data_5MIU # _model_server_result.job_id xi9QyCeOhZOAILiK5l4eAg _model_server_result.datetime_utc '2024-10-19 10:26:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5miu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 5MIU # _exptl.entry_id 5MIU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MIU _cell.length_a 96.04 _cell.length_b 110.06 _cell.length_c 119.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 5MIU _atom_sites.fract_transf_matrix[1][1] 0.010412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009086 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 701 1611 FAD FAD . D 2 FAD B 1 701 1611 FAD FAD . E 3 HOH A 1 801 138 HOH HOH . E 3 HOH A 2 802 97 HOH HOH . E 3 HOH A 3 803 13 HOH HOH . E 3 HOH A 4 804 20 HOH HOH . E 3 HOH A 5 805 180 HOH HOH . E 3 HOH A 6 806 10 HOH HOH . E 3 HOH A 7 807 2 HOH HOH . E 3 HOH A 8 808 141 HOH HOH . E 3 HOH A 9 809 44 HOH HOH . E 3 HOH A 10 810 3 HOH HOH . F 3 HOH B 1 801 186 HOH HOH . F 3 HOH B 2 802 130 HOH HOH . F 3 HOH B 3 803 19 HOH HOH . F 3 HOH B 4 804 4 HOH HOH . F 3 HOH B 5 805 1 HOH HOH . F 3 HOH B 6 806 164 HOH HOH . F 3 HOH B 7 807 17 HOH HOH . F 3 HOH B 8 808 6 HOH HOH . F 3 HOH B 9 809 100 HOH HOH . F 3 HOH B 10 810 24 HOH HOH . F 3 HOH B 11 811 124 HOH HOH . F 3 HOH B 12 812 185 HOH HOH . F 3 HOH B 13 813 188 HOH HOH . F 3 HOH B 14 814 187 HOH HOH . F 3 HOH B 15 815 189 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 -5.049 12.314 -41.306 1 50.43 ? PA FAD 701 A 1 HETATM 2 O O1A FAD . . . C 2 -5.5 13.517 -42.113 1 49.78 ? O1A FAD 701 A 1 HETATM 3 O O2A FAD . . . C 2 -3.979 12.457 -40.252 1 49.99 ? O2A FAD 701 A 1 HETATM 4 O O5B FAD . . . C 2 -4.484 11.229 -42.352 1 50.37 ? O5B FAD 701 A 1 HETATM 5 C C5B FAD . . . C 2 -5.079 10.956 -43.618 1 50.06 ? C5B FAD 701 A 1 HETATM 6 C C4B FAD . . . C 2 -3.97 10.781 -44.645 1 50.53 ? C4B FAD 701 A 1 HETATM 7 O O4B FAD . . . C 2 -4.314 9.771 -45.594 1 50.1 ? O4B FAD 701 A 1 HETATM 8 C C3B FAD . . . C 2 -3.717 12.057 -45.423 1 51.71 ? C3B FAD 701 A 1 HETATM 9 O O3B FAD . . . C 2 -2.317 12.275 -45.584 1 52.67 ? O3B FAD 701 A 1 HETATM 10 C C2B FAD . . . C 2 -4.319 11.795 -46.777 1 52.83 ? C2B FAD 701 A 1 HETATM 11 O O2B FAD . . . C 2 -3.609 12.474 -47.819 1 55.29 ? O2B FAD 701 A 1 HETATM 12 C C1B FAD . . . C 2 -4.214 10.289 -46.917 1 51.8 ? C1B FAD 701 A 1 HETATM 13 N N9A FAD . . . C 2 -5.273 9.759 -47.816 1 52.85 ? N9A FAD 701 A 1 HETATM 14 C C8A FAD . . . C 2 -6.587 10.063 -47.815 1 52.55 ? C8A FAD 701 A 1 HETATM 15 N N7A FAD . . . C 2 -7.254 9.39 -48.785 1 53.5 ? N7A FAD 701 A 1 HETATM 16 C C5A FAD . . . C 2 -6.349 8.643 -49.426 1 54.85 ? C5A FAD 701 A 1 HETATM 17 C C6A FAD . . . C 2 -6.375 7.691 -50.549 1 56.58 ? C6A FAD 701 A 1 HETATM 18 N N6A FAD . . . C 2 -7.554 7.437 -51.155 1 58.14 ? N6A FAD 701 A 1 HETATM 19 N N1A FAD . . . C 2 -5.208 7.105 -50.932 1 56.22 ? N1A FAD 701 A 1 HETATM 20 C C2A FAD . . . C 2 -4.039 7.364 -50.309 1 55.46 ? C2A FAD 701 A 1 HETATM 21 N N3A FAD . . . C 2 -3.952 8.222 -49.27 1 56.37 ? N3A FAD 701 A 1 HETATM 22 C C4A FAD . . . C 2 -5.047 8.882 -48.794 1 54.95 ? C4A FAD 701 A 1 HETATM 23 N N1 FAD . . . C 2 -6.596 16.991 -32.591 1 46.91 ? N1 FAD 701 A 1 HETATM 24 C C2 FAD . . . C 2 -6.558 17.119 -31.236 1 49.41 ? C2 FAD 701 A 1 HETATM 25 O O2 FAD . . . C 2 -7.061 16.197 -30.534 1 51.8 ? O2 FAD 701 A 1 HETATM 26 N N3 FAD . . . C 2 -5.997 18.189 -30.622 1 48.8 ? N3 FAD 701 A 1 HETATM 27 C C4 FAD . . . C 2 -5.44 19.191 -31.302 1 47.06 ? C4 FAD 701 A 1 HETATM 28 O O4 FAD . . . C 2 -4.94 20.162 -30.707 1 47.21 ? O4 FAD 701 A 1 HETATM 29 C C4X FAD . . . C 2 -5.442 19.115 -32.774 1 45.73 ? C4X FAD 701 A 1 HETATM 30 N N5 FAD . . . C 2 -4.896 20.085 -33.515 1 45.7 ? N5 FAD 701 A 1 HETATM 31 C C5X FAD . . . C 2 -4.904 20.002 -34.861 1 45.56 ? C5X FAD 701 A 1 HETATM 32 C C6 FAD . . . C 2 -4.327 21.033 -35.585 1 44.8 ? C6 FAD 701 A 1 HETATM 33 C C7 FAD . . . C 2 -4.314 20.998 -36.968 1 43.62 ? C7 FAD 701 A 1 HETATM 34 C C7M FAD . . . C 2 -3.683 22.131 -37.726 1 44.53 ? C7M FAD 701 A 1 HETATM 35 C C8 FAD . . . C 2 -4.918 19.852 -37.68 1 42.86 ? C8 FAD 701 A 1 HETATM 36 C C8M FAD . . . C 2 -4.914 19.809 -39.175 1 42.8 ? C8M FAD 701 A 1 HETATM 37 C C9 FAD . . . C 2 -5.494 18.81 -36.969 1 44.63 ? C9 FAD 701 A 1 HETATM 38 C C9A FAD . . . C 2 -5.516 18.834 -35.569 1 45.72 ? C9A FAD 701 A 1 HETATM 39 N N10 FAD . . . C 2 -6.091 17.79 -34.797 1 45.69 ? N10 FAD 701 A 1 HETATM 40 C C10 FAD . . . C 2 -6.069 17.928 -33.398 1 45.28 ? C10 FAD 701 A 1 HETATM 41 C C1' FAD . . . C 2 -6.732 16.616 -35.407 1 47.25 ? C1' FAD 701 A 1 HETATM 42 C C2' FAD . . . C 2 -5.79 15.476 -35.778 1 48.91 ? C2' FAD 701 A 1 HETATM 43 O O2' FAD . . . C 2 -4.591 15.889 -36.435 1 50.75 ? O2' FAD 701 A 1 HETATM 44 C C3' FAD . . . C 2 -6.528 14.556 -36.726 1 50.62 ? C3' FAD 701 A 1 HETATM 45 O O3' FAD . . . C 2 -7.655 14.027 -36.027 1 53.19 ? O3' FAD 701 A 1 HETATM 46 C C4' FAD . . . C 2 -5.625 13.429 -37.201 1 51.44 ? C4' FAD 701 A 1 HETATM 47 O O4' FAD . . . C 2 -4.821 13.944 -38.265 1 51.76 ? O4' FAD 701 A 1 HETATM 48 C C5' FAD . . . C 2 -6.466 12.232 -37.644 1 50.6 ? C5' FAD 701 A 1 HETATM 49 O O5' FAD . . . C 2 -5.671 11.172 -38.155 1 49.14 ? O5' FAD 701 A 1 HETATM 50 P P FAD . . . C 2 -6.173 10.396 -39.472 1 51.18 ? P FAD 701 A 1 HETATM 51 O O1P FAD . . . C 2 -5.092 9.445 -39.944 1 53.12 ? O1P FAD 701 A 1 HETATM 52 O O2P FAD . . . C 2 -7.542 9.809 -39.194 1 50.17 ? O2P FAD 701 A 1 HETATM 53 O O3P FAD . . . C 2 -6.309 11.601 -40.565 1 51.25 ? O3P FAD 701 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #