data_5MJU # _model_server_result.job_id YOcMQu8-Elf2tjq_c0zwkg _model_server_result.datetime_utc '2024-12-06 16:08:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5MJU # _exptl.entry_id 5MJU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.475 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5MJU _cell.length_a 124.33 _cell.length_b 124.33 _cell.length_c 90.81 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_875 -y+3,x-y+2,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 248.66 215.345877 0 3 'crystal symmetry operation' 3_685 -x+y+1,-x+3,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -62.165 323.018815 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H22 N2 O3' _chem_comp.formula_weight 422.475 _chem_comp.id 6Z6 _chem_comp.mon_nstd_flag . _chem_comp.name 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O 6Z6 sing 1 n n O C1 6Z6 sing 2 n n C1 C2 6Z6 doub 3 n y C1 C6 6Z6 sing 4 n y C2 C3 6Z6 sing 5 n y C6 C5 6Z6 doub 6 n y C3 C4 6Z6 doub 7 n y C5 C4 6Z6 sing 8 n y C4 C7 6Z6 sing 9 n n N1 C16 6Z6 trip 10 n n C16 C15 6Z6 sing 11 n n C7 C15 6Z6 sing 12 n n C7 C8 6Z6 sing 13 n n O1 C9 6Z6 doub 14 n n C15 C14 6Z6 doub 15 n n C8 C9 6Z6 sing 16 n n C8 C13 6Z6 doub 17 n n C9 C10 6Z6 sing 18 n n C14 N 6Z6 sing 19 n n C14 O2 6Z6 sing 20 n n C24 C25 6Z6 doub 21 n y C24 C23 6Z6 sing 22 n y C13 O2 6Z6 sing 23 n n C13 C12 6Z6 sing 24 n n C10 C11 6Z6 sing 25 n n C25 C26 6Z6 sing 26 n y C23 C22 6Z6 doub 27 n y C12 C11 6Z6 sing 28 n n C11 C17 6Z6 sing 29 n n C26 C17 6Z6 doub 30 n y C26 C21 6Z6 sing 31 n y C17 C18 6Z6 sing 32 n y C22 C21 6Z6 sing 33 n y C21 C20 6Z6 doub 34 n y C18 C19 6Z6 doub 35 n y C20 C19 6Z6 sing 36 n y C2 H1 6Z6 sing 37 n n C5 H2 6Z6 sing 38 n n C6 H3 6Z6 sing 39 n n N H4 6Z6 sing 40 n n N H5 6Z6 sing 41 n n C3 H6 6Z6 sing 42 n n C H7 6Z6 sing 43 n n C H8 6Z6 sing 44 n n C H9 6Z6 sing 45 n n C10 H10 6Z6 sing 46 n n C10 H11 6Z6 sing 47 n n C11 H12 6Z6 sing 48 n n C12 H13 6Z6 sing 49 n n C12 H14 6Z6 sing 50 n n C18 H15 6Z6 sing 51 n n C19 H16 6Z6 sing 52 n n C20 H17 6Z6 sing 53 n n C22 H18 6Z6 sing 54 n n C23 H19 6Z6 sing 55 n n C24 H20 6Z6 sing 56 n n C25 H21 6Z6 sing 57 n n C7 H22 6Z6 sing 58 n n # _atom_sites.entry_id 5MJU _atom_sites.fract_transf_matrix[1][1] 0.008043 _atom_sites.fract_transf_matrix[1][2] 0.004644 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009287 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6Z6 A 1 601 503 6Z6 UCP . C 3 7O9 A 1 602 504 7O9 TFB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 6Z6 . . . B 2 63.722 154.456 9.819 1 90.61 ? N1 6Z6 601 A 1 HETATM 2 C C2 6Z6 . . . B 2 67.86 154.872 6.401 1 104.52 ? C2 6Z6 601 A 1 HETATM 3 O O2 6Z6 . . . B 2 66.772 157.23 12.139 1 92.74 ? O2 6Z6 601 A 1 HETATM 4 C C4 6Z6 . . . B 2 67.439 155.513 8.694 1 99.26 ? C4 6Z6 601 A 1 HETATM 5 C C5 6Z6 . . . B 2 67.327 156.834 8.276 1 97.35 ? C5 6Z6 601 A 1 HETATM 6 C C6 6Z6 . . . B 2 67.469 157.181 6.943 1 98.64 ? C6 6Z6 601 A 1 HETATM 7 O O1 6Z6 . . . B 2 69.802 153.993 10.569 1 108.99 ? O1 6Z6 601 A 1 HETATM 8 C C9 6Z6 . . . B 2 69.61 155.128 10.993 1 105.04 ? C9 6Z6 601 A 1 HETATM 9 C C8 6Z6 . . . B 2 68.264 155.694 11.067 1 99.62 ? C8 6Z6 601 A 1 HETATM 10 C C13 6Z6 . . . B 2 68.025 156.692 11.937 1 96.25 ? C13 6Z6 601 A 1 HETATM 11 C C14 6Z6 . . . B 2 65.702 156.686 11.477 1 92.83 ? C14 6Z6 601 A 1 HETATM 12 N N 6Z6 . . . B 2 64.573 157.253 11.904 1 90.27 ? N 6Z6 601 A 1 HETATM 13 C C15 6Z6 . . . B 2 65.844 155.645 10.623 1 94.94 ? C15 6Z6 601 A 1 HETATM 14 C C16 6Z6 . . . B 2 64.682 154.973 10.163 1 92.65 ? C16 6Z6 601 A 1 HETATM 15 C C7 6Z6 . . . B 2 67.192 155.131 10.152 1 98.97 ? C7 6Z6 601 A 1 HETATM 16 C C3 6Z6 . . . B 2 67.715 154.542 7.739 1 103.15 ? C3 6Z6 601 A 1 HETATM 17 C C1 6Z6 . . . B 2 67.73 156.199 5.999 1 102.27 ? C1 6Z6 601 A 1 HETATM 18 O O 6Z6 . . . B 2 67.817 156.725 4.732 1 102.48 ? O 6Z6 601 A 1 HETATM 19 C C 6Z6 . . . B 2 68.074 155.841 3.641 1 105.41 ? C 6Z6 601 A 1 HETATM 20 C C10 6Z6 . . . B 2 70.762 155.986 11.449 1 106.67 ? C10 6Z6 601 A 1 HETATM 21 C C11 6Z6 . . . B 2 70.426 156.695 12.756 1 104.93 ? C11 6Z6 601 A 1 HETATM 22 C C12 6Z6 . . . B 2 69.061 157.391 12.752 1 98.05 ? C12 6Z6 601 A 1 HETATM 23 C C17 6Z6 . . . B 2 71.573 157.435 13.429 1 108.82 ? C17 6Z6 601 A 1 HETATM 24 C C18 6Z6 . . . B 2 72.183 156.882 14.525 1 114.78 ? C18 6Z6 601 A 1 HETATM 25 C C19 6Z6 . . . B 2 73.225 157.514 15.185 1 117.31 ? C19 6Z6 601 A 1 HETATM 26 C C20 6Z6 . . . B 2 73.68 158.725 14.763 1 114.56 ? C20 6Z6 601 A 1 HETATM 27 C C21 6Z6 . . . B 2 73.101 159.36 13.64 1 109.14 ? C21 6Z6 601 A 1 HETATM 28 C C26 6Z6 . . . B 2 72.03 158.709 12.95 1 106.13 ? C26 6Z6 601 A 1 HETATM 29 C C22 6Z6 . . . B 2 73.544 160.629 13.191 1 107.34 ? C22 6Z6 601 A 1 HETATM 30 C C23 6Z6 . . . B 2 72.961 161.232 12.113 1 102.99 ? C23 6Z6 601 A 1 HETATM 31 C C24 6Z6 . . . B 2 71.926 160.61 11.431 1 99.96 ? C24 6Z6 601 A 1 HETATM 32 C C25 6Z6 . . . B 2 71.468 159.382 11.827 1 101.34 ? C25 6Z6 601 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 32 #