data_5MJG # _model_server_result.job_id eGXfhU7LGF1z6MtXKOKeNA _model_server_result.datetime_utc '2024-11-24 12:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mjg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5MJG # _exptl.entry_id 5MJG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S,R MESO-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MJG _cell.length_a 58.4 _cell.length_b 58.4 _cell.length_c 152.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MJG _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 66 A CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 71 A CYS 71 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 121 A CYS 121 1_555 A SG CYS 193 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 126 A CYS 126 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 A SG CYS 134 A CYS 134 1_555 A SG CYS 145 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 A SG CYS 149 A CYS 149 1_555 A SG CYS 158 A CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 A SG CYS 159 A CYS 159 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A OE2 GLU 89 A GLU 89 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc2 A OG SER 103 A SER 103 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc3 C NA NA . A NA 302 1_555 D O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id SRT _chem_comp.mon_nstd_flag . _chem_comp.name 'S,R MESO-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 SRT sing 269 n n O1 H1 SRT sing 270 n n O11 C1 SRT doub 271 n n C1 C2 SRT sing 272 n n C2 O2 SRT sing 273 n n C2 C3 SRT sing 274 n n C2 H2 SRT sing 275 n n O2 HA SRT sing 276 n n C3 O3 SRT sing 277 n n C3 C4 SRT sing 278 n n C3 H3 SRT sing 279 n n O3 HB SRT sing 280 n n C4 O4 SRT doub 281 n n C4 O41 SRT sing 282 n n O41 H41 SRT sing 283 n n # _atom_sites.entry_id 5MJG _atom_sites.fract_transf_matrix[1][1] 0.017123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SRT A 1 301 1 SRT SRT . C 3 NA A 1 302 1 NA NA . D 4 HOH A 1 401 85 HOH HOH . D 4 HOH A 2 402 65 HOH HOH . D 4 HOH A 3 403 31 HOH HOH . D 4 HOH A 4 404 44 HOH HOH . D 4 HOH A 5 405 22 HOH HOH . D 4 HOH A 6 406 157 HOH HOH . D 4 HOH A 7 407 112 HOH HOH . D 4 HOH A 8 408 136 HOH HOH . D 4 HOH A 9 409 130 HOH HOH . D 4 HOH A 10 410 144 HOH HOH . D 4 HOH A 11 411 163 HOH HOH . D 4 HOH A 12 412 134 HOH HOH . D 4 HOH A 13 413 105 HOH HOH . D 4 HOH A 14 414 29 HOH HOH . D 4 HOH A 15 415 8 HOH HOH . D 4 HOH A 16 416 167 HOH HOH . D 4 HOH A 17 417 17 HOH HOH . D 4 HOH A 18 418 151 HOH HOH . D 4 HOH A 19 419 16 HOH HOH . D 4 HOH A 20 420 45 HOH HOH . D 4 HOH A 21 421 15 HOH HOH . D 4 HOH A 22 422 28 HOH HOH . D 4 HOH A 23 423 20 HOH HOH . D 4 HOH A 24 424 42 HOH HOH . D 4 HOH A 25 425 27 HOH HOH . D 4 HOH A 26 426 43 HOH HOH . D 4 HOH A 27 427 40 HOH HOH . D 4 HOH A 28 428 58 HOH HOH . D 4 HOH A 29 429 38 HOH HOH . D 4 HOH A 30 430 162 HOH HOH . D 4 HOH A 31 431 140 HOH HOH . D 4 HOH A 32 432 23 HOH HOH . D 4 HOH A 33 433 76 HOH HOH . D 4 HOH A 34 434 35 HOH HOH . D 4 HOH A 35 435 9 HOH HOH . D 4 HOH A 36 436 26 HOH HOH . D 4 HOH A 37 437 1 HOH HOH . D 4 HOH A 38 438 41 HOH HOH . D 4 HOH A 39 439 127 HOH HOH . D 4 HOH A 40 440 115 HOH HOH . D 4 HOH A 41 441 25 HOH HOH . D 4 HOH A 42 442 50 HOH HOH . D 4 HOH A 43 443 59 HOH HOH . D 4 HOH A 44 444 159 HOH HOH . D 4 HOH A 45 445 132 HOH HOH . D 4 HOH A 46 446 11 HOH HOH . D 4 HOH A 47 447 24 HOH HOH . D 4 HOH A 48 448 128 HOH HOH . D 4 HOH A 49 449 7 HOH HOH . D 4 HOH A 50 450 149 HOH HOH . D 4 HOH A 51 451 94 HOH HOH . D 4 HOH A 52 452 56 HOH HOH . D 4 HOH A 53 453 73 HOH HOH . D 4 HOH A 54 454 99 HOH HOH . D 4 HOH A 55 455 100 HOH HOH . D 4 HOH A 56 456 14 HOH HOH . D 4 HOH A 57 457 91 HOH HOH . D 4 HOH A 58 458 18 HOH HOH . D 4 HOH A 59 459 34 HOH HOH . D 4 HOH A 60 460 2 HOH HOH . D 4 HOH A 61 461 161 HOH HOH . D 4 HOH A 62 462 129 HOH HOH . D 4 HOH A 63 463 79 HOH HOH . D 4 HOH A 64 464 4 HOH HOH . D 4 HOH A 65 465 110 HOH HOH . D 4 HOH A 66 466 78 HOH HOH . D 4 HOH A 67 467 30 HOH HOH . D 4 HOH A 68 468 3 HOH HOH . D 4 HOH A 69 469 49 HOH HOH . D 4 HOH A 70 470 52 HOH HOH . D 4 HOH A 71 471 47 HOH HOH . D 4 HOH A 72 472 92 HOH HOH . D 4 HOH A 73 473 51 HOH HOH . D 4 HOH A 74 474 113 HOH HOH . D 4 HOH A 75 475 10 HOH HOH . D 4 HOH A 76 476 119 HOH HOH . D 4 HOH A 77 477 5 HOH HOH . D 4 HOH A 78 478 37 HOH HOH . D 4 HOH A 79 479 36 HOH HOH . D 4 HOH A 80 480 77 HOH HOH . D 4 HOH A 81 481 103 HOH HOH . D 4 HOH A 82 482 89 HOH HOH . D 4 HOH A 83 483 160 HOH HOH . D 4 HOH A 84 484 147 HOH HOH . D 4 HOH A 85 485 54 HOH HOH . D 4 HOH A 86 486 107 HOH HOH . D 4 HOH A 87 487 80 HOH HOH . D 4 HOH A 88 488 164 HOH HOH . D 4 HOH A 89 489 19 HOH HOH . D 4 HOH A 90 490 39 HOH HOH . D 4 HOH A 91 491 158 HOH HOH . D 4 HOH A 92 492 32 HOH HOH . D 4 HOH A 93 493 61 HOH HOH . D 4 HOH A 94 494 67 HOH HOH . D 4 HOH A 95 495 86 HOH HOH . D 4 HOH A 96 496 116 HOH HOH . D 4 HOH A 97 497 168 HOH HOH . D 4 HOH A 98 498 46 HOH HOH . D 4 HOH A 99 499 143 HOH HOH . D 4 HOH A 100 500 150 HOH HOH . D 4 HOH A 101 501 142 HOH HOH . D 4 HOH A 102 502 93 HOH HOH . D 4 HOH A 103 503 13 HOH HOH . D 4 HOH A 104 504 55 HOH HOH . D 4 HOH A 105 505 70 HOH HOH . D 4 HOH A 106 506 21 HOH HOH . D 4 HOH A 107 507 165 HOH HOH . D 4 HOH A 108 508 114 HOH HOH . D 4 HOH A 109 509 108 HOH HOH . D 4 HOH A 110 510 145 HOH HOH . D 4 HOH A 111 511 97 HOH HOH . D 4 HOH A 112 512 106 HOH HOH . D 4 HOH A 113 513 138 HOH HOH . D 4 HOH A 114 514 75 HOH HOH . D 4 HOH A 115 515 66 HOH HOH . D 4 HOH A 116 516 33 HOH HOH . D 4 HOH A 117 517 124 HOH HOH . D 4 HOH A 118 518 109 HOH HOH . D 4 HOH A 119 519 84 HOH HOH . D 4 HOH A 120 520 83 HOH HOH . D 4 HOH A 121 521 131 HOH HOH . D 4 HOH A 122 522 62 HOH HOH . D 4 HOH A 123 523 125 HOH HOH . D 4 HOH A 124 524 71 HOH HOH . D 4 HOH A 125 525 12 HOH HOH . D 4 HOH A 126 526 90 HOH HOH . D 4 HOH A 127 527 135 HOH HOH . D 4 HOH A 128 528 48 HOH HOH . D 4 HOH A 129 529 81 HOH HOH . D 4 HOH A 130 530 53 HOH HOH . D 4 HOH A 131 531 156 HOH HOH . D 4 HOH A 132 532 104 HOH HOH . D 4 HOH A 133 533 153 HOH HOH . D 4 HOH A 134 534 96 HOH HOH . D 4 HOH A 135 535 60 HOH HOH . D 4 HOH A 136 536 141 HOH HOH . D 4 HOH A 137 537 72 HOH HOH . D 4 HOH A 138 538 88 HOH HOH . D 4 HOH A 139 539 146 HOH HOH . D 4 HOH A 140 540 120 HOH HOH . D 4 HOH A 141 541 139 HOH HOH . D 4 HOH A 142 542 133 HOH HOH . D 4 HOH A 143 543 152 HOH HOH . D 4 HOH A 144 544 148 HOH HOH . D 4 HOH A 145 545 137 HOH HOH . D 4 HOH A 146 546 64 HOH HOH . D 4 HOH A 147 547 166 HOH HOH . D 4 HOH A 148 548 82 HOH HOH . D 4 HOH A 149 549 155 HOH HOH . D 4 HOH A 150 550 69 HOH HOH . D 4 HOH A 151 551 6 HOH HOH . D 4 HOH A 152 552 87 HOH HOH . D 4 HOH A 153 553 63 HOH HOH . D 4 HOH A 154 554 57 HOH HOH . D 4 HOH A 155 555 101 HOH HOH . D 4 HOH A 156 556 122 HOH HOH . D 4 HOH A 157 557 68 HOH HOH . D 4 HOH A 158 558 117 HOH HOH . D 4 HOH A 159 559 121 HOH HOH . D 4 HOH A 160 560 123 HOH HOH . D 4 HOH A 161 561 98 HOH HOH . D 4 HOH A 162 562 126 HOH HOH . D 4 HOH A 163 563 95 HOH HOH . D 4 HOH A 164 564 154 HOH HOH . D 4 HOH A 165 565 102 HOH HOH . D 4 HOH A 166 566 111 HOH HOH . D 4 HOH A 167 567 74 HOH HOH . D 4 HOH A 168 568 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SRT . . . B 2 16.502 18.246 11.507 1 15.88 ? O1 SRT 301 A 1 HETATM 2 O O11 SRT . . . B 2 17.253 18.653 13.512 1 16.04 ? O11 SRT 301 A 1 HETATM 3 C C1 SRT . . . B 2 16.293 18.598 12.699 1 15.73 ? C1 SRT 301 A 1 HETATM 4 C C2 SRT . . . B 2 14.888 18.964 13.18 1 15.16 ? C2 SRT 301 A 1 HETATM 5 O O2 SRT . . . B 2 14.769 20.356 13.22 1 16.71 ? O2 SRT 301 A 1 HETATM 6 C C3 SRT . . . B 2 13.823 18.382 12.255 1 12.5 ? C3 SRT 301 A 1 HETATM 7 O O3 SRT . . . B 2 13.467 17.108 12.719 1 13.25 ? O3 SRT 301 A 1 HETATM 8 C C4 SRT . . . B 2 12.581 19.273 12.253 1 9.19 ? C4 SRT 301 A 1 HETATM 9 O O4 SRT . . . B 2 12.51 20.263 11.475 1 7.35 ? O4 SRT 301 A 1 HETATM 10 O O41 SRT . . . B 2 11.621 19.012 13.029 1 7.86 ? O41 SRT 301 A 1 HETATM 11 H H2 SRT . . . B 2 14.757 18.61 14.074 1 18.19 ? H2 SRT 301 A 1 HETATM 12 H HA SRT . . . B 2 14.358 20.585 13.927 1 20.06 ? HA SRT 301 A 1 HETATM 13 H H3 SRT . . . B 2 14.176 18.314 11.354 1 15 ? H3 SRT 301 A 1 HETATM 14 H HB SRT . . . B 2 13.497 16.554 12.076 1 15.9 ? HB SRT 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #