data_5MG8
#
_model_server_result.job_id            DuT-2VgA0ozEVePs9P4F6w 
_model_server_result.datetime_utc      '2024-11-05 00:30:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mg8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":703}' 
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_entry.id    5MG8 
#
_exptl.entry_id    5MG8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MG8 
_cell.length_a            172.564 
_cell.length_b            196.455 
_cell.length_c            122.44 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MG8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,R,S 1 1 
C,D,J,K,L,M,N,O,P,Q,T,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 I N N 
? 4 P N N 
? 4 Q N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5MG8 
_atom_sites.fract_transf_matrix[1][1]    0.005795 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00509 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008167 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 A 1 701 7 SO4 SO4 . 
F 3 SO4 A 1 702 8 SO4 SO4 . 
G 4 GOL A 1 703 5 GOL GOL . 
H 3 SO4 B 1 801 9 SO4 SO4 . 
I 4 GOL B 1 802 7 GOL GOL . 
J 3 SO4 C 1 701 1 SO4 SO4 . 
K 3 SO4 C 1 702 2 SO4 SO4 . 
L 3 SO4 C 1 703 11 SO4 SO4 . 
M 3 SO4 C 1 704 12 SO4 SO4 . 
N 3 SO4 D 1 801 10 SO4 SO4 . 
O 3 SO4 D 1 802 13 SO4 SO4 . 
P 4 GOL D 1 803 6 GOL GOL . 
Q 4 GOL D 1 804 8 GOL GOL . 
R 5 HOH A 1 801 209 HOH HOH . 
R 5 HOH A 2 802 203 HOH HOH . 
R 5 HOH A 3 803 100 HOH HOH . 
R 5 HOH A 4 804 208 HOH HOH . 
R 5 HOH A 5 805 180 HOH HOH . 
R 5 HOH A 6 806 46 HOH HOH . 
R 5 HOH A 7 807 35 HOH HOH . 
R 5 HOH A 8 808 31 HOH HOH . 
R 5 HOH A 9 809 82 HOH HOH . 
R 5 HOH A 10 810 200 HOH HOH . 
R 5 HOH A 11 811 29 HOH HOH . 
R 5 HOH A 12 812 205 HOH HOH . 
R 5 HOH A 13 813 44 HOH HOH . 
R 5 HOH A 14 814 204 HOH HOH . 
R 5 HOH A 15 815 213 HOH HOH . 
R 5 HOH A 16 816 202 HOH HOH . 
R 5 HOH A 17 817 48 HOH HOH . 
R 5 HOH A 18 818 174 HOH HOH . 
R 5 HOH A 19 819 201 HOH HOH . 
R 5 HOH A 20 820 140 HOH HOH . 
R 5 HOH A 21 821 134 HOH HOH . 
R 5 HOH A 22 822 181 HOH HOH . 
S 5 HOH B 1 901 214 HOH HOH . 
S 5 HOH B 2 902 212 HOH HOH . 
S 5 HOH B 3 903 210 HOH HOH . 
S 5 HOH B 4 904 195 HOH HOH . 
S 5 HOH B 5 905 207 HOH HOH . 
S 5 HOH B 6 906 49 HOH HOH . 
S 5 HOH B 7 907 89 HOH HOH . 
S 5 HOH B 8 908 206 HOH HOH . 
S 5 HOH B 9 909 211 HOH HOH . 
S 5 HOH B 10 910 11 HOH HOH . 
S 5 HOH B 11 911 61 HOH HOH . 
S 5 HOH B 12 912 6 HOH HOH . 
S 5 HOH B 13 913 216 HOH HOH . 
S 5 HOH B 14 914 3 HOH HOH . 
S 5 HOH B 15 915 84 HOH HOH . 
S 5 HOH B 16 916 52 HOH HOH . 
S 5 HOH B 17 917 12 HOH HOH . 
S 5 HOH B 18 918 176 HOH HOH . 
S 5 HOH B 19 919 90 HOH HOH . 
S 5 HOH B 20 920 67 HOH HOH . 
S 5 HOH B 21 921 50 HOH HOH . 
S 5 HOH B 22 922 215 HOH HOH . 
S 5 HOH B 23 923 20 HOH HOH . 
S 5 HOH B 24 924 182 HOH HOH . 
S 5 HOH B 25 925 91 HOH HOH . 
S 5 HOH B 26 926 217 HOH HOH . 
S 5 HOH B 27 927 28 HOH HOH . 
S 5 HOH B 28 928 75 HOH HOH . 
S 5 HOH B 29 929 198 HOH HOH . 
T 5 HOH C 1 801 175 HOH HOH . 
T 5 HOH C 2 802 40 HOH HOH . 
T 5 HOH C 3 803 199 HOH HOH . 
T 5 HOH C 4 804 63 HOH HOH . 
T 5 HOH C 5 805 15 HOH HOH . 
T 5 HOH C 6 806 41 HOH HOH . 
T 5 HOH C 7 807 65 HOH HOH . 
T 5 HOH C 8 808 224 HOH HOH . 
T 5 HOH C 9 809 225 HOH HOH . 
T 5 HOH C 10 810 145 HOH HOH . 
T 5 HOH C 11 811 141 HOH HOH . 
T 5 HOH C 12 812 66 HOH HOH . 
T 5 HOH C 13 813 152 HOH HOH . 
T 5 HOH C 14 814 223 HOH HOH . 
T 5 HOH C 15 815 26 HOH HOH . 
T 5 HOH C 16 816 4 HOH HOH . 
T 5 HOH C 17 817 33 HOH HOH . 
T 5 HOH C 18 818 39 HOH HOH . 
T 5 HOH C 19 819 30 HOH HOH . 
U 5 HOH D 1 901 226 HOH HOH . 
U 5 HOH D 2 902 230 HOH HOH . 
U 5 HOH D 3 903 56 HOH HOH . 
U 5 HOH D 4 904 229 HOH HOH . 
U 5 HOH D 5 905 219 HOH HOH . 
U 5 HOH D 6 906 158 HOH HOH . 
U 5 HOH D 7 907 221 HOH HOH . 
U 5 HOH D 8 908 222 HOH HOH . 
U 5 HOH D 9 909 232 HOH HOH . 
U 5 HOH D 10 910 21 HOH HOH . 
U 5 HOH D 11 911 53 HOH HOH . 
U 5 HOH D 12 912 146 HOH HOH . 
U 5 HOH D 13 913 9 HOH HOH . 
U 5 HOH D 14 914 231 HOH HOH . 
U 5 HOH D 15 915 73 HOH HOH . 
U 5 HOH D 16 916 54 HOH HOH . 
U 5 HOH D 17 917 74 HOH HOH . 
U 5 HOH D 18 918 64 HOH HOH . 
U 5 HOH D 19 919 228 HOH HOH . 
U 5 HOH D 20 920 227 HOH HOH . 
U 5 HOH D 21 921 167 HOH HOH . 
U 5 HOH D 22 922 43 HOH HOH . 
U 5 HOH D 23 923 118 HOH HOH . 
U 5 HOH D 24 924 8 HOH HOH . 
U 5 HOH D 25 925 171 HOH HOH . 
U 5 HOH D 26 926 13 HOH HOH . 
U 5 HOH D 27 927 10 HOH HOH . 
U 5 HOH D 28 928 57 HOH HOH . 
U 5 HOH D 29 929 5 HOH HOH . 
U 5 HOH D 30 930 34 HOH HOH . 
U 5 HOH D 31 931 2 HOH HOH . 
U 5 HOH D 32 932 233 HOH HOH . 
U 5 HOH D 33 933 218 HOH HOH . 
U 5 HOH D 34 934 162 HOH HOH . 
U 5 HOH D 35 935 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 4 96.562 32.7 -20.886 1 88.9 ? C1 GOL 703 A 1 
HETATM 2 O O1 GOL . . . G 4 97.542 31.719 -21.146 1 87.04 ? O1 GOL 703 A 1 
HETATM 3 C C2 GOL . . . G 4 96.654 33.801 -21.937 1 91.98 ? C2 GOL 703 A 1 
HETATM 4 O O2 GOL . . . G 4 95.825 34.877 -21.557 1 95.88 ? O2 GOL 703 A 1 
HETATM 5 C C3 GOL . . . G 4 98.094 34.288 -22.023 1 87.14 ? C3 GOL 703 A 1 
HETATM 6 O O3 GOL . . . G 4 98.216 35.283 -23.013 1 81.48 ? O3 GOL 703 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#