data_5MHG # _model_server_result.job_id IykuCV-K9SYzVu03diw-kA _model_server_result.datetime_utc '2024-10-20 20:23:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5MHG # _exptl.entry_id 5MHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 731.872 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRAIODOBISPHENOLA _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.39 _cell.angle_gamma 90 _cell.entry_id 5MHG _cell.length_a 131.767 _cell.length_b 56.992 _cell.length_c 61.993 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 133 L CYS 133 1_555 A SG CYS 193 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 151 H CYS 151 1_555 B SG CYS 206 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C15 H12 I4 O2' _chem_comp.formula_weight 731.872 _chem_comp.id 4IB _chem_comp.mon_nstd_flag . _chem_comp.name TETRAIODOBISPHENOLA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C11 4IB sing 1 n n I1 C14 4IB sing 2 n n C11 C14 4IB doub 3 n y C11 C15 4IB sing 4 n y C14 C13 4IB sing 5 n y I2 C15 4IB sing 6 n n C15 C12 4IB doub 7 n y C13 C10 4IB doub 8 n y C12 C10 4IB sing 9 n y C10 C7 4IB sing 10 n n C7 C8 4IB sing 11 n n C7 C9 4IB sing 12 n n C7 C3 4IB sing 13 n n I4 C4 4IB sing 14 n n C1 C3 4IB doub 15 n y C1 C4 4IB sing 16 n y C3 C6 4IB sing 17 n y C4 C5 4IB doub 18 n y C6 C2 4IB doub 19 n y C5 C2 4IB sing 20 n y C5 O2 4IB sing 21 n n C2 I3 4IB sing 22 n n C1 H2 4IB sing 23 n n C6 H1 4IB sing 24 n n C8 H5 4IB sing 25 n n C8 H4 4IB sing 26 n n C8 H3 4IB sing 27 n n C9 H7 4IB sing 28 n n C9 H8 4IB sing 29 n n C9 H6 4IB sing 30 n n C12 H11 4IB sing 31 n n C13 H9 4IB sing 32 n n O1 H10 4IB sing 33 n n O2 H12 4IB sing 34 n n # _atom_sites.entry_id 5MHG _atom_sites.fract_transf_matrix[1][1] 0.007589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001119 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 L 1 301 1 SO4 SO4 . D 4 4IB H 1 301 1 4IB 4IB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4IB . . . D 4 12.659 -13.92 45.471 1 75.83 ? C1 4IB 301 H 1 HETATM 2 C C2 4IB . . . D 4 11.621 -14.444 48.002 1 83.39 ? C2 4IB 301 H 1 HETATM 3 C C3 4IB . . . D 4 12.751 -15.234 45.98 1 64.46 ? C3 4IB 301 H 1 HETATM 4 C C4 4IB . . . D 4 12.056 -12.895 46.211 1 81.11 ? C4 4IB 301 H 1 HETATM 5 C C5 4IB . . . D 4 11.535 -13.153 47.48 1 80.64 ? C5 4IB 301 H 1 HETATM 6 C C6 4IB . . . D 4 12.222 -15.471 47.26 1 74.16 ? C6 4IB 301 H 1 HETATM 7 C C7 4IB . . . D 4 13.425 -16.349 45.143 1 61.94 ? C7 4IB 301 H 1 HETATM 8 C C8 4IB . . . D 4 14.951 -16.171 45.355 1 65.16 ? C8 4IB 301 H 1 HETATM 9 C C9 4IB . . . D 4 13.105 -17.783 45.642 1 72.75 ? C9 4IB 301 H 1 HETATM 10 C C10 4IB . . . D 4 12.994 -16.304 43.655 1 72.12 ? C10 4IB 301 H 1 HETATM 11 C C11 4IB . . . D 4 12.141 -16.227 40.948 1 71.7 ? C11 4IB 301 H 1 HETATM 12 C C12 4IB . . . D 4 11.625 -16.222 43.317 1 68.58 ? C12 4IB 301 H 1 HETATM 13 C C13 4IB . . . D 4 13.921 -16.35 42.598 1 80.87 ? C13 4IB 301 H 1 HETATM 14 C C14 4IB . . . D 4 13.5 -16.312 41.262 1 78.01 ? C14 4IB 301 H 1 HETATM 15 C C15 4IB . . . D 4 11.205 -16.182 41.981 1 71.29 ? C15 4IB 301 H 1 HETATM 16 O O1 4IB . . . D 4 11.716 -16.188 39.648 1 78.62 ? O1 4IB 301 H 1 HETATM 17 O O2 4IB . . . D 4 10.944 -12.163 48.219 1 74.18 ? O2 4IB 301 H 1 HETATM 18 I I1 4IB . . . D 4 14.955 -16.384 39.758 1 148.52 ? I1 4IB 301 H 1 HETATM 19 I I2 4IB . . . D 4 9.154 -16.055 41.59 1 81.23 ? I2 4IB 301 H 1 HETATM 20 I I3 4IB . . . D 4 10.867 -14.923 49.897 1 97.58 ? I3 4IB 301 H 1 HETATM 21 I I4 4IB . . . D 4 11.958 -10.979 45.376 1 84.51 ? I4 4IB 301 H 1 HETATM 22 H H2 4IB . . . D 4 13.059 -13.701 44.482 1 91 ? H2 4IB 301 H 1 HETATM 23 H H1 4IB . . . D 4 12.271 -16.464 47.7 1 88.99 ? H1 4IB 301 H 1 HETATM 24 H H5 4IB . . . D 4 15.523 -16.976 44.877 1 78.2 ? H5 4IB 301 H 1 HETATM 25 H H4 4IB . . . D 4 15.205 -16.187 46.423 1 78.2 ? H4 4IB 301 H 1 HETATM 26 H H3 4IB . . . D 4 15.32 -15.221 44.953 1 78.2 ? H3 4IB 301 H 1 HETATM 27 H H7 4IB . . . D 4 13.587 -18.538 45.009 1 87.3 ? H7 4IB 301 H 1 HETATM 28 H H8 4IB . . . D 4 12.029 -17.996 45.636 1 87.3 ? H8 4IB 301 H 1 HETATM 29 H H6 4IB . . . D 4 13.466 -17.945 46.665 1 87.3 ? H6 4IB 301 H 1 HETATM 30 H H11 4IB . . . D 4 10.879 -16.184 44.111 1 82.3 ? H11 4IB 301 H 1 HETATM 31 H H9 4IB . . . D 4 14.987 -16.417 42.803 1 97.04 ? H9 4IB 301 H 1 HETATM 32 H H10 4IB . . . D 4 11.934 -15.311 39.285 1 94.34 ? H10 4IB 301 H 1 HETATM 33 H H12 4IB . . . D 4 11.641 -11.714 48.731 1 89.02 ? H12 4IB 301 H 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #