data_5M9C
#
_model_server_result.job_id            qQYjxqxKBAXDCOwMYapAsQ 
_model_server_result.datetime_utc      '2024-10-19 11:47:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5m9c 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
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_entry.id    5M9C 
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_exptl.entry_id    5M9C 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              150.087 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'D(-)-TARTARIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5M9C 
_cell.length_a            82.837 
_cell.length_b            116.074 
_cell.length_c            37.355 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5M9C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 27 A CYS 26 1_555 A SG CYS 82 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf2 A SG CYS 40 A CYS 39 1_555 A SG CYS 93 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? 
disulf ? disulf3 A SG CYS 58 A CYS 57 1_555 A SG CYS 108 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
#
_chem_comp.formula           'C4 H6 O6' 
_chem_comp.formula_weight    150.087 
_chem_comp.id                TAR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'D(-)-TARTARIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 TAR doub 306 n n 
O11 C1 TAR sing 307 n n 
O11 HO1 TAR sing 308 n n 
C1 C2 TAR sing 309 n n 
C2 O2 TAR sing 310 n n 
C2 C3 TAR sing 311 n n 
C2 H2 TAR sing 312 n n 
O2 HO2 TAR sing 313 n n 
C3 O3 TAR sing 314 n n 
C3 C4 TAR sing 315 n n 
C3 H3 TAR sing 316 n n 
O3 HO3 TAR sing 317 n n 
C4 O4 TAR doub 318 n n 
C4 O41 TAR sing 319 n n 
O41 HO4 TAR sing 320 n n 
#
_atom_sites.entry_id                     5M9C 
_atom_sites.fract_transf_matrix[1][1]    0.012072 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008615 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02677 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TAR A 1 201 1 TAR TAR . 
C 3 PEG A 1 202 1 PEG PEG . 
D 4 HOH A 1 301 67 HOH HOH . 
D 4 HOH A 2 302 16 HOH HOH . 
D 4 HOH A 3 303 62 HOH HOH . 
D 4 HOH A 4 304 54 HOH HOH . 
D 4 HOH A 5 305 1 HOH HOH . 
D 4 HOH A 6 306 19 HOH HOH . 
D 4 HOH A 7 307 47 HOH HOH . 
D 4 HOH A 8 308 17 HOH HOH . 
D 4 HOH A 9 309 31 HOH HOH . 
D 4 HOH A 10 310 68 HOH HOH . 
D 4 HOH A 11 311 37 HOH HOH . 
D 4 HOH A 12 312 24 HOH HOH . 
D 4 HOH A 13 313 63 HOH HOH . 
D 4 HOH A 14 314 36 HOH HOH . 
D 4 HOH A 15 315 8 HOH HOH . 
D 4 HOH A 16 316 18 HOH HOH . 
D 4 HOH A 17 317 53 HOH HOH . 
D 4 HOH A 18 318 4 HOH HOH . 
D 4 HOH A 19 319 26 HOH HOH . 
D 4 HOH A 20 320 29 HOH HOH . 
D 4 HOH A 21 321 32 HOH HOH . 
D 4 HOH A 22 322 41 HOH HOH . 
D 4 HOH A 23 323 56 HOH HOH . 
D 4 HOH A 24 324 5 HOH HOH . 
D 4 HOH A 25 325 27 HOH HOH . 
D 4 HOH A 26 326 49 HOH HOH . 
D 4 HOH A 27 327 2 HOH HOH . 
D 4 HOH A 28 328 50 HOH HOH . 
D 4 HOH A 29 329 7 HOH HOH . 
D 4 HOH A 30 330 20 HOH HOH . 
D 4 HOH A 31 331 52 HOH HOH . 
D 4 HOH A 32 332 25 HOH HOH . 
D 4 HOH A 33 333 46 HOH HOH . 
D 4 HOH A 34 334 13 HOH HOH . 
D 4 HOH A 35 335 48 HOH HOH . 
D 4 HOH A 36 336 51 HOH HOH . 
D 4 HOH A 37 337 44 HOH HOH . 
D 4 HOH A 38 338 3 HOH HOH . 
D 4 HOH A 39 339 12 HOH HOH . 
D 4 HOH A 40 340 21 HOH HOH . 
D 4 HOH A 41 341 14 HOH HOH . 
D 4 HOH A 42 342 22 HOH HOH . 
D 4 HOH A 43 343 9 HOH HOH . 
D 4 HOH A 44 344 66 HOH HOH . 
D 4 HOH A 45 345 6 HOH HOH . 
D 4 HOH A 46 346 30 HOH HOH . 
D 4 HOH A 47 347 28 HOH HOH . 
D 4 HOH A 48 348 11 HOH HOH . 
D 4 HOH A 49 349 23 HOH HOH . 
D 4 HOH A 50 350 33 HOH HOH . 
D 4 HOH A 51 351 38 HOH HOH . 
D 4 HOH A 52 352 10 HOH HOH . 
D 4 HOH A 53 353 71 HOH HOH . 
D 4 HOH A 54 354 42 HOH HOH . 
D 4 HOH A 55 355 15 HOH HOH . 
D 4 HOH A 56 356 60 HOH HOH . 
D 4 HOH A 57 357 34 HOH HOH . 
D 4 HOH A 58 358 57 HOH HOH . 
D 4 HOH A 59 359 55 HOH HOH . 
D 4 HOH A 60 360 43 HOH HOH . 
D 4 HOH A 61 361 59 HOH HOH . 
D 4 HOH A 62 362 73 HOH HOH . 
D 4 HOH A 63 363 58 HOH HOH . 
D 4 HOH A 64 364 40 HOH HOH . 
D 4 HOH A 65 365 61 HOH HOH . 
D 4 HOH A 66 366 72 HOH HOH . 
D 4 HOH A 67 367 65 HOH HOH . 
D 4 HOH A 68 368 35 HOH HOH . 
D 4 HOH A 69 369 64 HOH HOH . 
D 4 HOH A 70 370 69 HOH HOH . 
D 4 HOH A 71 371 39 HOH HOH . 
D 4 HOH A 72 372 45 HOH HOH . 
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loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 TAR . . . B 2 -44.526 -19.149 2.352 1 51.56 ? O1 TAR 201 A 1 
HETATM 2 O O11 TAR . . . B 2 -45.446 -21.088 2.536 1 40.91 ? O11 TAR 201 A 1 
HETATM 3 C C1 TAR . . . B 2 -44.58 -20.27 2.872 1 47.09 ? C1 TAR 201 A 1 
HETATM 4 C C2 TAR . . . B 2 -43.547 -20.576 3.915 1 51.29 ? C2 TAR 201 A 1 
HETATM 5 O O2 TAR . . . B 2 -43.891 -19.739 5.014 1 47.17 ? O2 TAR 201 A 1 
HETATM 6 C C3 TAR . . . B 2 -43.54 -22.035 4.344 1 56.22 ? C3 TAR 201 A 1 
HETATM 7 O O3 TAR . . . B 2 -44.837 -22.303 4.898 1 66.03 ? O3 TAR 201 A 1 
HETATM 8 C C4 TAR . . . B 2 -42.485 -22.306 5.384 1 56.23 ? C4 TAR 201 A 1 
HETATM 9 O O4 TAR . . . B 2 -41.259 -22.242 5.069 1 56.68 ? O4 TAR 201 A 1 
HETATM 10 O O41 TAR . . . B 2 -42.901 -22.592 6.534 1 49.99 ? O41 TAR 201 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
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