data_5MGB
#
_model_server_result.job_id            h70ZJOxB4B7t13Effm9rmw 
_model_server_result.datetime_utc      '2024-10-12 19:26:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mgb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":802}' 
#
_entry.id    5MGB 
#
_exptl.entry_id    5MGB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              851.607 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETOACETYL-COENZYME A' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MGB 
_cell.length_a            65.23 
_cell.length_b            125.82 
_cell.length_c            223.9 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MGB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,M 1 1 
B,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 K N N 
#
_chem_comp.formula           'C25 H40 N7 O18 P3 S' 
_chem_comp.formula_weight    851.607 
_chem_comp.id                CAA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETOACETYL-COENZYME A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A CAA sing 70 n y 
N1A C6A CAA doub 71 n y 
C2A N3A CAA doub 72 n y 
C2A H2A CAA sing 73 n n 
N3A C4A CAA sing 74 n y 
C4A C5A CAA doub 75 n y 
C4A N9A CAA sing 76 n y 
C5A C6A CAA sing 77 n y 
C5A N7A CAA sing 78 n y 
C6A N6A CAA sing 79 n n 
N6A H61A CAA sing 80 n n 
N6A H62A CAA sing 81 n n 
N7A C8A CAA doub 82 n y 
C8A N9A CAA sing 83 n y 
C8A H8A CAA sing 84 n n 
N9A C1B CAA sing 85 n n 
C1B C2B CAA sing 86 n n 
C1B O4B CAA sing 87 n n 
C1B H1B CAA sing 88 n n 
C2B O2B CAA sing 89 n n 
C2B C3B CAA sing 90 n n 
C2B H2B CAA sing 91 n n 
O2B HO2A CAA sing 92 n n 
C3B O3B CAA sing 93 n n 
C3B C4B CAA sing 94 n n 
C3B H3B CAA sing 95 n n 
O3B P3B CAA sing 96 n n 
P3B O7A CAA doub 97 n n 
P3B O8A CAA sing 98 n n 
P3B O9A CAA sing 99 n n 
O8A HOA8 CAA sing 100 n n 
O9A HOA9 CAA sing 101 n n 
C4B O4B CAA sing 102 n n 
C4B C5B CAA sing 103 n n 
C4B H4B CAA sing 104 n n 
C5B O5B CAA sing 105 n n 
C5B H51A CAA sing 106 n n 
C5B H52A CAA sing 107 n n 
O5B P1A CAA sing 108 n n 
P1A O1A CAA doub 109 n n 
P1A O2A CAA sing 110 n n 
P1A O3A CAA sing 111 n n 
O2A HOA2 CAA sing 112 n n 
O3A P2A CAA sing 113 n n 
P2A O4A CAA doub 114 n n 
P2A O5A CAA sing 115 n n 
P2A O6A CAA sing 116 n n 
O5A HOA5 CAA sing 117 n n 
O6A CCP CAA sing 118 n n 
CBP CCP CAA sing 119 n n 
CBP CDP CAA sing 120 n n 
CBP CEP CAA sing 121 n n 
CBP CAP CAA sing 122 n n 
CCP H121 CAA sing 123 n n 
CCP H122 CAA sing 124 n n 
CDP H131 CAA sing 125 n n 
CDP H132 CAA sing 126 n n 
CDP H133 CAA sing 127 n n 
CEP H141 CAA sing 128 n n 
CEP H142 CAA sing 129 n n 
CEP H143 CAA sing 130 n n 
CAP OAP CAA sing 131 n n 
CAP C9P CAA sing 132 n n 
CAP H10 CAA sing 133 n n 
OAP HO1 CAA sing 134 n n 
C9P O9P CAA doub 135 n n 
C9P N8P CAA sing 136 n n 
N8P C7P CAA sing 137 n n 
N8P HN8 CAA sing 138 n n 
C7P C6P CAA sing 139 n n 
C7P H71 CAA sing 140 n n 
C7P H72 CAA sing 141 n n 
C6P C5P CAA sing 142 n n 
C6P H61 CAA sing 143 n n 
C6P H62 CAA sing 144 n n 
C5P O5P CAA doub 145 n n 
C5P N4P CAA sing 146 n n 
N4P C3P CAA sing 147 n n 
N4P HN4 CAA sing 148 n n 
C3P C2P CAA sing 149 n n 
C3P H31 CAA sing 150 n n 
C3P H32 CAA sing 151 n n 
C2P S1P CAA sing 152 n n 
C2P H21 CAA sing 153 n n 
C2P H22 CAA sing 154 n n 
S1P C1 CAA sing 155 n n 
C1 O1 CAA doub 156 n n 
C1 C2 CAA sing 157 n n 
C2 C3 CAA sing 158 n n 
C2 "H2'1" CAA sing 159 n n 
C2 "H2'2" CAA sing 160 n n 
C3 O3 CAA doub 161 n n 
C3 C4 CAA sing 162 n n 
C4 "H4'1" CAA sing 163 n n 
C4 "H4'2" CAA sing 164 n n 
C4 "H4'3" CAA sing 165 n n 
#
_atom_sites.entry_id                     5MGB 
_atom_sites.fract_transf_matrix[1][1]    0.01533 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007948 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004466 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 801 1 SO4 SO4 . 
D 2 SO4 A 1 802 2 SO4 SO4 . 
E 2 SO4 A 1 803 4 SO4 SO4 . 
F 3 CAA A 1 804 300 CAA CAA . 
G 4 NAD A 1 805 1 NAD NAD . 
H 5 GOL A 1 806 1 GOL GOL . 
I 5 GOL A 1 807 2 GOL GOL . 
J 2 SO4 B 1 801 3 SO4 SO4 . 
K 3 CAA B 1 802 300 CAA CAA . 
L 4 NAD B 1 803 1 NAD NAD . 
M 6 HOH A 1 901 44 HOH HOH . 
M 6 HOH A 2 902 40 HOH HOH . 
M 6 HOH A 3 903 67 HOH HOH . 
M 6 HOH A 4 904 81 HOH HOH . 
M 6 HOH A 5 905 90 HOH HOH . 
M 6 HOH A 6 906 4 HOH HOH . 
M 6 HOH A 7 907 34 HOH HOH . 
M 6 HOH A 8 908 53 HOH HOH . 
M 6 HOH A 9 909 3 HOH HOH . 
M 6 HOH A 10 910 35 HOH HOH . 
M 6 HOH A 11 911 17 HOH HOH . 
M 6 HOH A 12 912 85 HOH HOH . 
M 6 HOH A 13 913 19 HOH HOH . 
M 6 HOH A 14 914 26 HOH HOH . 
M 6 HOH A 15 915 74 HOH HOH . 
M 6 HOH A 16 916 78 HOH HOH . 
M 6 HOH A 17 917 73 HOH HOH . 
M 6 HOH A 18 918 71 HOH HOH . 
M 6 HOH A 19 919 14 HOH HOH . 
M 6 HOH A 20 920 36 HOH HOH . 
M 6 HOH A 21 921 38 HOH HOH . 
M 6 HOH A 22 922 13 HOH HOH . 
M 6 HOH A 23 923 93 HOH HOH . 
M 6 HOH A 24 924 96 HOH HOH . 
M 6 HOH A 25 925 59 HOH HOH . 
M 6 HOH A 26 926 45 HOH HOH . 
M 6 HOH A 27 927 88 HOH HOH . 
M 6 HOH A 28 928 29 HOH HOH . 
M 6 HOH A 29 929 80 HOH HOH . 
M 6 HOH A 30 930 69 HOH HOH . 
M 6 HOH A 31 931 25 HOH HOH . 
M 6 HOH A 32 932 20 HOH HOH . 
M 6 HOH A 33 933 9 HOH HOH . 
M 6 HOH A 34 934 89 HOH HOH . 
M 6 HOH A 35 935 50 HOH HOH . 
M 6 HOH A 36 936 22 HOH HOH . 
M 6 HOH A 37 937 11 HOH HOH . 
M 6 HOH A 38 938 23 HOH HOH . 
M 6 HOH A 39 939 30 HOH HOH . 
M 6 HOH A 40 940 94 HOH HOH . 
M 6 HOH A 41 941 92 HOH HOH . 
M 6 HOH A 42 942 21 HOH HOH . 
M 6 HOH A 43 943 60 HOH HOH . 
M 6 HOH A 44 944 10 HOH HOH . 
M 6 HOH A 45 945 7 HOH HOH . 
M 6 HOH A 46 946 76 HOH HOH . 
M 6 HOH A 47 947 18 HOH HOH . 
M 6 HOH A 48 948 65 HOH HOH . 
M 6 HOH A 49 949 77 HOH HOH . 
M 6 HOH A 50 950 95 HOH HOH . 
M 6 HOH A 51 951 84 HOH HOH . 
M 6 HOH A 52 952 43 HOH HOH . 
M 6 HOH A 53 953 63 HOH HOH . 
M 6 HOH A 54 954 41 HOH HOH . 
M 6 HOH A 55 955 79 HOH HOH . 
M 6 HOH A 56 956 82 HOH HOH . 
N 6 HOH B 1 901 58 HOH HOH . 
N 6 HOH B 2 902 16 HOH HOH . 
N 6 HOH B 3 903 51 HOH HOH . 
N 6 HOH B 4 904 68 HOH HOH . 
N 6 HOH B 5 905 57 HOH HOH . 
N 6 HOH B 6 906 32 HOH HOH . 
N 6 HOH B 7 907 52 HOH HOH . 
N 6 HOH B 8 908 91 HOH HOH . 
N 6 HOH B 9 909 66 HOH HOH . 
N 6 HOH B 10 910 24 HOH HOH . 
N 6 HOH B 11 911 46 HOH HOH . 
N 6 HOH B 12 912 64 HOH HOH . 
N 6 HOH B 13 913 37 HOH HOH . 
N 6 HOH B 14 914 5 HOH HOH . 
N 6 HOH B 15 915 28 HOH HOH . 
N 6 HOH B 16 916 12 HOH HOH . 
N 6 HOH B 17 917 48 HOH HOH . 
N 6 HOH B 18 918 15 HOH HOH . 
N 6 HOH B 19 919 39 HOH HOH . 
N 6 HOH B 20 920 72 HOH HOH . 
N 6 HOH B 21 921 56 HOH HOH . 
N 6 HOH B 22 922 55 HOH HOH . 
N 6 HOH B 23 923 47 HOH HOH . 
N 6 HOH B 24 924 8 HOH HOH . 
N 6 HOH B 25 925 27 HOH HOH . 
N 6 HOH B 26 926 75 HOH HOH . 
N 6 HOH B 27 927 33 HOH HOH . 
N 6 HOH B 28 928 54 HOH HOH . 
N 6 HOH B 29 929 1 HOH HOH . 
N 6 HOH B 30 930 2 HOH HOH . 
N 6 HOH B 31 931 6 HOH HOH . 
N 6 HOH B 32 932 70 HOH HOH . 
N 6 HOH B 33 933 86 HOH HOH . 
N 6 HOH B 34 934 49 HOH HOH . 
N 6 HOH B 35 935 87 HOH HOH . 
N 6 HOH B 36 936 62 HOH HOH . 
N 6 HOH B 37 937 31 HOH HOH . 
N 6 HOH B 38 938 42 HOH HOH . 
N 6 HOH B 39 939 83 HOH HOH . 
N 6 HOH B 40 940 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A CAA . . . K 3 -41.918 19.946 -19.604 1 54.31 ? N1A CAA 802 B 1 
HETATM 2 C C2A CAA . . . K 3 -40.877 20.806 -19.536 1 54.58 ? C2A CAA 802 B 1 
HETATM 3 N N3A CAA . . . K 3 -40.764 21.887 -20.326 1 53.24 ? N3A CAA 802 B 1 
HETATM 4 C C4A CAA . . . K 3 -41.706 22.18 -21.249 1 53.39 ? C4A CAA 802 B 1 
HETATM 5 C C5A CAA . . . K 3 -42.868 21.294 -21.393 1 55.06 ? C5A CAA 802 B 1 
HETATM 6 C C6A CAA . . . K 3 -42.927 20.115 -20.484 1 54.21 ? C6A CAA 802 B 1 
HETATM 7 N N6A CAA . . . K 3 -43.947 19.232 -20.526 1 54.64 ? N6A CAA 802 B 1 
HETATM 8 N N7A CAA . . . K 3 -43.62 21.831 -22.377 1 55.71 ? N7A CAA 802 B 1 
HETATM 9 C C8A CAA . . . K 3 -42.99 22.953 -22.822 1 54.82 ? C8A CAA 802 B 1 
HETATM 10 N N9A CAA . . . K 3 -41.849 23.148 -22.143 1 54.39 ? N9A CAA 802 B 1 
HETATM 11 C C1B CAA . . . K 3 -40.886 24.258 -22.311 1 54.89 ? C1B CAA 802 B 1 
HETATM 12 C C2B CAA . . . K 3 -40.176 24.237 -23.645 1 55.24 ? C2B CAA 802 B 1 
HETATM 13 O O2B CAA . . . K 3 -39.099 23.292 -23.634 1 55.38 ? O2B CAA 802 B 1 
HETATM 14 C C3B CAA . . . K 3 -39.706 25.674 -23.721 1 56.57 ? C3B CAA 802 B 1 
HETATM 15 O O3B CAA . . . K 3 -38.46 25.777 -23.01 1 59.45 ? O3B CAA 802 B 1 
HETATM 16 P P3B CAA . . . K 3 -37.378 26.974 -23.127 1 58.32 ? P3B CAA 802 B 1 
HETATM 17 O O7A CAA . . . K 3 -36.094 26.249 -23.483 1 54.99 ? O7A CAA 802 B 1 
HETATM 18 O O8A CAA . . . K 3 -37.902 27.844 -24.247 1 59.97 ? O8A CAA 802 B 1 
HETATM 19 O O9A CAA . . . K 3 -37.419 27.632 -21.762 1 54.33 ? O9A CAA 802 B 1 
HETATM 20 C C4B CAA . . . K 3 -40.807 26.468 -23.021 1 55.86 ? C4B CAA 802 B 1 
HETATM 21 O O4B CAA . . . K 3 -41.535 25.525 -22.239 1 54.92 ? O4B CAA 802 B 1 
HETATM 22 C C5B CAA . . . K 3 -41.783 27.184 -23.954 1 56.14 ? C5B CAA 802 B 1 
HETATM 23 O O5B CAA . . . K 3 -42.393 26.28 -24.881 1 56.7 ? O5B CAA 802 B 1 
HETATM 24 P P1A CAA . . . K 3 -42.236 26.452 -26.483 1 57.52 ? P1A CAA 802 B 1 
HETATM 25 O O1A CAA . . . K 3 -40.862 26.995 -26.806 1 63.16 ? O1A CAA 802 B 1 
HETATM 26 O O2A CAA . . . K 3 -42.628 25.171 -27.17 1 55.65 ? O2A CAA 802 B 1 
HETATM 27 O O3A CAA . . . K 3 -43.282 27.624 -26.835 1 59.89 ? O3A CAA 802 B 1 
HETATM 28 P P2A CAA . . . K 3 -44.891 27.523 -26.73 1 64.84 ? P2A CAA 802 B 1 
HETATM 29 O O4A CAA . . . K 3 -45.322 28.457 -25.614 1 64.92 ? O4A CAA 802 B 1 
HETATM 30 O O5A CAA . . . K 3 -45.47 27.682 -28.119 1 59.6 ? O5A CAA 802 B 1 
HETATM 31 O O6A CAA . . . K 3 -45.226 26.017 -26.264 1 64.24 ? O6A CAA 802 B 1 
HETATM 32 C CBP CAA . . . K 3 -46.677 24.062 -26.05 1 58.21 ? CBP CAA 802 B 1 
HETATM 33 C CCP CAA . . . K 3 -46.533 25.502 -26.511 1 61 ? CCP CAA 802 B 1 
HETATM 34 C CDP CAA . . . K 3 -48.046 23.589 -26.526 1 59.88 ? CDP CAA 802 B 1 
HETATM 35 C CEP CAA . . . K 3 -46.628 24.009 -24.53 1 55.4 ? CEP CAA 802 B 1 
HETATM 36 C CAP CAA . . . K 3 -45.548 23.239 -26.706 1 56.61 ? CAP CAA 802 B 1 
HETATM 37 O OAP CAA . . . K 3 -44.322 23.465 -26.004 1 58.27 ? OAP CAA 802 B 1 
HETATM 38 C C9P CAA . . . K 3 -45.783 21.749 -26.759 1 55.44 ? C9P CAA 802 B 1 
HETATM 39 O O9P CAA . . . K 3 -46.308 21.256 -27.742 1 52.48 ? O9P CAA 802 B 1 
HETATM 40 N N8P CAA . . . K 3 -45.368 21.032 -25.714 1 54.53 ? N8P CAA 802 B 1 
HETATM 41 C C7P CAA . . . K 3 -45.488 19.591 -25.656 1 54.63 ? C7P CAA 802 B 1 
HETATM 42 C C6P CAA . . . K 3 -45.145 19.075 -24.264 1 55.53 ? C6P CAA 802 B 1 
HETATM 43 C C5P CAA . . . K 3 -45.425 17.592 -24.146 1 56.61 ? C5P CAA 802 B 1 
HETATM 44 O O5P CAA . . . K 3 -45.198 16.862 -25.101 1 56.8 ? O5P CAA 802 B 1 
HETATM 45 N N4P CAA . . . K 3 -45.896 17.16 -22.967 1 57.67 ? N4P CAA 802 B 1 
HETATM 46 C C3P CAA . . . K 3 -46.163 15.761 -22.675 1 57.99 ? C3P CAA 802 B 1 
HETATM 47 C C2P CAA . . . K 3 -46.046 15.482 -21.188 1 59.24 ? C2P CAA 802 B 1 
HETATM 48 S S1P CAA . . . K 3 -45.747 13.776 -20.856 1 59.67 ? S1P CAA 802 B 1 
HETATM 49 C C1 CAA . . . K 3 -46.398 13.552 -19.322 1 59.78 ? C1 CAA 802 B 1 
HETATM 50 O O1 CAA . . . K 3 -47.135 14.399 -18.829 1 55.53 ? O1 CAA 802 B 1 
HETATM 51 C C2 CAA . . . K 3 -46.058 12.3 -18.524 1 61.75 ? C2 CAA 802 B 1 
HETATM 52 C C3 CAA . . . K 3 -47.247 11.77 -17.749 1 61.73 ? C3 CAA 802 B 1 
HETATM 53 O O3 CAA . . . K 3 -48.028 11.003 -18.293 1 59.89 ? O3 CAA 802 B 1 
HETATM 54 C C4 CAA . . . K 3 -47.434 12.207 -16.327 1 62.54 ? C4 CAA 802 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           54 
#