data_5MFP # _model_server_result.job_id w_0zsIGMJ6sqaCvTaP4YFQ _model_server_result.datetime_utc '2024-11-18 02:34:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mfp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":410}' # _entry.id 5MFP # _exptl.entry_id 5MFP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 245.279 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-pyridin-3-ylpyrrolo[1,2-a]quinoxaline _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5MFP _cell.length_a 91.38 _cell.length_b 91.38 _cell.length_c 144.148 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,X 1 1 B,N,O,P,Q,R,S,T,U,V,W,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 M N N ? 7 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 135 A CYS 141 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc2 A SG CYS 138 A CYS 144 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 A SG CYS 160 A CYS 166 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc4 A SG CYS 171 A CYS 177 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc5 B SG CYS 135 B CYS 141 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc6 B SG CYS 138 B CYS 144 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc7 B SG CYS 160 B CYS 166 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc8 B SG CYS 171 B CYS 177 1_555 O ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? # _chem_comp.formula 'C16 H11 N3' _chem_comp.formula_weight 245.279 _chem_comp.id 7M5 _chem_comp.mon_nstd_flag . _chem_comp.name 4-pyridin-3-ylpyrrolo[1,2-a]quinoxaline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C14 7M5 doub 1 n y C12 C11 7M5 sing 2 n y N28 C29 7M5 doub 3 n y N28 C26 7M5 sing 4 n y C14 C16 7M5 sing 5 n y C29 C21 7M5 sing 6 n y C26 C24 7M5 doub 7 n y N10 C11 7M5 sing 8 n y N10 C09 7M5 doub 9 n y C11 C20 7M5 doub 10 n y C21 C09 7M5 sing 11 n n C21 C22 7M5 doub 12 n y C24 C22 7M5 sing 13 n y C16 C18 7M5 doub 14 n y C09 C06 7M5 sing 15 n y C20 C18 7M5 sing 16 n y C20 N05 7M5 sing 17 n y C06 N05 7M5 sing 18 n y C06 C07 7M5 doub 19 n y N05 C03 7M5 sing 20 n y C07 C02 7M5 sing 21 n y C03 C02 7M5 doub 22 n y C12 H1 7M5 sing 23 n n C14 H2 7M5 sing 24 n n C16 H3 7M5 sing 25 n n C18 H4 7M5 sing 26 n n C22 H5 7M5 sing 27 n n C29 H6 7M5 sing 28 n n C26 H7 7M5 sing 29 n n C24 H8 7M5 sing 30 n n C07 H9 7M5 sing 31 n n C02 H10 7M5 sing 32 n n C03 H11 7M5 sing 33 n n # _atom_sites.entry_id 5MFP _atom_sites.fract_transf_matrix[1][1] 0.010943 _atom_sites.fract_transf_matrix[1][2] 0.006318 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AR6 A 1 401 500 AR6 AR6 . D 3 ZN A 1 402 501 ZN ZN . E 4 SO4 A 1 403 2 SO4 SO4 . F 4 SO4 A 1 404 4 SO4 SO4 . G 4 SO4 A 1 405 6 SO4 SO4 . H 4 SO4 A 1 406 7 SO4 SO4 . I 4 SO4 A 1 407 9 SO4 SO4 . J 5 EDO A 1 408 1 EDO EDO . K 5 EDO A 1 409 2 EDO EDO . L 6 PG4 A 1 410 1 PG4 PG4 . M 7 7M5 A 1 411 1 7M5 058 . N 2 AR6 B 1 401 500 AR6 AR6 . O 3 ZN B 1 402 501 ZN ZN . P 4 SO4 B 1 403 1 SO4 SO4 . Q 4 SO4 B 1 404 3 SO4 SO4 . R 4 SO4 B 1 405 5 SO4 SO4 . S 4 SO4 B 1 406 8 SO4 SO4 . T 8 PGE B 1 407 1 PGE PGE . U 5 EDO B 1 408 3 EDO EDO . V 5 EDO B 1 409 4 EDO EDO . W 7 7M5 B 1 410 2 7M5 058 . X 9 HOH A 1 501 155 HOH HOH . X 9 HOH A 2 502 135 HOH HOH . X 9 HOH A 3 503 108 HOH HOH . X 9 HOH A 4 504 137 HOH HOH . X 9 HOH A 5 505 32 HOH HOH . X 9 HOH A 6 506 152 HOH HOH . X 9 HOH A 7 507 69 HOH HOH . X 9 HOH A 8 508 1 HOH HOH . X 9 HOH A 9 509 174 HOH HOH . X 9 HOH A 10 510 53 HOH HOH . X 9 HOH A 11 511 44 HOH HOH . X 9 HOH A 12 512 52 HOH HOH . X 9 HOH A 13 513 66 HOH HOH . X 9 HOH A 14 514 82 HOH HOH . X 9 HOH A 15 515 163 HOH HOH . X 9 HOH A 16 516 138 HOH HOH . X 9 HOH A 17 517 33 HOH HOH . X 9 HOH A 18 518 176 HOH HOH . X 9 HOH A 19 519 64 HOH HOH . X 9 HOH A 20 520 169 HOH HOH . X 9 HOH A 21 521 11 HOH HOH . X 9 HOH A 22 522 23 HOH HOH . X 9 HOH A 23 523 132 HOH HOH . X 9 HOH A 24 524 48 HOH HOH . X 9 HOH A 25 525 157 HOH HOH . X 9 HOH A 26 526 35 HOH HOH . X 9 HOH A 27 527 127 HOH HOH . X 9 HOH A 28 528 96 HOH HOH . X 9 HOH A 29 529 21 HOH HOH . X 9 HOH A 30 530 148 HOH HOH . X 9 HOH A 31 531 43 HOH HOH . X 9 HOH A 32 532 39 HOH HOH . X 9 HOH A 33 533 65 HOH HOH . X 9 HOH A 34 534 78 HOH HOH . X 9 HOH A 35 535 92 HOH HOH . X 9 HOH A 36 536 84 HOH HOH . X 9 HOH A 37 537 115 HOH HOH . X 9 HOH A 38 538 91 HOH HOH . X 9 HOH A 39 539 126 HOH HOH . X 9 HOH A 40 540 24 HOH HOH . X 9 HOH A 41 541 9 HOH HOH . X 9 HOH A 42 542 61 HOH HOH . X 9 HOH A 43 543 3 HOH HOH . X 9 HOH A 44 544 114 HOH HOH . X 9 HOH A 45 545 56 HOH HOH . X 9 HOH A 46 546 167 HOH HOH . X 9 HOH A 47 547 50 HOH HOH . X 9 HOH A 48 548 77 HOH HOH . X 9 HOH A 49 549 98 HOH HOH . X 9 HOH A 50 550 159 HOH HOH . X 9 HOH A 51 551 143 HOH HOH . X 9 HOH A 52 552 51 HOH HOH . X 9 HOH A 53 553 59 HOH HOH . X 9 HOH A 54 554 16 HOH HOH . X 9 HOH A 55 555 88 HOH HOH . X 9 HOH A 56 556 47 HOH HOH . X 9 HOH A 57 557 177 HOH HOH . X 9 HOH A 58 558 8 HOH HOH . X 9 HOH A 59 559 112 HOH HOH . X 9 HOH A 60 560 113 HOH HOH . X 9 HOH A 61 561 10 HOH HOH . X 9 HOH A 62 562 73 HOH HOH . X 9 HOH A 63 563 83 HOH HOH . X 9 HOH A 64 564 5 HOH HOH . X 9 HOH A 65 565 6 HOH HOH . X 9 HOH A 66 566 146 HOH HOH . X 9 HOH A 67 567 67 HOH HOH . X 9 HOH A 68 568 130 HOH HOH . X 9 HOH A 69 569 139 HOH HOH . X 9 HOH A 70 570 71 HOH HOH . X 9 HOH A 71 571 105 HOH HOH . X 9 HOH A 72 572 29 HOH HOH . X 9 HOH A 73 573 54 HOH HOH . X 9 HOH A 74 574 122 HOH HOH . X 9 HOH A 75 575 93 HOH HOH . X 9 HOH A 76 576 166 HOH HOH . X 9 HOH A 77 577 106 HOH HOH . X 9 HOH A 78 578 7 HOH HOH . X 9 HOH A 79 579 36 HOH HOH . X 9 HOH A 80 580 27 HOH HOH . X 9 HOH A 81 581 164 HOH HOH . X 9 HOH A 82 582 75 HOH HOH . X 9 HOH A 83 583 58 HOH HOH . X 9 HOH A 84 584 34 HOH HOH . X 9 HOH A 85 585 124 HOH HOH . X 9 HOH A 86 586 15 HOH HOH . X 9 HOH A 87 587 76 HOH HOH . X 9 HOH A 88 588 85 HOH HOH . X 9 HOH A 89 589 142 HOH HOH . X 9 HOH A 90 590 147 HOH HOH . X 9 HOH A 91 591 162 HOH HOH . X 9 HOH A 92 592 57 HOH HOH . X 9 HOH A 93 593 109 HOH HOH . X 9 HOH A 94 594 151 HOH HOH . X 9 HOH A 95 595 153 HOH HOH . X 9 HOH A 96 596 86 HOH HOH . X 9 HOH A 97 597 133 HOH HOH . X 9 HOH A 98 598 131 HOH HOH . X 9 HOH A 99 599 118 HOH HOH . X 9 HOH A 100 600 121 HOH HOH . Y 9 HOH B 1 501 178 HOH HOH . Y 9 HOH B 2 502 94 HOH HOH . Y 9 HOH B 3 503 99 HOH HOH . Y 9 HOH B 4 504 107 HOH HOH . Y 9 HOH B 5 505 68 HOH HOH . Y 9 HOH B 6 506 116 HOH HOH . Y 9 HOH B 7 507 141 HOH HOH . Y 9 HOH B 8 508 74 HOH HOH . Y 9 HOH B 9 509 158 HOH HOH . Y 9 HOH B 10 510 79 HOH HOH . Y 9 HOH B 11 511 170 HOH HOH . Y 9 HOH B 12 512 4 HOH HOH . Y 9 HOH B 13 513 37 HOH HOH . Y 9 HOH B 14 514 103 HOH HOH . Y 9 HOH B 15 515 12 HOH HOH . Y 9 HOH B 16 516 22 HOH HOH . Y 9 HOH B 17 517 72 HOH HOH . Y 9 HOH B 18 518 70 HOH HOH . Y 9 HOH B 19 519 104 HOH HOH . Y 9 HOH B 20 520 136 HOH HOH . Y 9 HOH B 21 521 90 HOH HOH . Y 9 HOH B 22 522 31 HOH HOH . Y 9 HOH B 23 523 154 HOH HOH . Y 9 HOH B 24 524 40 HOH HOH . Y 9 HOH B 25 525 60 HOH HOH . Y 9 HOH B 26 526 19 HOH HOH . Y 9 HOH B 27 527 172 HOH HOH . Y 9 HOH B 28 528 41 HOH HOH . Y 9 HOH B 29 529 62 HOH HOH . Y 9 HOH B 30 530 26 HOH HOH . Y 9 HOH B 31 531 128 HOH HOH . Y 9 HOH B 32 532 111 HOH HOH . Y 9 HOH B 33 533 2 HOH HOH . Y 9 HOH B 34 534 150 HOH HOH . Y 9 HOH B 35 535 110 HOH HOH . Y 9 HOH B 36 536 101 HOH HOH . Y 9 HOH B 37 537 117 HOH HOH . Y 9 HOH B 38 538 45 HOH HOH . Y 9 HOH B 39 539 18 HOH HOH . Y 9 HOH B 40 540 46 HOH HOH . Y 9 HOH B 41 541 87 HOH HOH . Y 9 HOH B 42 542 89 HOH HOH . Y 9 HOH B 43 543 42 HOH HOH . Y 9 HOH B 44 544 38 HOH HOH . Y 9 HOH B 45 545 30 HOH HOH . Y 9 HOH B 46 546 14 HOH HOH . Y 9 HOH B 47 547 145 HOH HOH . Y 9 HOH B 48 548 140 HOH HOH . Y 9 HOH B 49 549 13 HOH HOH . Y 9 HOH B 50 550 100 HOH HOH . Y 9 HOH B 51 551 156 HOH HOH . Y 9 HOH B 52 552 80 HOH HOH . Y 9 HOH B 53 553 144 HOH HOH . Y 9 HOH B 54 554 168 HOH HOH . Y 9 HOH B 55 555 134 HOH HOH . Y 9 HOH B 56 556 129 HOH HOH . Y 9 HOH B 57 557 81 HOH HOH . Y 9 HOH B 58 558 25 HOH HOH . Y 9 HOH B 59 559 123 HOH HOH . Y 9 HOH B 60 560 125 HOH HOH . Y 9 HOH B 61 561 120 HOH HOH . Y 9 HOH B 62 562 149 HOH HOH . Y 9 HOH B 63 563 49 HOH HOH . Y 9 HOH B 64 564 20 HOH HOH . Y 9 HOH B 65 565 102 HOH HOH . Y 9 HOH B 66 566 161 HOH HOH . Y 9 HOH B 67 567 55 HOH HOH . Y 9 HOH B 68 568 95 HOH HOH . Y 9 HOH B 69 569 28 HOH HOH . Y 9 HOH B 70 570 97 HOH HOH . Y 9 HOH B 71 571 63 HOH HOH . Y 9 HOH B 72 572 17 HOH HOH . Y 9 HOH B 73 573 165 HOH HOH . Y 9 HOH B 74 574 119 HOH HOH . Y 9 HOH B 75 575 160 HOH HOH . Y 9 HOH B 76 576 173 HOH HOH . Y 9 HOH B 77 577 175 HOH HOH . Y 9 HOH B 78 578 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 7M5 . . . W 7 125.787 12.308 -45.005 1 50.49 ? C11 7M5 410 B 1 HETATM 2 C C12 7M5 . . . W 7 126.385 11.879 -43.807 1 54.9 ? C12 7M5 410 B 1 HETATM 3 C C14 7M5 . . . W 7 127.496 11.044 -43.846 1 51.12 ? C14 7M5 410 B 1 HETATM 4 C C16 7M5 . . . W 7 127.942 10.535 -45.049 1 50.44 ? C16 7M5 410 B 1 HETATM 5 C C18 7M5 . . . W 7 127.396 10.985 -46.258 1 54.99 ? C18 7M5 410 B 1 HETATM 6 C C20 7M5 . . . W 7 126.29 11.847 -46.23 1 47.56 ? C20 7M5 410 B 1 HETATM 7 C C21 7M5 . . . W 7 122.962 14.478 -45.834 1 35.57 ? C21 7M5 410 B 1 HETATM 8 C C22 7M5 . . . W 7 121.724 14.09 -46.342 1 30.59 ? C22 7M5 410 B 1 HETATM 9 N N28 7M5 . . . W 7 121.882 16.337 -44.675 1 31.08 ? N28 7M5 410 B 1 HETATM 10 C C29 7M5 . . . W 7 122.986 15.562 -44.961 1 30.77 ? C29 7M5 410 B 1 HETATM 11 C C26 7M5 . . . W 7 120.717 15.958 -45.235 1 33.81 ? C26 7M5 410 B 1 HETATM 12 C C24 7M5 . . . W 7 120.601 14.871 -46.085 1 29.3 ? C24 7M5 410 B 1 HETATM 13 C C09 7M5 . . . W 7 124.15 13.629 -46.037 1 47.65 ? C09 7M5 410 B 1 HETATM 14 C C06 7M5 . . . W 7 124.543 13.205 -47.354 1 50.01 ? C06 7M5 410 B 1 HETATM 15 C C07 7M5 . . . W 7 124.161 13.475 -48.602 1 51.24 ? C07 7M5 410 B 1 HETATM 16 C C02 7M5 . . . W 7 124.968 12.766 -49.64 1 47.08 ? C02 7M5 410 B 1 HETATM 17 C C03 7M5 . . . W 7 125.983 11.999 -48.806 1 53.01 ? C03 7M5 410 B 1 HETATM 18 N N05 7M5 . . . W 7 125.654 12.308 -47.405 1 49.86 ? N05 7M5 410 B 1 HETATM 19 N N10 7M5 . . . W 7 124.713 13.19 -44.939 1 53.56 ? N10 7M5 410 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 383 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #