1_555 HA C1 NAG . D NAG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale21 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale22 E O6 NAG . E NAG 1 1_555 E C1 FUC . E FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale23 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? covale ? covale24 F O6 NAG . F NAG 1 1_555 F C1 FUC . F FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale25 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale26 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale27 H O4 NAG . H NAG 2 1_555 H C1 MAN . H MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale28 H O3 MAN . H MAN 3 1_555 H C1 MAN . H MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale29 I O4 NAG . I NAG 1 1_555 I C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale30 I O6 NAG . I NAG 1 1_555 I C1 FUC . I FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale31 J O4 NAG . J NAG 1 1_555 J C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale32 J O6 NAG . J NAG 1 1_555 J C1 FUC . J FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? covale ? covale33 K O4 NAG . K NAG 1 1_555 K C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale34 L O4 NAG . L NAG 1 1_555 L C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale35 L O4 NAG . L NAG 2 1_555 L C1 MAN . L MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale36 L O3 MAN . L MAN 3 1_555 L C1 MAN . L MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale37 M O6 NAG . M NAG 1 1_555 M C1 FUC . M FUC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? metalc ? metalc1 A OE2 GLU 42 A GLU 66 1_555 T ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc2 A ND1 HIS 76 A HIS 100 1_555 T ZN ZN . A ZN 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc3 A NE2 HIS 168 A HIS 192 1_555 S ZN ZN . A ZN 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc4 A NE2 HIS 191 A HIS 215 1_555 S ZN ZN . A ZN 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc5 A NE2 HIS 200 A HIS 224 1_555 S ZN ZN . A ZN 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc6 A NE2 HIS 353 A HIS 377 1_555 R ZN ZN . A ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc7 A NE2 HIS 357 A HIS 381 1_555 R ZN ZN . A ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc8 A NE2 HIS 380 A HIS 404 1_555 R ZN ZN . A ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc9 R ZN ZN . A ZN 508 1_555 LA O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc10 S ZN ZN . A ZN 509 1_555 LA O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc11 T ZN ZN . A ZN 510 1_555 B OE2 GLU 42 B GLU 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? metalc ? metalc12 T ZN ZN . A ZN 510 1_555 B ND1 HIS 76 B HIS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc13 B NE2 HIS 168 B HIS 192 1_555 X ZN ZN . B ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc14 B NE2 HIS 191 B HIS 215 1_555 X ZN ZN . B ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc15 B NE2 HIS 200 B HIS 224 1_555 X ZN ZN . B ZN 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc16 B NE2 HIS 353 B HIS 377 1_555 Y ZN ZN . B ZN 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc17 B NE2 HIS 357 B HIS 381 1_555 Y ZN ZN . B ZN 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc18 B NE2 HIS 380 B HIS 404 1_555 Y ZN ZN . B ZN 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc19 X ZN ZN . B ZN 512 1_555 MA O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc20 Y ZN ZN . B ZN 513 1_555 MA O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc21 C NE2 HIS 168 C HIS 192 1_555 CA ZN ZN . C ZN 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc22 C NE2 HIS 191 C HIS 215 1_555 CA ZN ZN . C ZN 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc23 C NE2 HIS 200 C HIS 224 1_555 CA ZN ZN . C ZN 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc24 C NE2 HIS 353 C HIS 377 1_555 BA ZN ZN . C ZN 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc25 C NE2 HIS 357 C HIS 381 1_555 BA ZN ZN . C ZN 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc26 C NE2 HIS 380 C HIS 404 1_555 BA ZN ZN . C ZN 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc27 BA ZN ZN . C ZN 514 1_555 NA O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc28 CA ZN ZN . C ZN 515 1_555 NA O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc29 D NE2 HIS 168 D HIS 192 1_555 IA ZN ZN . D ZN 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc30 D NE2 HIS 191 D HIS 215 1_555 IA ZN ZN . D ZN 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc31 D NE2 HIS 200 D HIS 224 1_555 IA ZN ZN . D ZN 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc32 D NE2 HIS 353 D HIS 377 1_555 JA ZN ZN . D ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc33 D NE2 HIS 357 D HIS 381 1_555 JA ZN ZN . D ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc34 D NE2 HIS 380 D HIS 404 1_555 JA ZN ZN . D ZN 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc35 IA ZN ZN . D ZN 507 1_555 OA O HOH . D HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc36 JA ZN ZN . D ZN 508 1_555 OA O HOH . D HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms ? # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 5M8R _atom_sites.fract_transf_matrix[1][1] 0.011192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code N 6 NAG A 1 504 1811 NAG NAG . O 6 NAG A 1 505 3041 NAG NAG . P 6 NAG A 1 506 3501 NAG NAG . Q 6 NAG A 1 507 3851 NAG NAG . R 7 ZN A 1 508 3 ZN ZN . S 7 ZN A 1 509 4 ZN ZN . T 7 ZN A 1 510 9 ZN ZN . U 8 MMS A 1 511 1 MMS DRG . V 6 NAG B 1 504 1811 NAG NAG . W 6 NAG B 1 511 3851 NAG NAG . X 7 ZN B 1 512 7 ZN ZN . Y 7 ZN B 1 513 8 ZN ZN . Z 8 MMS B 1 514 2 MMS DRG . AA 6 NAG C 1 513 3851 NAG NAG . BA 7 ZN C 1 514 5 ZN ZN . CA 7 ZN C 1 515 6 ZN ZN . DA 8 MMS C 1 516 3 MMS DRG . EA 6 NAG D 1 503 1811 NAG NAG . FA 6 NAG D 1 504 3041 NAG NAG . GA 6 NAG D 1 505 3501 NAG NAG . HA 6 NAG D 1 506 3851 NAG NAG . IA 7 ZN D 1 507 1 ZN ZN . JA 7 ZN D 1 508 2 ZN ZN . KA 8 MMS D 1 509 4 MMS DRG . LA 9 HOH A 1 601 15 HOH HOH . LA 9 HOH A 2 602 30 HOH HOH . LA 9 HOH A 3 603 35 HOH HOH . LA 9 HOH A 4 604 16 HOH HOH . LA 9 HOH A 5 605 13 HOH HOH . LA 9 HOH A 6 606 29 HOH HOH . MA 9 HOH B 1 601 14 HOH HOH . MA 9 HOH B 2 602 34 HOH HOH . MA 9 HOH B 3 603 37 HOH HOH . MA 9 HOH B 4 604 28 HOH HOH . MA 9 HOH B 5 605 36 HOH HOH . MA 9 HOH B 6 606 18 HOH HOH . MA 9 HOH B 7 607 10 HOH HOH . MA 9 HOH B 8 608 26 HOH HOH . MA 9 HOH B 9 609 21 HOH HOH . MA 9 HOH B 10 610 9 HOH HOH . MA 9 HOH B 11 611 17 HOH HOH . NA 9 HOH C 1 601 1 HOH HOH . NA 9 HOH C 2 602 39 HOH HOH . NA 9 HOH C 3 603 33 HOH HOH . NA 9 HOH C 4 604 23 HOH HOH . NA 9 HOH C 5 605 19 HOH HOH . NA 9 HOH C 6 606 11 HOH HOH . NA 9 HOH C 7 607 6 HOH HOH . NA 9 HOH C 8 608 27 HOH HOH . NA 9 HOH C 9 609 38 HOH HOH . OA 9 HOH D 1 601 12 HOH HOH . OA 9 HOH D 2 602 25 HOH HOH . OA 9 HOH D 3 603 5 HOH HOH . OA 9 HOH D 4 604 40 HOH HOH . OA 9 HOH D 5 605 20 HOH HOH . OA 9 HOH D 6 606 31 HOH HOH . OA 9 HOH D 7 607 22 HOH HOH . OA 9 HOH D 8 608 7 HOH HOH . OA 9 HOH D 9 609 3 HOH HOH . OA 9 HOH D 10 610 24 HOH HOH . OA 9 HOH D 11 611 8 HOH HOH . OA 9 HOH D 12 612 4 HOH HOH . OA 9 HOH D 13 613 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . V 6 -36.94 11.272 30.048 1 57.44 ? C1 NAG 504 B 1 HETATM 2 C C2 NAG . . . V 6 -35.978 10.038 30.07 1 66.4 ? C2 NAG 504 B 1 HETATM 3 C C3 NAG . . . V 6 -36.667 8.685 30.467 1 67.97 ? C3 NAG 504 B 1 HETATM 4 C C4 NAG . . . V 6 -38.2 8.653 30.446 1 64.54 ? C4 NAG 504 B 1 HETATM 5 C C5 NAG . . . V 6 -38.79 9.945 29.937 1 62.6 ? C5 NAG 504 B 1 HETATM 6 C C6 NAG . . . V 6 -40.268 10.096 30.224 1 58.08 ? C6 NAG 504 B 1 HETATM 7 C C7 NAG . . . V 6 -34.018 10.376 28.574 1 61.36 ? C7 NAG 504 B 1 HETATM 8 C C8 NAG . . . V 6 -33.476 10.164 27.191 1 51.01 ? C8 NAG 504 B 1 HETATM 9 N N2 NAG . . . V 6 -35.264 9.914 28.799 1 67.65 ? N2 NAG 504 B 1 HETATM 10 O O3 NAG . . . V 6 -36.221 8.336 31.773 1 70.97 ? O3 NAG 504 B 1 HETATM 11 O O4 NAG . . . V 6 -38.699 7.558 29.684 1 66.07 ? O4 NAG 504 B 1 HETATM 12 O O5 NAG . . . V 6 -38.115 10.968 30.654 1 59.69 ? O5 NAG 504 B 1 HETATM 13 O O6 NAG . . . V 6 -40.86 11.13 29.446 1 51.83 ? O6 NAG 504 B 1 HETATM 14 O O7 NAG . . . V 6 -33.351 10.924 29.451 1 61.55 ? O7 NAG 504 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 424 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 14 #