data_5MGJ # _model_server_result.job_id vx5cjeK6sVIsYlRDTBvnQA _model_server_result.datetime_utc '2024-11-22 23:07:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mgj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1901}' # _entry.id 5MGJ # _exptl.entry_id 5MGJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 215.634 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 4-chloranyl-1-methyl-6-oxidanylidene-pyridine-3-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5MGJ _cell.length_a 95.737 _cell.length_b 95.737 _cell.length_c 32.96 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MGJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H10 Cl N O3' _chem_comp.formula_weight 215.634 _chem_comp.id 7MX _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 4-chloranyl-1-methyl-6-oxidanylidene-pyridine-3-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C13 7MX sing 1 n n C12 C13 7MX doub 2 n n C12 C10 7MX sing 3 n n C13 C06 7MX sing 4 n n O11 C10 7MX doub 5 n n C10 N08 7MX sing 6 n n O05 C04 7MX doub 7 n n C06 C04 7MX sing 8 n n C06 C07 7MX doub 9 n n C04 O03 7MX sing 10 n n N08 C07 7MX sing 11 n n N08 C09 7MX sing 12 n n C02 O03 7MX sing 13 n n C02 C01 7MX sing 14 n n C01 H1 7MX sing 15 n n C01 H2 7MX sing 16 n n C01 H3 7MX sing 17 n n C02 H4 7MX sing 18 n n C02 H5 7MX sing 19 n n C07 H6 7MX sing 20 n n C09 H7 7MX sing 21 n n C09 H8 7MX sing 22 n n C09 H9 7MX sing 23 n n C12 H10 7MX sing 24 n n # _atom_sites.entry_id 5MGJ _atom_sites.fract_transf_matrix[1][1] 0.010445 _atom_sites.fract_transf_matrix[1][2] 0.006031 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012061 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.03034 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7MX A 1 1901 1 7MX 2A2 . C 3 HOH A 1 2001 16 HOH HOH . C 3 HOH A 2 2002 81 HOH HOH . C 3 HOH A 3 2003 73 HOH HOH . C 3 HOH A 4 2004 43 HOH HOH . C 3 HOH A 5 2005 78 HOH HOH . C 3 HOH A 6 2006 7 HOH HOH . C 3 HOH A 7 2007 23 HOH HOH . C 3 HOH A 8 2008 22 HOH HOH . C 3 HOH A 9 2009 104 HOH HOH . C 3 HOH A 10 2010 10 HOH HOH . C 3 HOH A 11 2011 110 HOH HOH . C 3 HOH A 12 2012 19 HOH HOH . C 3 HOH A 13 2013 4 HOH HOH . C 3 HOH A 14 2014 34 HOH HOH . C 3 HOH A 15 2015 106 HOH HOH . C 3 HOH A 16 2016 35 HOH HOH . C 3 HOH A 17 2017 101 HOH HOH . C 3 HOH A 18 2018 49 HOH HOH . C 3 HOH A 19 2019 37 HOH HOH . C 3 HOH A 20 2020 59 HOH HOH . C 3 HOH A 21 2021 5 HOH HOH . C 3 HOH A 22 2022 15 HOH HOH . C 3 HOH A 23 2023 63 HOH HOH . C 3 HOH A 24 2024 31 HOH HOH . C 3 HOH A 25 2025 26 HOH HOH . C 3 HOH A 26 2026 12 HOH HOH . C 3 HOH A 27 2027 20 HOH HOH . C 3 HOH A 28 2028 21 HOH HOH . C 3 HOH A 29 2029 74 HOH HOH . C 3 HOH A 30 2030 3 HOH HOH . C 3 HOH A 31 2031 58 HOH HOH . C 3 HOH A 32 2032 103 HOH HOH . C 3 HOH A 33 2033 55 HOH HOH . C 3 HOH A 34 2034 18 HOH HOH . C 3 HOH A 35 2035 1 HOH HOH . C 3 HOH A 36 2036 92 HOH HOH . C 3 HOH A 37 2037 117 HOH HOH . C 3 HOH A 38 2038 11 HOH HOH . C 3 HOH A 39 2039 30 HOH HOH . C 3 HOH A 40 2040 14 HOH HOH . C 3 HOH A 41 2041 99 HOH HOH . C 3 HOH A 42 2042 13 HOH HOH . C 3 HOH A 43 2043 86 HOH HOH . C 3 HOH A 44 2044 51 HOH HOH . C 3 HOH A 45 2045 48 HOH HOH . C 3 HOH A 46 2046 2 HOH HOH . C 3 HOH A 47 2047 17 HOH HOH . C 3 HOH A 48 2048 9 HOH HOH . C 3 HOH A 49 2049 127 HOH HOH . C 3 HOH A 50 2050 57 HOH HOH . C 3 HOH A 51 2051 69 HOH HOH . C 3 HOH A 52 2052 33 HOH HOH . C 3 HOH A 53 2053 76 HOH HOH . C 3 HOH A 54 2054 124 HOH HOH . C 3 HOH A 55 2055 27 HOH HOH . C 3 HOH A 56 2056 44 HOH HOH . C 3 HOH A 57 2057 71 HOH HOH . C 3 HOH A 58 2058 24 HOH HOH . C 3 HOH A 59 2059 39 HOH HOH . C 3 HOH A 60 2060 38 HOH HOH . C 3 HOH A 61 2061 61 HOH HOH . C 3 HOH A 62 2062 102 HOH HOH . C 3 HOH A 63 2063 107 HOH HOH . C 3 HOH A 64 2064 105 HOH HOH . C 3 HOH A 65 2065 6 HOH HOH . C 3 HOH A 66 2066 36 HOH HOH . C 3 HOH A 67 2067 25 HOH HOH . C 3 HOH A 68 2068 88 HOH HOH . C 3 HOH A 69 2069 96 HOH HOH . C 3 HOH A 70 2070 70 HOH HOH . C 3 HOH A 71 2071 8 HOH HOH . C 3 HOH A 72 2072 111 HOH HOH . C 3 HOH A 73 2073 116 HOH HOH . C 3 HOH A 74 2074 32 HOH HOH . C 3 HOH A 75 2075 91 HOH HOH . C 3 HOH A 76 2076 79 HOH HOH . C 3 HOH A 77 2077 42 HOH HOH . C 3 HOH A 78 2078 67 HOH HOH . C 3 HOH A 79 2079 72 HOH HOH . C 3 HOH A 80 2080 28 HOH HOH . C 3 HOH A 81 2081 45 HOH HOH . C 3 HOH A 82 2082 56 HOH HOH . C 3 HOH A 83 2083 29 HOH HOH . C 3 HOH A 84 2084 41 HOH HOH . C 3 HOH A 85 2085 46 HOH HOH . C 3 HOH A 86 2086 60 HOH HOH . C 3 HOH A 87 2087 68 HOH HOH . C 3 HOH A 88 2088 54 HOH HOH . C 3 HOH A 89 2089 89 HOH HOH . C 3 HOH A 90 2090 47 HOH HOH . C 3 HOH A 91 2091 108 HOH HOH . C 3 HOH A 92 2092 120 HOH HOH . C 3 HOH A 93 2093 50 HOH HOH . C 3 HOH A 94 2094 80 HOH HOH . C 3 HOH A 95 2095 123 HOH HOH . C 3 HOH A 96 2096 109 HOH HOH . C 3 HOH A 97 2097 128 HOH HOH . C 3 HOH A 98 2098 94 HOH HOH . C 3 HOH A 99 2099 85 HOH HOH . C 3 HOH A 100 2100 83 HOH HOH . C 3 HOH A 101 2101 119 HOH HOH . C 3 HOH A 102 2102 113 HOH HOH . C 3 HOH A 103 2103 53 HOH HOH . C 3 HOH A 104 2104 84 HOH HOH . C 3 HOH A 105 2105 129 HOH HOH . C 3 HOH A 106 2106 121 HOH HOH . C 3 HOH A 107 2107 65 HOH HOH . C 3 HOH A 108 2108 64 HOH HOH . C 3 HOH A 109 2109 93 HOH HOH . C 3 HOH A 110 2110 77 HOH HOH . C 3 HOH A 111 2111 66 HOH HOH . C 3 HOH A 112 2112 97 HOH HOH . C 3 HOH A 113 2113 118 HOH HOH . C 3 HOH A 114 2114 114 HOH HOH . C 3 HOH A 115 2115 95 HOH HOH . C 3 HOH A 116 2116 75 HOH HOH . C 3 HOH A 117 2117 112 HOH HOH . C 3 HOH A 118 2118 122 HOH HOH . C 3 HOH A 119 2119 126 HOH HOH . C 3 HOH A 120 2120 98 HOH HOH . C 3 HOH A 121 2121 52 HOH HOH . C 3 HOH A 122 2122 125 HOH HOH . C 3 HOH A 123 2123 82 HOH HOH . C 3 HOH A 124 2124 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 7MX . . . B 2 40.826 -38.685 30.31 1 20.77 ? C01 7MX 1901 A 1 HETATM 2 C C02 7MX . . . B 2 40.242 -39.755 29.431 1 26.48 ? C02 7MX 1901 A 1 HETATM 3 O O03 7MX . . . B 2 38.855 -39.782 29.67 1 33.34 ? O03 7MX 1901 A 1 HETATM 4 C C04 7MX . . . B 2 38.154 -40.631 28.813 1 30.16 ? C04 7MX 1901 A 1 HETATM 5 O O05 7MX . . . B 2 38.774 -41.513 28.269 1 33.41 ? O05 7MX 1901 A 1 HETATM 6 C C06 7MX . . . B 2 36.666 -40.415 28.58 1 23.62 ? C06 7MX 1901 A 1 HETATM 7 C C07 7MX . . . B 2 36.061 -39.129 29.078 1 21.13 ? C07 7MX 1901 A 1 HETATM 8 N N08 7MX . . . B 2 34.64 -38.861 28.878 1 22.95 ? N08 7MX 1901 A 1 HETATM 9 C C09 7MX . . . B 2 34.09 -37.644 29.352 1 16.83 ? C09 7MX 1901 A 1 HETATM 10 C C10 7MX . . . B 2 33.788 -39.827 28.184 1 20.86 ? C10 7MX 1901 A 1 HETATM 11 O O11 7MX . . . B 2 32.61 -39.588 28.022 1 24 ? O11 7MX 1901 A 1 HETATM 12 C C12 7MX . . . B 2 34.378 -41.117 27.677 1 13.33 ? C12 7MX 1901 A 1 HETATM 13 C C13 7MX . . . B 2 35.815 -41.4 27.876 1 23.74 ? C13 7MX 1901 A 1 HETATM 14 CL CL 7MX . . . B 2 36.472 -42.906 27.279 1 99.12 ? CL 7MX 1901 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #