data_5MAG
#
_model_server_result.job_id            3QirBs4unKw16dGfGuHYLA 
_model_server_result.datetime_utc      '2024-11-21 17:23:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mag 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    5MAG 
#
_exptl.entry_id    5MAG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MAG 
_cell.length_a            61.18 
_cell.length_b            62.81 
_cell.length_c            94.11 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MAG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 207 n n 
C1 C2 GOL sing 208 n n 
C1 H11 GOL sing 209 n n 
C1 H12 GOL sing 210 n n 
O1 HO1 GOL sing 211 n n 
C2 O2 GOL sing 212 n n 
C2 C3 GOL sing 213 n n 
C2 H2 GOL sing 214 n n 
O2 HO2 GOL sing 215 n n 
C3 O3 GOL sing 216 n n 
C3 H31 GOL sing 217 n n 
C3 H32 GOL sing 218 n n 
O3 HO3 GOL sing 219 n n 
#
_atom_sites.entry_id                     5MAG 
_atom_sites.fract_transf_matrix[1][1]    0.016345 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015921 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010626 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 7KC A 1 401 1 7KC INH . 
C 3 DMS A 1 402 1 DMS DMS . 
D 4 GOL A 1 403 1 GOL GOL . 
E 5 HOH A 1 501 27 HOH HOH . 
E 5 HOH A 2 502 26 HOH HOH . 
E 5 HOH A 3 503 9 HOH HOH . 
E 5 HOH A 4 504 87 HOH HOH . 
E 5 HOH A 5 505 36 HOH HOH . 
E 5 HOH A 6 506 11 HOH HOH . 
E 5 HOH A 7 507 35 HOH HOH . 
E 5 HOH A 8 508 106 HOH HOH . 
E 5 HOH A 9 509 34 HOH HOH . 
E 5 HOH A 10 510 65 HOH HOH . 
E 5 HOH A 11 511 114 HOH HOH . 
E 5 HOH A 12 512 52 HOH HOH . 
E 5 HOH A 13 513 24 HOH HOH . 
E 5 HOH A 14 514 20 HOH HOH . 
E 5 HOH A 15 515 4 HOH HOH . 
E 5 HOH A 16 516 30 HOH HOH . 
E 5 HOH A 17 517 64 HOH HOH . 
E 5 HOH A 18 518 112 HOH HOH . 
E 5 HOH A 19 519 95 HOH HOH . 
E 5 HOH A 20 520 89 HOH HOH . 
E 5 HOH A 21 521 6 HOH HOH . 
E 5 HOH A 22 522 44 HOH HOH . 
E 5 HOH A 23 523 31 HOH HOH . 
E 5 HOH A 24 524 117 HOH HOH . 
E 5 HOH A 25 525 72 HOH HOH . 
E 5 HOH A 26 526 70 HOH HOH . 
E 5 HOH A 27 527 8 HOH HOH . 
E 5 HOH A 28 528 3 HOH HOH . 
E 5 HOH A 29 529 113 HOH HOH . 
E 5 HOH A 30 530 41 HOH HOH . 
E 5 HOH A 31 531 7 HOH HOH . 
E 5 HOH A 32 532 84 HOH HOH . 
E 5 HOH A 33 533 66 HOH HOH . 
E 5 HOH A 34 534 85 HOH HOH . 
E 5 HOH A 35 535 19 HOH HOH . 
E 5 HOH A 36 536 54 HOH HOH . 
E 5 HOH A 37 537 103 HOH HOH . 
E 5 HOH A 38 538 60 HOH HOH . 
E 5 HOH A 39 539 45 HOH HOH . 
E 5 HOH A 40 540 115 HOH HOH . 
E 5 HOH A 41 541 43 HOH HOH . 
E 5 HOH A 42 542 32 HOH HOH . 
E 5 HOH A 43 543 39 HOH HOH . 
E 5 HOH A 44 544 75 HOH HOH . 
E 5 HOH A 45 545 46 HOH HOH . 
E 5 HOH A 46 546 40 HOH HOH . 
E 5 HOH A 47 547 14 HOH HOH . 
E 5 HOH A 48 548 55 HOH HOH . 
E 5 HOH A 49 549 5 HOH HOH . 
E 5 HOH A 50 550 82 HOH HOH . 
E 5 HOH A 51 551 97 HOH HOH . 
E 5 HOH A 52 552 51 HOH HOH . 
E 5 HOH A 53 553 28 HOH HOH . 
E 5 HOH A 54 554 59 HOH HOH . 
E 5 HOH A 55 555 111 HOH HOH . 
E 5 HOH A 56 556 12 HOH HOH . 
E 5 HOH A 57 557 74 HOH HOH . 
E 5 HOH A 58 558 25 HOH HOH . 
E 5 HOH A 59 559 47 HOH HOH . 
E 5 HOH A 60 560 2 HOH HOH . 
E 5 HOH A 61 561 29 HOH HOH . 
E 5 HOH A 62 562 57 HOH HOH . 
E 5 HOH A 63 563 21 HOH HOH . 
E 5 HOH A 64 564 69 HOH HOH . 
E 5 HOH A 65 565 33 HOH HOH . 
E 5 HOH A 66 566 79 HOH HOH . 
E 5 HOH A 67 567 13 HOH HOH . 
E 5 HOH A 68 568 88 HOH HOH . 
E 5 HOH A 69 569 18 HOH HOH . 
E 5 HOH A 70 570 53 HOH HOH . 
E 5 HOH A 71 571 99 HOH HOH . 
E 5 HOH A 72 572 50 HOH HOH . 
E 5 HOH A 73 573 56 HOH HOH . 
E 5 HOH A 74 574 10 HOH HOH . 
E 5 HOH A 75 575 62 HOH HOH . 
E 5 HOH A 76 576 48 HOH HOH . 
E 5 HOH A 77 577 105 HOH HOH . 
E 5 HOH A 78 578 93 HOH HOH . 
E 5 HOH A 79 579 38 HOH HOH . 
E 5 HOH A 80 580 109 HOH HOH . 
E 5 HOH A 81 581 116 HOH HOH . 
E 5 HOH A 82 582 107 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -37.433 -2.805 -7.109 1 50.2 ? C1 GOL 403 A 1 
HETATM 2 O O1 GOL . . . D 4 -37.171 -4.158 -6.702 1 47.69 ? O1 GOL 403 A 1 
HETATM 3 C C2 GOL . . . D 4 -37.863 -2.841 -8.569 1 51.3 ? C2 GOL 403 A 1 
HETATM 4 O O2 GOL . . . D 4 -36.793 -3.472 -9.273 1 52.53 ? O2 GOL 403 A 1 
HETATM 5 C C3 GOL . . . D 4 -38.158 -1.496 -9.232 1 51.86 ? C3 GOL 403 A 1 
HETATM 6 O O3 GOL . . . D 4 -38.751 -0.544 -8.332 1 52.17 ? O3 GOL 403 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           577 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#