data_5MIQ # _model_server_result.job_id C-axMxByZzZvgYLWBEtpKQ _model_server_result.datetime_utc '2024-11-23 00:58:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5miq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5MIQ # _exptl.entry_id 5MIQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MIQ _cell.length_a 121.46 _cell.length_b 121.46 _cell.length_c 60.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 30.355 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 153 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 134 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 156 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 137 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.108 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 408 n n C1 C2 PEG sing 409 n n C1 H11 PEG sing 410 n n C1 H12 PEG sing 411 n n O1 HO1 PEG sing 412 n n C2 O2 PEG sing 413 n n C2 H21 PEG sing 414 n n C2 H22 PEG sing 415 n n O2 C3 PEG sing 416 n n C3 C4 PEG sing 417 n n C3 H31 PEG sing 418 n n C3 H32 PEG sing 419 n n C4 O4 PEG sing 420 n n C4 H41 PEG sing 421 n n C4 H42 PEG sing 422 n n O4 HO4 PEG sing 423 n n # _atom_sites.entry_id 5MIQ _atom_sites.fract_transf_matrix[1][1] 0.008233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016472 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 401 1 FAD FAD . C 3 NAP A 1 402 1 NAP NAP . D 4 PEG A 1 403 1 PEG PEG . E 4 PEG A 1 404 2 PEG PEG . F 5 SO4 A 1 405 1 SO4 SO4 . G 5 SO4 A 1 406 2 SO4 SO4 . H 6 HOH A 1 501 227 HOH HOH . H 6 HOH A 2 502 186 HOH HOH . H 6 HOH A 3 503 155 HOH HOH . H 6 HOH A 4 504 86 HOH HOH . H 6 HOH A 5 505 200 HOH HOH . H 6 HOH A 6 506 82 HOH HOH . H 6 HOH A 7 507 211 HOH HOH . H 6 HOH A 8 508 78 HOH HOH . H 6 HOH A 9 509 154 HOH HOH . H 6 HOH A 10 510 65 HOH HOH . H 6 HOH A 11 511 99 HOH HOH . H 6 HOH A 12 512 118 HOH HOH . H 6 HOH A 13 513 158 HOH HOH . H 6 HOH A 14 514 66 HOH HOH . H 6 HOH A 15 515 127 HOH HOH . H 6 HOH A 16 516 204 HOH HOH . H 6 HOH A 17 517 97 HOH HOH . H 6 HOH A 18 518 71 HOH HOH . H 6 HOH A 19 519 39 HOH HOH . H 6 HOH A 20 520 106 HOH HOH . H 6 HOH A 21 521 167 HOH HOH . H 6 HOH A 22 522 59 HOH HOH . H 6 HOH A 23 523 83 HOH HOH . H 6 HOH A 24 524 232 HOH HOH . H 6 HOH A 25 525 110 HOH HOH . H 6 HOH A 26 526 197 HOH HOH . H 6 HOH A 27 527 37 HOH HOH . H 6 HOH A 28 528 75 HOH HOH . H 6 HOH A 29 529 164 HOH HOH . H 6 HOH A 30 530 18 HOH HOH . H 6 HOH A 31 531 1 HOH HOH . H 6 HOH A 32 532 27 HOH HOH . H 6 HOH A 33 533 85 HOH HOH . H 6 HOH A 34 534 79 HOH HOH . H 6 HOH A 35 535 23 HOH HOH . H 6 HOH A 36 536 80 HOH HOH . H 6 HOH A 37 537 183 HOH HOH . H 6 HOH A 38 538 91 HOH HOH . H 6 HOH A 39 539 198 HOH HOH . H 6 HOH A 40 540 156 HOH HOH . H 6 HOH A 41 541 120 HOH HOH . H 6 HOH A 42 542 165 HOH HOH . H 6 HOH A 43 543 5 HOH HOH . H 6 HOH A 44 544 12 HOH HOH . H 6 HOH A 45 545 160 HOH HOH . H 6 HOH A 46 546 119 HOH HOH . H 6 HOH A 47 547 117 HOH HOH . H 6 HOH A 48 548 89 HOH HOH . H 6 HOH A 49 549 126 HOH HOH . H 6 HOH A 50 550 178 HOH HOH . H 6 HOH A 51 551 142 HOH HOH . H 6 HOH A 52 552 144 HOH HOH . H 6 HOH A 53 553 6 HOH HOH . H 6 HOH A 54 554 8 HOH HOH . H 6 HOH A 55 555 2 HOH HOH . H 6 HOH A 56 556 98 HOH HOH . H 6 HOH A 57 557 104 HOH HOH . H 6 HOH A 58 558 95 HOH HOH . H 6 HOH A 59 559 209 HOH HOH . H 6 HOH A 60 560 44 HOH HOH . H 6 HOH A 61 561 36 HOH HOH . H 6 HOH A 62 562 15 HOH HOH . H 6 HOH A 63 563 41 HOH HOH . H 6 HOH A 64 564 20 HOH HOH . H 6 HOH A 65 565 19 HOH HOH . H 6 HOH A 66 566 187 HOH HOH . H 6 HOH A 67 567 162 HOH HOH . H 6 HOH A 68 568 173 HOH HOH . H 6 HOH A 69 569 21 HOH HOH . H 6 HOH A 70 570 33 HOH HOH . H 6 HOH A 71 571 49 HOH HOH . H 6 HOH A 72 572 223 HOH HOH . H 6 HOH A 73 573 116 HOH HOH . H 6 HOH A 74 574 14 HOH HOH . H 6 HOH A 75 575 76 HOH HOH . H 6 HOH A 76 576 195 HOH HOH . H 6 HOH A 77 577 61 HOH HOH . H 6 HOH A 78 578 174 HOH HOH . H 6 HOH A 79 579 72 HOH HOH . H 6 HOH A 80 580 62 HOH HOH . H 6 HOH A 81 581 121 HOH HOH . H 6 HOH A 82 582 157 HOH HOH . H 6 HOH A 83 583 3 HOH HOH . H 6 HOH A 84 584 188 HOH HOH . H 6 HOH A 85 585 55 HOH HOH . H 6 HOH A 86 586 50 HOH HOH . H 6 HOH A 87 587 150 HOH HOH . H 6 HOH A 88 588 181 HOH HOH . H 6 HOH A 89 589 215 HOH HOH . H 6 HOH A 90 590 90 HOH HOH . H 6 HOH A 91 591 25 HOH HOH . H 6 HOH A 92 592 81 HOH HOH . H 6 HOH A 93 593 63 HOH HOH . H 6 HOH A 94 594 233 HOH HOH . H 6 HOH A 95 595 38 HOH HOH . H 6 HOH A 96 596 214 HOH HOH . H 6 HOH A 97 597 168 HOH HOH . H 6 HOH A 98 598 7 HOH HOH . H 6 HOH A 99 599 113 HOH HOH . H 6 HOH A 100 600 199 HOH HOH . H 6 HOH A 101 601 147 HOH HOH . H 6 HOH A 102 602 51 HOH HOH . H 6 HOH A 103 603 35 HOH HOH . H 6 HOH A 104 604 205 HOH HOH . H 6 HOH A 105 605 92 HOH HOH . H 6 HOH A 106 606 153 HOH HOH . H 6 HOH A 107 607 131 HOH HOH . H 6 HOH A 108 608 123 HOH HOH . H 6 HOH A 109 609 226 HOH HOH . H 6 HOH A 110 610 58 HOH HOH . H 6 HOH A 111 611 28 HOH HOH . H 6 HOH A 112 612 48 HOH HOH . H 6 HOH A 113 613 29 HOH HOH . H 6 HOH A 114 614 84 HOH HOH . H 6 HOH A 115 615 100 HOH HOH . H 6 HOH A 116 616 94 HOH HOH . H 6 HOH A 117 617 11 HOH HOH . H 6 HOH A 118 618 145 HOH HOH . H 6 HOH A 119 619 109 HOH HOH . H 6 HOH A 120 620 16 HOH HOH . H 6 HOH A 121 621 32 HOH HOH . H 6 HOH A 122 622 179 HOH HOH . H 6 HOH A 123 623 54 HOH HOH . H 6 HOH A 124 624 230 HOH HOH . H 6 HOH A 125 625 103 HOH HOH . H 6 HOH A 126 626 115 HOH HOH . H 6 HOH A 127 627 140 HOH HOH . H 6 HOH A 128 628 180 HOH HOH . H 6 HOH A 129 629 42 HOH HOH . H 6 HOH A 130 630 151 HOH HOH . H 6 HOH A 131 631 22 HOH HOH . H 6 HOH A 132 632 24 HOH HOH . H 6 HOH A 133 633 132 HOH HOH . H 6 HOH A 134 634 112 HOH HOH . H 6 HOH A 135 635 77 HOH HOH . H 6 HOH A 136 636 128 HOH HOH . H 6 HOH A 137 637 87 HOH HOH . H 6 HOH A 138 638 171 HOH HOH . H 6 HOH A 139 639 69 HOH HOH . H 6 HOH A 140 640 101 HOH HOH . H 6 HOH A 141 641 235 HOH HOH . H 6 HOH A 142 642 122 HOH HOH . H 6 HOH A 143 643 217 HOH HOH . H 6 HOH A 144 644 93 HOH HOH . H 6 HOH A 145 645 31 HOH HOH . H 6 HOH A 146 646 67 HOH HOH . H 6 HOH A 147 647 9 HOH HOH . H 6 HOH A 148 648 108 HOH HOH . H 6 HOH A 149 649 73 HOH HOH . H 6 HOH A 150 650 47 HOH HOH . H 6 HOH A 151 651 191 HOH HOH . H 6 HOH A 152 652 74 HOH HOH . H 6 HOH A 153 653 163 HOH HOH . H 6 HOH A 154 654 45 HOH HOH . H 6 HOH A 155 655 146 HOH HOH . H 6 HOH A 156 656 212 HOH HOH . H 6 HOH A 157 657 185 HOH HOH . H 6 HOH A 158 658 40 HOH HOH . H 6 HOH A 159 659 169 HOH HOH . H 6 HOH A 160 660 192 HOH HOH . H 6 HOH A 161 661 34 HOH HOH . H 6 HOH A 162 662 138 HOH HOH . H 6 HOH A 163 663 68 HOH HOH . H 6 HOH A 164 664 234 HOH HOH . H 6 HOH A 165 665 13 HOH HOH . H 6 HOH A 166 666 88 HOH HOH . H 6 HOH A 167 667 4 HOH HOH . H 6 HOH A 168 668 102 HOH HOH . H 6 HOH A 169 669 159 HOH HOH . H 6 HOH A 170 670 30 HOH HOH . H 6 HOH A 171 671 136 HOH HOH . H 6 HOH A 172 672 26 HOH HOH . H 6 HOH A 173 673 17 HOH HOH . H 6 HOH A 174 674 194 HOH HOH . H 6 HOH A 175 675 222 HOH HOH . H 6 HOH A 176 676 229 HOH HOH . H 6 HOH A 177 677 221 HOH HOH . H 6 HOH A 178 678 107 HOH HOH . H 6 HOH A 179 679 114 HOH HOH . H 6 HOH A 180 680 124 HOH HOH . H 6 HOH A 181 681 10 HOH HOH . H 6 HOH A 182 682 206 HOH HOH . H 6 HOH A 183 683 190 HOH HOH . H 6 HOH A 184 684 105 HOH HOH . H 6 HOH A 185 685 60 HOH HOH . H 6 HOH A 186 686 228 HOH HOH . H 6 HOH A 187 687 125 HOH HOH . H 6 HOH A 188 688 216 HOH HOH . H 6 HOH A 189 689 111 HOH HOH . H 6 HOH A 190 690 220 HOH HOH . H 6 HOH A 191 691 141 HOH HOH . H 6 HOH A 192 692 189 HOH HOH . H 6 HOH A 193 693 224 HOH HOH . H 6 HOH A 194 694 52 HOH HOH . H 6 HOH A 195 695 210 HOH HOH . H 6 HOH A 196 696 166 HOH HOH . H 6 HOH A 197 697 130 HOH HOH . H 6 HOH A 198 698 172 HOH HOH . H 6 HOH A 199 699 236 HOH HOH . H 6 HOH A 200 700 175 HOH HOH . H 6 HOH A 201 701 96 HOH HOH . H 6 HOH A 202 702 149 HOH HOH . H 6 HOH A 203 703 129 HOH HOH . H 6 HOH A 204 704 184 HOH HOH . H 6 HOH A 205 705 201 HOH HOH . H 6 HOH A 206 706 64 HOH HOH . H 6 HOH A 207 707 43 HOH HOH . H 6 HOH A 208 708 53 HOH HOH . H 6 HOH A 209 709 237 HOH HOH . H 6 HOH A 210 710 225 HOH HOH . H 6 HOH A 211 711 193 HOH HOH . H 6 HOH A 212 712 208 HOH HOH . H 6 HOH A 213 713 56 HOH HOH . H 6 HOH A 214 714 133 HOH HOH . H 6 HOH A 215 715 213 HOH HOH . H 6 HOH A 216 716 203 HOH HOH . H 6 HOH A 217 717 231 HOH HOH . H 6 HOH A 218 718 143 HOH HOH . H 6 HOH A 219 719 238 HOH HOH . H 6 HOH A 220 720 135 HOH HOH . H 6 HOH A 221 721 139 HOH HOH . H 6 HOH A 222 722 152 HOH HOH . H 6 HOH A 223 723 46 HOH HOH . H 6 HOH A 224 724 196 HOH HOH . H 6 HOH A 225 725 134 HOH HOH . H 6 HOH A 226 726 148 HOH HOH . H 6 HOH A 227 727 176 HOH HOH . H 6 HOH A 228 728 182 HOH HOH . H 6 HOH A 229 729 207 HOH HOH . H 6 HOH A 230 730 70 HOH HOH . H 6 HOH A 231 731 218 HOH HOH . H 6 HOH A 232 732 161 HOH HOH . H 6 HOH A 233 733 202 HOH HOH . H 6 HOH A 234 734 137 HOH HOH . H 6 HOH A 235 735 57 HOH HOH . H 6 HOH A 236 736 219 HOH HOH . H 6 HOH A 237 737 170 HOH HOH . H 6 HOH A 238 738 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 -32.336 40.984 -0.364 1 46.69 ? C1 PEG 403 A 1 HETATM 2 O O1 PEG . . . D 4 -33.196 42.107 -0.792 1 38.79 ? O1 PEG 403 A 1 HETATM 3 C C2 PEG . . . D 4 -31.223 40.66 -1.352 1 45.91 ? C2 PEG 403 A 1 HETATM 4 O O2 PEG . . . D 4 -31.281 39.502 -2.191 1 55.5 ? O2 PEG 403 A 1 HETATM 5 C C3 PEG . . . D 4 -30.598 39.614 -3.46 1 47.34 ? C3 PEG 403 A 1 HETATM 6 C C4 PEG . . . D 4 -31.543 40.353 -4.435 1 49.82 ? C4 PEG 403 A 1 HETATM 7 O O4 PEG . . . D 4 -32.081 39.525 -5.462 1 45.91 ? O4 PEG 403 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #