data_5MLE # _model_server_result.job_id zTBJV8bpmeh3yHO9cz_XMA _model_server_result.datetime_utc '2024-11-04 23:17:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mle # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":605}' # _entry.id 5MLE # _exptl.entry_id 5MLE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MLE _cell.length_a 70.9 _cell.length_b 185.82 _cell.length_c 196.31 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MLE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5MLE _atom_sites.fract_transf_matrix[1][1] 0.014104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG C 1 601 2 PEG PEG . D 3 EDO C 1 602 7 EDO EDO . E 3 EDO C 1 603 8 EDO EDO . F 3 EDO C 1 604 9 EDO EDO . G 3 EDO C 1 605 10 EDO EDO . H 3 EDO C 1 606 12 EDO EDO . I 3 EDO C 1 607 13 EDO EDO . J 4 NI C 1 608 4 NI NI . K 2 PEG A 1 601 1 PEG PEG . L 2 PEG A 1 602 3 PEG PEG . M 3 EDO A 1 603 1 EDO EDO . N 3 EDO A 1 604 5 EDO EDO . O 3 EDO A 1 605 6 EDO EDO . P 3 EDO A 1 606 11 EDO EDO . Q 4 NI A 1 607 3 NI NI . R 5 HOH C 1 701 337 HOH HOH . R 5 HOH C 2 702 407 HOH HOH . R 5 HOH C 3 703 18 HOH HOH . R 5 HOH C 4 704 412 HOH HOH . R 5 HOH C 5 705 353 HOH HOH . R 5 HOH C 6 706 331 HOH HOH . R 5 HOH C 7 707 356 HOH HOH . R 5 HOH C 8 708 411 HOH HOH . R 5 HOH C 9 709 357 HOH HOH . R 5 HOH C 10 710 355 HOH HOH . R 5 HOH C 11 711 339 HOH HOH . R 5 HOH C 12 712 28 HOH HOH . R 5 HOH C 13 713 22 HOH HOH . R 5 HOH C 14 714 332 HOH HOH . R 5 HOH C 15 715 373 HOH HOH . R 5 HOH C 16 716 153 HOH HOH . R 5 HOH C 17 717 364 HOH HOH . R 5 HOH C 18 718 330 HOH HOH . R 5 HOH C 19 719 398 HOH HOH . R 5 HOH C 20 720 328 HOH HOH . R 5 HOH C 21 721 9 HOH HOH . R 5 HOH C 22 722 24 HOH HOH . R 5 HOH C 23 723 30 HOH HOH . R 5 HOH C 24 724 395 HOH HOH . R 5 HOH C 25 725 3 HOH HOH . R 5 HOH C 26 726 178 HOH HOH . R 5 HOH C 27 727 319 HOH HOH . R 5 HOH C 28 728 6 HOH HOH . R 5 HOH C 29 729 42 HOH HOH . R 5 HOH C 30 730 62 HOH HOH . R 5 HOH C 31 731 252 HOH HOH . R 5 HOH C 32 732 349 HOH HOH . R 5 HOH C 33 733 36 HOH HOH . R 5 HOH C 34 734 360 HOH HOH . R 5 HOH C 35 735 372 HOH HOH . R 5 HOH C 36 736 351 HOH HOH . R 5 HOH C 37 737 138 HOH HOH . R 5 HOH C 38 738 340 HOH HOH . R 5 HOH C 39 739 217 HOH HOH . R 5 HOH C 40 740 52 HOH HOH . R 5 HOH C 41 741 369 HOH HOH . R 5 HOH C 42 742 402 HOH HOH . R 5 HOH C 43 743 379 HOH HOH . R 5 HOH C 44 744 404 HOH HOH . R 5 HOH C 45 745 117 HOH HOH . R 5 HOH C 46 746 39 HOH HOH . R 5 HOH C 47 747 127 HOH HOH . R 5 HOH C 48 748 114 HOH HOH . R 5 HOH C 49 749 35 HOH HOH . R 5 HOH C 50 750 365 HOH HOH . R 5 HOH C 51 751 363 HOH HOH . R 5 HOH C 52 752 95 HOH HOH . R 5 HOH C 53 753 118 HOH HOH . R 5 HOH C 54 754 65 HOH HOH . R 5 HOH C 55 755 76 HOH HOH . R 5 HOH C 56 756 73 HOH HOH . R 5 HOH C 57 757 415 HOH HOH . R 5 HOH C 58 758 46 HOH HOH . R 5 HOH C 59 759 15 HOH HOH . R 5 HOH C 60 760 49 HOH HOH . R 5 HOH C 61 761 341 HOH HOH . R 5 HOH C 62 762 37 HOH HOH . R 5 HOH C 63 763 88 HOH HOH . R 5 HOH C 64 764 8 HOH HOH . R 5 HOH C 65 765 23 HOH HOH . R 5 HOH C 66 766 345 HOH HOH . R 5 HOH C 67 767 416 HOH HOH . R 5 HOH C 68 768 375 HOH HOH . R 5 HOH C 69 769 358 HOH HOH . R 5 HOH C 70 770 370 HOH HOH . R 5 HOH C 71 771 376 HOH HOH . R 5 HOH C 72 772 87 HOH HOH . R 5 HOH C 73 773 64 HOH HOH . R 5 HOH C 74 774 139 HOH HOH . R 5 HOH C 75 775 354 HOH HOH . R 5 HOH C 76 776 350 HOH HOH . R 5 HOH C 77 777 361 HOH HOH . R 5 HOH C 78 778 368 HOH HOH . R 5 HOH C 79 779 169 HOH HOH . R 5 HOH C 80 780 377 HOH HOH . R 5 HOH C 81 781 43 HOH HOH . R 5 HOH C 82 782 405 HOH HOH . R 5 HOH C 83 783 333 HOH HOH . R 5 HOH C 84 784 208 HOH HOH . R 5 HOH C 85 785 400 HOH HOH . R 5 HOH C 86 786 5 HOH HOH . R 5 HOH C 87 787 378 HOH HOH . R 5 HOH C 88 788 380 HOH HOH . R 5 HOH C 89 789 420 HOH HOH . R 5 HOH C 90 790 424 HOH HOH . R 5 HOH C 91 791 366 HOH HOH . R 5 HOH C 92 792 171 HOH HOH . R 5 HOH C 93 793 399 HOH HOH . R 5 HOH C 94 794 374 HOH HOH . R 5 HOH C 95 795 381 HOH HOH . R 5 HOH C 96 796 362 HOH HOH . R 5 HOH C 97 797 409 HOH HOH . R 5 HOH C 98 798 135 HOH HOH . R 5 HOH C 99 799 382 HOH HOH . R 5 HOH C 100 800 413 HOH HOH . R 5 HOH C 101 801 367 HOH HOH . R 5 HOH C 102 802 371 HOH HOH . R 5 HOH C 103 803 359 HOH HOH . S 5 HOH A 1 701 388 HOH HOH . S 5 HOH A 2 702 387 HOH HOH . S 5 HOH A 3 703 384 HOH HOH . S 5 HOH A 4 704 334 HOH HOH . S 5 HOH A 5 705 343 HOH HOH . S 5 HOH A 6 706 386 HOH HOH . S 5 HOH A 7 707 419 HOH HOH . S 5 HOH A 8 708 391 HOH HOH . S 5 HOH A 9 709 394 HOH HOH . S 5 HOH A 10 710 421 HOH HOH . S 5 HOH A 11 711 106 HOH HOH . S 5 HOH A 12 712 348 HOH HOH . S 5 HOH A 13 713 406 HOH HOH . S 5 HOH A 14 714 303 HOH HOH . S 5 HOH A 15 715 383 HOH HOH . S 5 HOH A 16 716 423 HOH HOH . S 5 HOH A 17 717 389 HOH HOH . S 5 HOH A 18 718 84 HOH HOH . S 5 HOH A 19 719 209 HOH HOH . S 5 HOH A 20 720 327 HOH HOH . S 5 HOH A 21 721 140 HOH HOH . S 5 HOH A 22 722 344 HOH HOH . S 5 HOH A 23 723 385 HOH HOH . S 5 HOH A 24 724 322 HOH HOH . S 5 HOH A 25 725 401 HOH HOH . S 5 HOH A 26 726 40 HOH HOH . S 5 HOH A 27 727 26 HOH HOH . S 5 HOH A 28 728 342 HOH HOH . S 5 HOH A 29 729 113 HOH HOH . S 5 HOH A 30 730 29 HOH HOH . S 5 HOH A 31 731 422 HOH HOH . S 5 HOH A 32 732 324 HOH HOH . S 5 HOH A 33 733 68 HOH HOH . S 5 HOH A 34 734 1 HOH HOH . S 5 HOH A 35 735 318 HOH HOH . S 5 HOH A 36 736 414 HOH HOH . S 5 HOH A 37 737 390 HOH HOH . S 5 HOH A 38 738 4 HOH HOH . S 5 HOH A 39 739 115 HOH HOH . S 5 HOH A 40 740 50 HOH HOH . S 5 HOH A 41 741 346 HOH HOH . S 5 HOH A 42 742 12 HOH HOH . S 5 HOH A 43 743 338 HOH HOH . S 5 HOH A 44 744 403 HOH HOH . S 5 HOH A 45 745 408 HOH HOH . S 5 HOH A 46 746 91 HOH HOH . S 5 HOH A 47 747 323 HOH HOH . S 5 HOH A 48 748 112 HOH HOH . S 5 HOH A 49 749 70 HOH HOH . S 5 HOH A 50 750 396 HOH HOH . S 5 HOH A 51 751 111 HOH HOH . S 5 HOH A 52 752 59 HOH HOH . S 5 HOH A 53 753 245 HOH HOH . S 5 HOH A 54 754 83 HOH HOH . S 5 HOH A 55 755 74 HOH HOH . S 5 HOH A 56 756 98 HOH HOH . S 5 HOH A 57 757 172 HOH HOH . S 5 HOH A 58 758 392 HOH HOH . S 5 HOH A 59 759 11 HOH HOH . S 5 HOH A 60 760 352 HOH HOH . S 5 HOH A 61 761 329 HOH HOH . S 5 HOH A 62 762 326 HOH HOH . S 5 HOH A 63 763 16 HOH HOH . S 5 HOH A 64 764 410 HOH HOH . S 5 HOH A 65 765 75 HOH HOH . S 5 HOH A 66 766 204 HOH HOH . S 5 HOH A 67 767 425 HOH HOH . S 5 HOH A 68 768 335 HOH HOH . S 5 HOH A 69 769 418 HOH HOH . S 5 HOH A 70 770 397 HOH HOH . S 5 HOH A 71 771 393 HOH HOH . S 5 HOH A 72 772 417 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . O 3 14.275 -94.815 17.392 1 56.52 ? C1 EDO 605 A 1 HETATM 2 O O1 EDO . . . O 3 12.888 -95.169 17.333 1 54.05 ? O1 EDO 605 A 1 HETATM 3 C C2 EDO . . . O 3 14.442 -93.354 17.788 1 56.5 ? C2 EDO 605 A 1 HETATM 4 O O2 EDO . . . O 3 14.936 -92.617 16.662 1 57.23 ? O2 EDO 605 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #