data_5MJS # _model_server_result.job_id QHBEQuJUCcjP9BkhB0bmKA _model_server_result.datetime_utc '2025-03-06 00:47:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mjs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":500}' # _entry.id 5MJS # _exptl.entry_id 5MJS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 523.18 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MJS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N # _chem_comp.formula 'C10 H16 N5 O14 P3' _chem_comp.formula_weight 523.18 _chem_comp.id GTP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5MJS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 GDP A 1 500 500 GDP GDP . K 5 GTP E 1 500 500 GTP GTP . L 5 GTP F 1 500 500 GTP GTP . M 5 GTP G 1 500 500 GTP GTP . N 5 GTP H 1 500 500 GTP GTP . O 4 GDP J 1 500 500 GDP GDP . P 4 GDP B 1 500 500 GDP GDP . Q 4 GDP C 1 500 500 GDP GDP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GTP . . . L 5 36.623 52.451 192.947 1 62.11 ? PG GTP 500 F 1 HETATM 2 O O1G GTP . . . L 5 36.567 52.013 191.522 1 62.11 ? O1G GTP 500 F 1 HETATM 3 O O2G GTP . . . L 5 37.85 51.868 193.563 1 62.11 ? O2G GTP 500 F 1 HETATM 4 O O3G GTP . . . L 5 35.401 52.03 193.711 1 62.11 ? O3G GTP 500 F 1 HETATM 5 O O3B GTP . . . L 5 36.673 54.029 193.004 1 62.11 ? O3B GTP 500 F 1 HETATM 6 P PB GTP . . . L 5 36.302 54.642 194.424 1 62.11 ? PB GTP 500 F 1 HETATM 7 O O1B GTP . . . L 5 34.838 54.96 194.536 1 62.11 ? O1B GTP 500 F 1 HETATM 8 O O2B GTP . . . L 5 36.727 53.765 195.56 1 62.11 ? O2B GTP 500 F 1 HETATM 9 O O3A GTP . . . L 5 37.271 55.895 194.336 1 62.11 ? O3A GTP 500 F 1 HETATM 10 P PA GTP . . . L 5 38.773 55.561 193.887 1 62.11 ? PA GTP 500 F 1 HETATM 11 O O1A GTP . . . L 5 39.225 54.203 194.331 1 62.11 ? O1A GTP 500 F 1 HETATM 12 O O2A GTP . . . L 5 39.664 56.584 194.516 1 62.11 ? O2A GTP 500 F 1 HETATM 13 O O5' GTP . . . L 5 38.856 55.753 192.304 1 62.11 ? O5' GTP 500 F 1 HETATM 14 C C5' GTP . . . L 5 39.145 57.047 191.853 1 62.11 ? C5' GTP 500 F 1 HETATM 15 C C4' GTP . . . L 5 40.553 57.179 191.286 1 62.11 ? C4' GTP 500 F 1 HETATM 16 O O4' GTP . . . L 5 40.422 58.004 190.161 1 62.11 ? O4' GTP 500 F 1 HETATM 17 C C3' GTP . . . L 5 41.526 57.924 192.193 1 62.11 ? C3' GTP 500 F 1 HETATM 18 O O3' GTP . . . L 5 42.555 57.074 192.615 1 62.11 ? O3' GTP 500 F 1 HETATM 19 C C2' GTP . . . L 5 42.17 59.023 191.388 1 62.11 ? C2' GTP 500 F 1 HETATM 20 O O2' GTP . . . L 5 43.518 58.706 191.207 1 62.11 ? O2' GTP 500 F 1 HETATM 21 C C1' GTP . . . L 5 41.537 58.855 190.043 1 62.11 ? C1' GTP 500 F 1 HETATM 22 N N9 GTP . . . L 5 41.123 60.084 189.378 1 62.11 ? N9 GTP 500 F 1 HETATM 23 C C8 GTP . . . L 5 41.946 60.834 188.615 1 62.11 ? C8 GTP 500 F 1 HETATM 24 N N7 GTP . . . L 5 41.257 61.858 188.098 1 62.11 ? N7 GTP 500 F 1 HETATM 25 C C5 GTP . . . L 5 39.992 61.738 188.503 1 62.11 ? C5 GTP 500 F 1 HETATM 26 C C6 GTP . . . L 5 38.894 62.498 188.227 1 62.11 ? C6 GTP 500 F 1 HETATM 27 O O6 GTP . . . L 5 39.022 63.498 187.544 1 62.11 ? O6 GTP 500 F 1 HETATM 28 N N1 GTP . . . L 5 37.692 62.197 188.787 1 62.11 ? N1 GTP 500 F 1 HETATM 29 C C2 GTP . . . L 5 37.586 61.093 189.585 1 62.11 ? C2 GTP 500 F 1 HETATM 30 N N2 GTP . . . L 5 36.398 60.779 190.091 1 62.11 ? N2 GTP 500 F 1 HETATM 31 N N3 GTP . . . L 5 38.686 60.298 189.831 1 62.11 ? N3 GTP 500 F 1 HETATM 32 C C4 GTP . . . L 5 39.877 60.627 189.3 1 62.11 ? C4 GTP 500 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #