data_5MEQ
#
_model_server_result.job_id            r-kjlONH_FF0xj3w8fyGXA 
_model_server_result.datetime_utc      '2024-12-26 11:20:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5meq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    5MEQ 
#
_exptl.entry_id    5MEQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.53 
_cell.angle_gamma         90 
_cell.entry_id            5MEQ 
_cell.length_a            53.34 
_cell.length_b            81.44 
_cell.length_c            56.77 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MEQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5MEQ 
_atom_sites.fract_transf_matrix[1][1]    0.018748 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008163 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012279 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019212 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 SO4 B 1 101 311 SO4 SO4 . 
E 5 EDO C 1 301 301 EDO EDO . 
F 6 HOH A 1 301 473 HOH HOH . 
F 6 HOH A 2 302 509 HOH HOH . 
F 6 HOH A 3 303 472 HOH HOH . 
F 6 HOH A 4 304 408 HOH HOH . 
F 6 HOH A 5 305 431 HOH HOH . 
F 6 HOH A 6 306 429 HOH HOH . 
F 6 HOH A 7 307 491 HOH HOH . 
F 6 HOH A 8 308 457 HOH HOH . 
F 6 HOH A 9 309 436 HOH HOH . 
F 6 HOH A 10 310 486 HOH HOH . 
F 6 HOH A 11 311 435 HOH HOH . 
F 6 HOH A 12 312 438 HOH HOH . 
F 6 HOH A 13 313 455 HOH HOH . 
F 6 HOH A 14 314 463 HOH HOH . 
F 6 HOH A 15 315 488 HOH HOH . 
F 6 HOH A 16 316 452 HOH HOH . 
F 6 HOH A 17 317 483 HOH HOH . 
F 6 HOH A 18 318 459 HOH HOH . 
F 6 HOH A 19 319 445 HOH HOH . 
F 6 HOH A 20 320 448 HOH HOH . 
F 6 HOH A 21 321 497 HOH HOH . 
F 6 HOH A 22 322 411 HOH HOH . 
F 6 HOH A 23 323 467 HOH HOH . 
F 6 HOH A 24 324 422 HOH HOH . 
F 6 HOH A 25 325 424 HOH HOH . 
F 6 HOH A 26 326 481 HOH HOH . 
F 6 HOH A 27 327 464 HOH HOH . 
F 6 HOH A 28 328 478 HOH HOH . 
F 6 HOH A 29 329 418 HOH HOH . 
F 6 HOH A 30 330 458 HOH HOH . 
F 6 HOH A 31 331 500 HOH HOH . 
F 6 HOH A 32 332 405 HOH HOH . 
F 6 HOH A 33 333 433 HOH HOH . 
F 6 HOH A 34 334 460 HOH HOH . 
F 6 HOH A 35 335 409 HOH HOH . 
F 6 HOH A 36 336 442 HOH HOH . 
F 6 HOH A 37 337 420 HOH HOH . 
F 6 HOH A 38 338 428 HOH HOH . 
F 6 HOH A 39 339 443 HOH HOH . 
F 6 HOH A 40 340 446 HOH HOH . 
F 6 HOH A 41 341 425 HOH HOH . 
F 6 HOH A 42 342 453 HOH HOH . 
F 6 HOH A 43 343 450 HOH HOH . 
F 6 HOH A 44 344 485 HOH HOH . 
F 6 HOH A 45 345 482 HOH HOH . 
F 6 HOH A 46 346 407 HOH HOH . 
F 6 HOH A 47 347 477 HOH HOH . 
F 6 HOH A 48 348 434 HOH HOH . 
F 6 HOH A 49 349 476 HOH HOH . 
F 6 HOH A 50 350 439 HOH HOH . 
F 6 HOH A 51 351 489 HOH HOH . 
F 6 HOH A 52 352 495 HOH HOH . 
F 6 HOH A 53 353 406 HOH HOH . 
F 6 HOH A 54 354 494 HOH HOH . 
F 6 HOH A 55 355 403 HOH HOH . 
F 6 HOH A 56 356 493 HOH HOH . 
F 6 HOH A 57 357 462 HOH HOH . 
F 6 HOH A 58 358 416 HOH HOH . 
F 6 HOH A 59 359 430 HOH HOH . 
F 6 HOH A 60 360 465 HOH HOH . 
F 6 HOH A 61 361 421 HOH HOH . 
F 6 HOH A 62 362 444 HOH HOH . 
F 6 HOH A 63 363 496 HOH HOH . 
F 6 HOH A 64 364 441 HOH HOH . 
F 6 HOH A 65 365 471 HOH HOH . 
F 6 HOH A 66 366 427 HOH HOH . 
F 6 HOH A 67 367 498 HOH HOH . 
F 6 HOH A 68 368 423 HOH HOH . 
F 6 HOH A 69 369 508 HOH HOH . 
F 6 HOH A 70 370 456 HOH HOH . 
F 6 HOH A 71 371 499 HOH HOH . 
F 6 HOH A 72 372 410 HOH HOH . 
F 6 HOH A 73 373 469 HOH HOH . 
F 6 HOH A 74 374 505 HOH HOH . 
F 6 HOH A 75 375 415 HOH HOH . 
F 6 HOH A 76 376 501 HOH HOH . 
F 6 HOH A 77 377 506 HOH HOH . 
F 6 HOH A 78 378 502 HOH HOH . 
F 6 HOH A 79 379 504 HOH HOH . 
G 6 HOH B 1 201 454 HOH HOH . 
G 6 HOH B 2 202 507 HOH HOH . 
G 6 HOH B 3 203 426 HOH HOH . 
G 6 HOH B 4 204 474 HOH HOH . 
G 6 HOH B 5 205 461 HOH HOH . 
G 6 HOH B 6 206 470 HOH HOH . 
G 6 HOH B 7 207 466 HOH HOH . 
G 6 HOH B 8 208 475 HOH HOH . 
G 6 HOH B 9 209 437 HOH HOH . 
G 6 HOH B 10 210 432 HOH HOH . 
G 6 HOH B 11 211 404 HOH HOH . 
G 6 HOH B 12 212 484 HOH HOH . 
G 6 HOH B 13 213 492 HOH HOH . 
G 6 HOH B 14 214 413 HOH HOH . 
G 6 HOH B 15 215 417 HOH HOH . 
G 6 HOH B 16 216 451 HOH HOH . 
G 6 HOH B 17 217 414 HOH HOH . 
G 6 HOH B 18 218 440 HOH HOH . 
G 6 HOH B 19 219 447 HOH HOH . 
G 6 HOH B 20 220 401 HOH HOH . 
G 6 HOH B 21 221 402 HOH HOH . 
G 6 HOH B 22 222 479 HOH HOH . 
G 6 HOH B 23 223 487 HOH HOH . 
G 6 HOH B 24 224 412 HOH HOH . 
G 6 HOH B 25 225 419 HOH HOH . 
G 6 HOH B 26 226 490 HOH HOH . 
G 6 HOH B 27 227 449 HOH HOH . 
G 6 HOH B 28 228 503 HOH HOH . 
H 6 HOH C 1 401 480 HOH HOH . 
H 6 HOH C 2 402 468 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 5 26.512 0.78 7.346 1 32.82 ? C1 EDO 301 C 1 
HETATM 2 O O1 EDO . . . E 5 26.141 1.338 8.597 1 31.57 ? O1 EDO 301 C 1 
HETATM 3 C C2 EDO . . . E 5 27.646 -0.189 7.579 1 32.26 ? C2 EDO 301 C 1 
HETATM 4 O O2 EDO . . . E 5 28.711 0.579 8.114 1 33.74 ? O2 EDO 301 C 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#