data_5MGB
#
_model_server_result.job_id            OyDgJqaHk6OH5DYZavdxsQ 
_model_server_result.datetime_utc      '2024-10-12 19:22:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mgb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":807}' 
#
_entry.id    5MGB 
#
_exptl.entry_id    5MGB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MGB 
_cell.length_a            65.23 
_cell.length_b            125.82 
_cell.length_c            223.9 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MGB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,M 1 1 
B,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 I N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 225 n n 
C1 C2 GOL sing 226 n n 
C1 H11 GOL sing 227 n n 
C1 H12 GOL sing 228 n n 
O1 HO1 GOL sing 229 n n 
C2 O2 GOL sing 230 n n 
C2 C3 GOL sing 231 n n 
C2 H2 GOL sing 232 n n 
O2 HO2 GOL sing 233 n n 
C3 O3 GOL sing 234 n n 
C3 H31 GOL sing 235 n n 
C3 H32 GOL sing 236 n n 
O3 HO3 GOL sing 237 n n 
#
_atom_sites.entry_id                     5MGB 
_atom_sites.fract_transf_matrix[1][1]    0.01533 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007948 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004466 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 801 1 SO4 SO4 . 
D 2 SO4 A 1 802 2 SO4 SO4 . 
E 2 SO4 A 1 803 4 SO4 SO4 . 
F 3 CAA A 1 804 300 CAA CAA . 
G 4 NAD A 1 805 1 NAD NAD . 
H 5 GOL A 1 806 1 GOL GOL . 
I 5 GOL A 1 807 2 GOL GOL . 
J 2 SO4 B 1 801 3 SO4 SO4 . 
K 3 CAA B 1 802 300 CAA CAA . 
L 4 NAD B 1 803 1 NAD NAD . 
M 6 HOH A 1 901 44 HOH HOH . 
M 6 HOH A 2 902 40 HOH HOH . 
M 6 HOH A 3 903 67 HOH HOH . 
M 6 HOH A 4 904 81 HOH HOH . 
M 6 HOH A 5 905 90 HOH HOH . 
M 6 HOH A 6 906 4 HOH HOH . 
M 6 HOH A 7 907 34 HOH HOH . 
M 6 HOH A 8 908 53 HOH HOH . 
M 6 HOH A 9 909 3 HOH HOH . 
M 6 HOH A 10 910 35 HOH HOH . 
M 6 HOH A 11 911 17 HOH HOH . 
M 6 HOH A 12 912 85 HOH HOH . 
M 6 HOH A 13 913 19 HOH HOH . 
M 6 HOH A 14 914 26 HOH HOH . 
M 6 HOH A 15 915 74 HOH HOH . 
M 6 HOH A 16 916 78 HOH HOH . 
M 6 HOH A 17 917 73 HOH HOH . 
M 6 HOH A 18 918 71 HOH HOH . 
M 6 HOH A 19 919 14 HOH HOH . 
M 6 HOH A 20 920 36 HOH HOH . 
M 6 HOH A 21 921 38 HOH HOH . 
M 6 HOH A 22 922 13 HOH HOH . 
M 6 HOH A 23 923 93 HOH HOH . 
M 6 HOH A 24 924 96 HOH HOH . 
M 6 HOH A 25 925 59 HOH HOH . 
M 6 HOH A 26 926 45 HOH HOH . 
M 6 HOH A 27 927 88 HOH HOH . 
M 6 HOH A 28 928 29 HOH HOH . 
M 6 HOH A 29 929 80 HOH HOH . 
M 6 HOH A 30 930 69 HOH HOH . 
M 6 HOH A 31 931 25 HOH HOH . 
M 6 HOH A 32 932 20 HOH HOH . 
M 6 HOH A 33 933 9 HOH HOH . 
M 6 HOH A 34 934 89 HOH HOH . 
M 6 HOH A 35 935 50 HOH HOH . 
M 6 HOH A 36 936 22 HOH HOH . 
M 6 HOH A 37 937 11 HOH HOH . 
M 6 HOH A 38 938 23 HOH HOH . 
M 6 HOH A 39 939 30 HOH HOH . 
M 6 HOH A 40 940 94 HOH HOH . 
M 6 HOH A 41 941 92 HOH HOH . 
M 6 HOH A 42 942 21 HOH HOH . 
M 6 HOH A 43 943 60 HOH HOH . 
M 6 HOH A 44 944 10 HOH HOH . 
M 6 HOH A 45 945 7 HOH HOH . 
M 6 HOH A 46 946 76 HOH HOH . 
M 6 HOH A 47 947 18 HOH HOH . 
M 6 HOH A 48 948 65 HOH HOH . 
M 6 HOH A 49 949 77 HOH HOH . 
M 6 HOH A 50 950 95 HOH HOH . 
M 6 HOH A 51 951 84 HOH HOH . 
M 6 HOH A 52 952 43 HOH HOH . 
M 6 HOH A 53 953 63 HOH HOH . 
M 6 HOH A 54 954 41 HOH HOH . 
M 6 HOH A 55 955 79 HOH HOH . 
M 6 HOH A 56 956 82 HOH HOH . 
N 6 HOH B 1 901 58 HOH HOH . 
N 6 HOH B 2 902 16 HOH HOH . 
N 6 HOH B 3 903 51 HOH HOH . 
N 6 HOH B 4 904 68 HOH HOH . 
N 6 HOH B 5 905 57 HOH HOH . 
N 6 HOH B 6 906 32 HOH HOH . 
N 6 HOH B 7 907 52 HOH HOH . 
N 6 HOH B 8 908 91 HOH HOH . 
N 6 HOH B 9 909 66 HOH HOH . 
N 6 HOH B 10 910 24 HOH HOH . 
N 6 HOH B 11 911 46 HOH HOH . 
N 6 HOH B 12 912 64 HOH HOH . 
N 6 HOH B 13 913 37 HOH HOH . 
N 6 HOH B 14 914 5 HOH HOH . 
N 6 HOH B 15 915 28 HOH HOH . 
N 6 HOH B 16 916 12 HOH HOH . 
N 6 HOH B 17 917 48 HOH HOH . 
N 6 HOH B 18 918 15 HOH HOH . 
N 6 HOH B 19 919 39 HOH HOH . 
N 6 HOH B 20 920 72 HOH HOH . 
N 6 HOH B 21 921 56 HOH HOH . 
N 6 HOH B 22 922 55 HOH HOH . 
N 6 HOH B 23 923 47 HOH HOH . 
N 6 HOH B 24 924 8 HOH HOH . 
N 6 HOH B 25 925 27 HOH HOH . 
N 6 HOH B 26 926 75 HOH HOH . 
N 6 HOH B 27 927 33 HOH HOH . 
N 6 HOH B 28 928 54 HOH HOH . 
N 6 HOH B 29 929 1 HOH HOH . 
N 6 HOH B 30 930 2 HOH HOH . 
N 6 HOH B 31 931 6 HOH HOH . 
N 6 HOH B 32 932 70 HOH HOH . 
N 6 HOH B 33 933 86 HOH HOH . 
N 6 HOH B 34 934 49 HOH HOH . 
N 6 HOH B 35 935 87 HOH HOH . 
N 6 HOH B 36 936 62 HOH HOH . 
N 6 HOH B 37 937 31 HOH HOH . 
N 6 HOH B 38 938 42 HOH HOH . 
N 6 HOH B 39 939 83 HOH HOH . 
N 6 HOH B 40 940 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 5 -22.484 32.002 -75.691 1 62.59 ? C1 GOL 807 A 1 
HETATM 2 O O1 GOL . . . I 5 -23.82 31.598 -76.016 1 58.47 ? O1 GOL 807 A 1 
HETATM 3 C C2 GOL . . . I 5 -21.539 30.796 -75.577 1 63.61 ? C2 GOL 807 A 1 
HETATM 4 O O2 GOL . . . I 5 -21.927 29.737 -76.475 1 59.2 ? O2 GOL 807 A 1 
HETATM 5 C C3 GOL . . . I 5 -20.103 31.264 -75.869 1 62.32 ? C3 GOL 807 A 1 
HETATM 6 O O3 GOL . . . I 5 -19.164 30.18 -75.831 1 60.09 ? O3 GOL 807 A 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#