data_5MGH # _model_server_result.job_id XDlELKYE7cnlROn9-PqyeQ _model_server_result.datetime_utc '2024-11-17 10:22:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mgh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5MGH # _exptl.entry_id 5MGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.189 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MGH _cell.length_a 55.045 _cell.length_b 89.355 _cell.length_c 97.226 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H11 N O2' _chem_comp.formula_weight 165.189 _chem_comp.id PHE _chem_comp.mon_nstd_flag y _chem_comp.name PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PHE sing 237 n n N H PHE sing 238 n n N H2 PHE sing 239 n n CA C PHE sing 240 n n CA CB PHE sing 241 n n CA HA PHE sing 242 n n C O PHE doub 243 n n C OXT PHE sing 244 n n CB CG PHE sing 245 n n CB HB2 PHE sing 246 n n CB HB3 PHE sing 247 n n CG CD1 PHE doub 248 n y CG CD2 PHE sing 249 n y CD1 CE1 PHE sing 250 n y CD1 HD1 PHE sing 251 n n CD2 CE2 PHE doub 252 n y CD2 HD2 PHE sing 253 n n CE1 CZ PHE doub 254 n y CE1 HE1 PHE sing 255 n n CE2 CZ PHE sing 256 n y CE2 HE2 PHE sing 257 n n CZ HZ PHE sing 258 n n OXT HXT PHE sing 259 n n # _atom_sites.entry_id 5MGH _atom_sites.fract_transf_matrix[1][1] 0.018167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011191 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PHE A 1 501 1 PHE PHE . C 3 HOH A 1 601 154 HOH HOH . C 3 HOH A 2 602 207 HOH HOH . C 3 HOH A 3 603 197 HOH HOH . C 3 HOH A 4 604 126 HOH HOH . C 3 HOH A 5 605 241 HOH HOH . C 3 HOH A 6 606 188 HOH HOH . C 3 HOH A 7 607 182 HOH HOH . C 3 HOH A 8 608 144 HOH HOH . C 3 HOH A 9 609 70 HOH HOH . C 3 HOH A 10 610 20 HOH HOH . C 3 HOH A 11 611 202 HOH HOH . C 3 HOH A 12 612 200 HOH HOH . C 3 HOH A 13 613 94 HOH HOH . C 3 HOH A 14 614 13 HOH HOH . C 3 HOH A 15 615 93 HOH HOH . C 3 HOH A 16 616 199 HOH HOH . C 3 HOH A 17 617 121 HOH HOH . C 3 HOH A 18 618 132 HOH HOH . C 3 HOH A 19 619 39 HOH HOH . C 3 HOH A 20 620 109 HOH HOH . C 3 HOH A 21 621 111 HOH HOH . C 3 HOH A 22 622 133 HOH HOH . C 3 HOH A 23 623 83 HOH HOH . C 3 HOH A 24 624 97 HOH HOH . C 3 HOH A 25 625 76 HOH HOH . C 3 HOH A 26 626 113 HOH HOH . C 3 HOH A 27 627 22 HOH HOH . C 3 HOH A 28 628 102 HOH HOH . C 3 HOH A 29 629 237 HOH HOH . C 3 HOH A 30 630 80 HOH HOH . C 3 HOH A 31 631 14 HOH HOH . C 3 HOH A 32 632 123 HOH HOH . C 3 HOH A 33 633 28 HOH HOH . C 3 HOH A 34 634 91 HOH HOH . C 3 HOH A 35 635 18 HOH HOH . C 3 HOH A 36 636 57 HOH HOH . C 3 HOH A 37 637 120 HOH HOH . C 3 HOH A 38 638 52 HOH HOH . C 3 HOH A 39 639 63 HOH HOH . C 3 HOH A 40 640 21 HOH HOH . C 3 HOH A 41 641 47 HOH HOH . C 3 HOH A 42 642 9 HOH HOH . C 3 HOH A 43 643 38 HOH HOH . C 3 HOH A 44 644 242 HOH HOH . C 3 HOH A 45 645 243 HOH HOH . C 3 HOH A 46 646 23 HOH HOH . C 3 HOH A 47 647 2 HOH HOH . C 3 HOH A 48 648 219 HOH HOH . C 3 HOH A 49 649 49 HOH HOH . C 3 HOH A 50 650 27 HOH HOH . C 3 HOH A 51 651 50 HOH HOH . C 3 HOH A 52 652 118 HOH HOH . C 3 HOH A 53 653 101 HOH HOH . C 3 HOH A 54 654 209 HOH HOH . C 3 HOH A 55 655 43 HOH HOH . C 3 HOH A 56 656 79 HOH HOH . C 3 HOH A 57 657 149 HOH HOH . C 3 HOH A 58 658 134 HOH HOH . C 3 HOH A 59 659 36 HOH HOH . C 3 HOH A 60 660 193 HOH HOH . C 3 HOH A 61 661 247 HOH HOH . C 3 HOH A 62 662 8 HOH HOH . C 3 HOH A 63 663 127 HOH HOH . C 3 HOH A 64 664 16 HOH HOH . C 3 HOH A 65 665 82 HOH HOH . C 3 HOH A 66 666 45 HOH HOH . C 3 HOH A 67 667 235 HOH HOH . C 3 HOH A 68 668 128 HOH HOH . C 3 HOH A 69 669 69 HOH HOH . C 3 HOH A 70 670 77 HOH HOH . C 3 HOH A 71 671 31 HOH HOH . C 3 HOH A 72 672 214 HOH HOH . C 3 HOH A 73 673 184 HOH HOH . C 3 HOH A 74 674 1 HOH HOH . C 3 HOH A 75 675 253 HOH HOH . C 3 HOH A 76 676 142 HOH HOH . C 3 HOH A 77 677 130 HOH HOH . C 3 HOH A 78 678 100 HOH HOH . C 3 HOH A 79 679 183 HOH HOH . C 3 HOH A 80 680 3 HOH HOH . C 3 HOH A 81 681 187 HOH HOH . C 3 HOH A 82 682 59 HOH HOH . C 3 HOH A 83 683 35 HOH HOH . C 3 HOH A 84 684 33 HOH HOH . C 3 HOH A 85 685 164 HOH HOH . C 3 HOH A 86 686 19 HOH HOH . C 3 HOH A 87 687 233 HOH HOH . C 3 HOH A 88 688 10 HOH HOH . C 3 HOH A 89 689 168 HOH HOH . C 3 HOH A 90 690 211 HOH HOH . C 3 HOH A 91 691 84 HOH HOH . C 3 HOH A 92 692 196 HOH HOH . C 3 HOH A 93 693 56 HOH HOH . C 3 HOH A 94 694 165 HOH HOH . C 3 HOH A 95 695 160 HOH HOH . C 3 HOH A 96 696 37 HOH HOH . C 3 HOH A 97 697 40 HOH HOH . C 3 HOH A 98 698 34 HOH HOH . C 3 HOH A 99 699 103 HOH HOH . C 3 HOH A 100 700 244 HOH HOH . C 3 HOH A 101 701 143 HOH HOH . C 3 HOH A 102 702 65 HOH HOH . C 3 HOH A 103 703 64 HOH HOH . C 3 HOH A 104 704 62 HOH HOH . C 3 HOH A 105 705 54 HOH HOH . C 3 HOH A 106 706 53 HOH HOH . C 3 HOH A 107 707 15 HOH HOH . C 3 HOH A 108 708 78 HOH HOH . C 3 HOH A 109 709 12 HOH HOH . C 3 HOH A 110 710 55 HOH HOH . C 3 HOH A 111 711 167 HOH HOH . C 3 HOH A 112 712 41 HOH HOH . C 3 HOH A 113 713 198 HOH HOH . C 3 HOH A 114 714 75 HOH HOH . C 3 HOH A 115 715 194 HOH HOH . C 3 HOH A 116 716 212 HOH HOH . C 3 HOH A 117 717 92 HOH HOH . C 3 HOH A 118 718 71 HOH HOH . C 3 HOH A 119 719 74 HOH HOH . C 3 HOH A 120 720 139 HOH HOH . C 3 HOH A 121 721 68 HOH HOH . C 3 HOH A 122 722 148 HOH HOH . C 3 HOH A 123 723 119 HOH HOH . C 3 HOH A 124 724 5 HOH HOH . C 3 HOH A 125 725 204 HOH HOH . C 3 HOH A 126 726 124 HOH HOH . C 3 HOH A 127 727 169 HOH HOH . C 3 HOH A 128 728 108 HOH HOH . C 3 HOH A 129 729 25 HOH HOH . C 3 HOH A 130 730 131 HOH HOH . C 3 HOH A 131 731 6 HOH HOH . C 3 HOH A 132 732 224 HOH HOH . C 3 HOH A 133 733 186 HOH HOH . C 3 HOH A 134 734 44 HOH HOH . C 3 HOH A 135 735 115 HOH HOH . C 3 HOH A 136 736 227 HOH HOH . C 3 HOH A 137 737 110 HOH HOH . C 3 HOH A 138 738 256 HOH HOH . C 3 HOH A 139 739 236 HOH HOH . C 3 HOH A 140 740 4 HOH HOH . C 3 HOH A 141 741 86 HOH HOH . C 3 HOH A 142 742 125 HOH HOH . C 3 HOH A 143 743 205 HOH HOH . C 3 HOH A 144 744 155 HOH HOH . C 3 HOH A 145 745 112 HOH HOH . C 3 HOH A 146 746 29 HOH HOH . C 3 HOH A 147 747 72 HOH HOH . C 3 HOH A 148 748 136 HOH HOH . C 3 HOH A 149 749 88 HOH HOH . C 3 HOH A 150 750 90 HOH HOH . C 3 HOH A 151 751 166 HOH HOH . C 3 HOH A 152 752 32 HOH HOH . C 3 HOH A 153 753 153 HOH HOH . C 3 HOH A 154 754 221 HOH HOH . C 3 HOH A 155 755 195 HOH HOH . C 3 HOH A 156 756 30 HOH HOH . C 3 HOH A 157 757 99 HOH HOH . C 3 HOH A 158 758 73 HOH HOH . C 3 HOH A 159 759 245 HOH HOH . C 3 HOH A 160 760 175 HOH HOH . C 3 HOH A 161 761 172 HOH HOH . C 3 HOH A 162 762 122 HOH HOH . C 3 HOH A 163 763 176 HOH HOH . C 3 HOH A 164 764 251 HOH HOH . C 3 HOH A 165 765 250 HOH HOH . C 3 HOH A 166 766 81 HOH HOH . C 3 HOH A 167 767 46 HOH HOH . C 3 HOH A 168 768 238 HOH HOH . C 3 HOH A 169 769 239 HOH HOH . C 3 HOH A 170 770 89 HOH HOH . C 3 HOH A 171 771 146 HOH HOH . C 3 HOH A 172 772 206 HOH HOH . C 3 HOH A 173 773 249 HOH HOH . C 3 HOH A 174 774 51 HOH HOH . C 3 HOH A 175 775 171 HOH HOH . C 3 HOH A 176 776 107 HOH HOH . C 3 HOH A 177 777 173 HOH HOH . C 3 HOH A 178 778 116 HOH HOH . C 3 HOH A 179 779 180 HOH HOH . C 3 HOH A 180 780 156 HOH HOH . C 3 HOH A 181 781 181 HOH HOH . C 3 HOH A 182 782 26 HOH HOH . C 3 HOH A 183 783 226 HOH HOH . C 3 HOH A 184 784 48 HOH HOH . C 3 HOH A 185 785 96 HOH HOH . C 3 HOH A 186 786 230 HOH HOH . C 3 HOH A 187 787 140 HOH HOH . C 3 HOH A 188 788 98 HOH HOH . C 3 HOH A 189 789 24 HOH HOH . C 3 HOH A 190 790 60 HOH HOH . C 3 HOH A 191 791 157 HOH HOH . C 3 HOH A 192 792 147 HOH HOH . C 3 HOH A 193 793 138 HOH HOH . C 3 HOH A 194 794 105 HOH HOH . C 3 HOH A 195 795 159 HOH HOH . C 3 HOH A 196 796 218 HOH HOH . C 3 HOH A 197 797 67 HOH HOH . C 3 HOH A 198 798 162 HOH HOH . C 3 HOH A 199 799 231 HOH HOH . C 3 HOH A 200 800 66 HOH HOH . C 3 HOH A 201 801 229 HOH HOH . C 3 HOH A 202 802 170 HOH HOH . C 3 HOH A 203 803 208 HOH HOH . C 3 HOH A 204 804 135 HOH HOH . C 3 HOH A 205 805 174 HOH HOH . C 3 HOH A 206 806 223 HOH HOH . C 3 HOH A 207 807 61 HOH HOH . C 3 HOH A 208 808 259 HOH HOH . C 3 HOH A 209 809 234 HOH HOH . C 3 HOH A 210 810 11 HOH HOH . C 3 HOH A 211 811 17 HOH HOH . C 3 HOH A 212 812 7 HOH HOH . C 3 HOH A 213 813 246 HOH HOH . C 3 HOH A 214 814 203 HOH HOH . C 3 HOH A 215 815 141 HOH HOH . C 3 HOH A 216 816 254 HOH HOH . C 3 HOH A 217 817 177 HOH HOH . C 3 HOH A 218 818 257 HOH HOH . C 3 HOH A 219 819 179 HOH HOH . C 3 HOH A 220 820 145 HOH HOH . C 3 HOH A 221 821 222 HOH HOH . C 3 HOH A 222 822 248 HOH HOH . C 3 HOH A 223 823 129 HOH HOH . C 3 HOH A 224 824 185 HOH HOH . C 3 HOH A 225 825 213 HOH HOH . C 3 HOH A 226 826 217 HOH HOH . C 3 HOH A 227 827 215 HOH HOH . C 3 HOH A 228 828 42 HOH HOH . C 3 HOH A 229 829 85 HOH HOH . C 3 HOH A 230 830 106 HOH HOH . C 3 HOH A 231 831 95 HOH HOH . C 3 HOH A 232 832 216 HOH HOH . C 3 HOH A 233 833 255 HOH HOH . C 3 HOH A 234 834 114 HOH HOH . C 3 HOH A 235 835 152 HOH HOH . C 3 HOH A 236 836 220 HOH HOH . C 3 HOH A 237 837 158 HOH HOH . C 3 HOH A 238 838 151 HOH HOH . C 3 HOH A 239 839 189 HOH HOH . C 3 HOH A 240 840 137 HOH HOH . C 3 HOH A 241 841 225 HOH HOH . C 3 HOH A 242 842 117 HOH HOH . C 3 HOH A 243 843 240 HOH HOH . C 3 HOH A 244 844 150 HOH HOH . C 3 HOH A 245 845 87 HOH HOH . C 3 HOH A 246 846 190 HOH HOH . C 3 HOH A 247 847 161 HOH HOH . C 3 HOH A 248 848 258 HOH HOH . C 3 HOH A 249 849 232 HOH HOH . C 3 HOH A 250 850 104 HOH HOH . C 3 HOH A 251 851 58 HOH HOH . C 3 HOH A 252 852 178 HOH HOH . C 3 HOH A 253 853 210 HOH HOH . C 3 HOH A 254 854 201 HOH HOH . C 3 HOH A 255 855 191 HOH HOH . C 3 HOH A 256 856 163 HOH HOH . C 3 HOH A 257 857 252 HOH HOH . C 3 HOH A 258 858 228 HOH HOH . C 3 HOH A 259 859 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PHE . . . B 2 5.076 18.417 13.056 1 28.9 ? N PHE 501 A 1 HETATM 2 C CA PHE . . . B 2 4.666 18.647 11.671 1 27.06 ? CA PHE 501 A 1 HETATM 3 C C PHE . . . B 2 4.403 20.142 11.482 1 34.34 ? C PHE 501 A 1 HETATM 4 O O PHE . . . B 2 4.221 20.619 10.355 1 31.9 ? O PHE 501 A 1 HETATM 5 C CB PHE . . . B 2 3.418 17.832 11.328 1 26.18 ? CB PHE 501 A 1 HETATM 6 C CG PHE . . . B 2 3.632 16.329 11.404 1 26.78 ? CG PHE 501 A 1 HETATM 7 C CD1 PHE . . . B 2 3.298 15.608 12.555 1 26.84 ? CD1 PHE 501 A 1 HETATM 8 C CD2 PHE . . . B 2 4.2 15.663 10.347 1 24.24 ? CD2 PHE 501 A 1 HETATM 9 C CE1 PHE . . . B 2 3.508 14.214 12.623 1 25.88 ? CE1 PHE 501 A 1 HETATM 10 C CE2 PHE . . . B 2 4.418 14.274 10.403 1 26.73 ? CE2 PHE 501 A 1 HETATM 11 C CZ PHE . . . B 2 4.057 13.555 11.551 1 25.15 ? CZ PHE 501 A 1 HETATM 12 O OXT PHE . . . B 2 4.369 20.869 12.477 1 30.88 ? OXT PHE 501 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #