data_5MLH # _model_server_result.job_id yNwb7tEenx0ihyI8IduLMg _model_server_result.datetime_utc '2024-10-19 13:37:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mlh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 5MLH # _exptl.entry_id 5MLH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MLH _cell.length_a 79.52 _cell.length_b 79.52 _cell.length_c 138.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MLH _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 179 A TYR 179 1_555 F CA CA . A CA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.958 ? metalc ? metalc2 A OD2 ASP 252 A ASP 252 1_555 B NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc3 B NA NA . A NA 401 1_555 G O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.175 ? metalc ? metalc4 B NA NA . A NA 401 1_555 G O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5MLH _atom_sites.fract_transf_matrix[1][1] 0.012575 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 401 1392 NA NA . C 3 XOG A 1 402 1 XOG XXX . D 4 GOL A 1 403 1 GOL GOL . E 5 NAP A 1 404 2 NAP NAP . F 6 CA A 1 405 1 CA CA . G 7 HOH A 1 501 25 HOH HOH . G 7 HOH A 2 502 215 HOH HOH . G 7 HOH A 3 503 11 HOH HOH . G 7 HOH A 4 504 105 HOH HOH . G 7 HOH A 5 505 126 HOH HOH . G 7 HOH A 6 506 22 HOH HOH . G 7 HOH A 7 507 91 HOH HOH . G 7 HOH A 8 508 138 HOH HOH . G 7 HOH A 9 509 87 HOH HOH . G 7 HOH A 10 510 35 HOH HOH . G 7 HOH A 11 511 68 HOH HOH . G 7 HOH A 12 512 114 HOH HOH . G 7 HOH A 13 513 7 HOH HOH . G 7 HOH A 14 514 205 HOH HOH . G 7 HOH A 15 515 48 HOH HOH . G 7 HOH A 16 516 16 HOH HOH . G 7 HOH A 17 517 127 HOH HOH . G 7 HOH A 18 518 73 HOH HOH . G 7 HOH A 19 519 209 HOH HOH . G 7 HOH A 20 520 33 HOH HOH . G 7 HOH A 21 521 60 HOH HOH . G 7 HOH A 22 522 92 HOH HOH . G 7 HOH A 23 523 119 HOH HOH . G 7 HOH A 24 524 128 HOH HOH . G 7 HOH A 25 525 80 HOH HOH . G 7 HOH A 26 526 28 HOH HOH . G 7 HOH A 27 527 149 HOH HOH . G 7 HOH A 28 528 65 HOH HOH . G 7 HOH A 29 529 75 HOH HOH . G 7 HOH A 30 530 55 HOH HOH . G 7 HOH A 31 531 74 HOH HOH . G 7 HOH A 32 532 102 HOH HOH . G 7 HOH A 33 533 131 HOH HOH . G 7 HOH A 34 534 83 HOH HOH . G 7 HOH A 35 535 208 HOH HOH . G 7 HOH A 36 536 162 HOH HOH . G 7 HOH A 37 537 4 HOH HOH . G 7 HOH A 38 538 211 HOH HOH . G 7 HOH A 39 539 67 HOH HOH . G 7 HOH A 40 540 41 HOH HOH . G 7 HOH A 41 541 3 HOH HOH . G 7 HOH A 42 542 15 HOH HOH . G 7 HOH A 43 543 17 HOH HOH . G 7 HOH A 44 544 223 HOH HOH . G 7 HOH A 45 545 34 HOH HOH . G 7 HOH A 46 546 222 HOH HOH . G 7 HOH A 47 547 116 HOH HOH . G 7 HOH A 48 548 21 HOH HOH . G 7 HOH A 49 549 69 HOH HOH . G 7 HOH A 50 550 24 HOH HOH . G 7 HOH A 51 551 9 HOH HOH . G 7 HOH A 52 552 30 HOH HOH . G 7 HOH A 53 553 181 HOH HOH . G 7 HOH A 54 554 23 HOH HOH . G 7 HOH A 55 555 182 HOH HOH . G 7 HOH A 56 556 93 HOH HOH . G 7 HOH A 57 557 192 HOH HOH . G 7 HOH A 58 558 90 HOH HOH . G 7 HOH A 59 559 1 HOH HOH . G 7 HOH A 60 560 121 HOH HOH . G 7 HOH A 61 561 112 HOH HOH . G 7 HOH A 62 562 20 HOH HOH . G 7 HOH A 63 563 94 HOH HOH . G 7 HOH A 64 564 49 HOH HOH . G 7 HOH A 65 565 135 HOH HOH . G 7 HOH A 66 566 224 HOH HOH . G 7 HOH A 67 567 70 HOH HOH . G 7 HOH A 68 568 125 HOH HOH . G 7 HOH A 69 569 85 HOH HOH . G 7 HOH A 70 570 155 HOH HOH . G 7 HOH A 71 571 168 HOH HOH . G 7 HOH A 72 572 152 HOH HOH . G 7 HOH A 73 573 77 HOH HOH . G 7 HOH A 74 574 176 HOH HOH . G 7 HOH A 75 575 32 HOH HOH . G 7 HOH A 76 576 82 HOH HOH . G 7 HOH A 77 577 31 HOH HOH . G 7 HOH A 78 578 37 HOH HOH . G 7 HOH A 79 579 44 HOH HOH . G 7 HOH A 80 580 132 HOH HOH . G 7 HOH A 81 581 86 HOH HOH . G 7 HOH A 82 582 38 HOH HOH . G 7 HOH A 83 583 212 HOH HOH . G 7 HOH A 84 584 88 HOH HOH . G 7 HOH A 85 585 53 HOH HOH . G 7 HOH A 86 586 129 HOH HOH . G 7 HOH A 87 587 174 HOH HOH . G 7 HOH A 88 588 193 HOH HOH . G 7 HOH A 89 589 107 HOH HOH . G 7 HOH A 90 590 43 HOH HOH . G 7 HOH A 91 591 216 HOH HOH . G 7 HOH A 92 592 156 HOH HOH . G 7 HOH A 93 593 213 HOH HOH . G 7 HOH A 94 594 134 HOH HOH . G 7 HOH A 95 595 18 HOH HOH . G 7 HOH A 96 596 110 HOH HOH . G 7 HOH A 97 597 84 HOH HOH . G 7 HOH A 98 598 79 HOH HOH . G 7 HOH A 99 599 36 HOH HOH . G 7 HOH A 100 600 6 HOH HOH . G 7 HOH A 101 601 115 HOH HOH . G 7 HOH A 102 602 72 HOH HOH . G 7 HOH A 103 603 198 HOH HOH . G 7 HOH A 104 604 201 HOH HOH . G 7 HOH A 105 605 5 HOH HOH . G 7 HOH A 106 606 220 HOH HOH . G 7 HOH A 107 607 200 HOH HOH . G 7 HOH A 108 608 45 HOH HOH . G 7 HOH A 109 609 113 HOH HOH . G 7 HOH A 110 610 81 HOH HOH . G 7 HOH A 111 611 109 HOH HOH . G 7 HOH A 112 612 123 HOH HOH . G 7 HOH A 113 613 203 HOH HOH . G 7 HOH A 114 614 71 HOH HOH . G 7 HOH A 115 615 58 HOH HOH . G 7 HOH A 116 616 175 HOH HOH . G 7 HOH A 117 617 206 HOH HOH . G 7 HOH A 118 618 97 HOH HOH . G 7 HOH A 119 619 106 HOH HOH . G 7 HOH A 120 620 40 HOH HOH . G 7 HOH A 121 621 130 HOH HOH . G 7 HOH A 122 622 27 HOH HOH . G 7 HOH A 123 623 64 HOH HOH . G 7 HOH A 124 624 187 HOH HOH . G 7 HOH A 125 625 8 HOH HOH . G 7 HOH A 126 626 29 HOH HOH . G 7 HOH A 127 627 56 HOH HOH . G 7 HOH A 128 628 221 HOH HOH . G 7 HOH A 129 629 96 HOH HOH . G 7 HOH A 130 630 210 HOH HOH . G 7 HOH A 131 631 148 HOH HOH . G 7 HOH A 132 632 166 HOH HOH . G 7 HOH A 133 633 95 HOH HOH . G 7 HOH A 134 634 214 HOH HOH . G 7 HOH A 135 635 2 HOH HOH . G 7 HOH A 136 636 39 HOH HOH . G 7 HOH A 137 637 89 HOH HOH . G 7 HOH A 138 638 12 HOH HOH . G 7 HOH A 139 639 177 HOH HOH . G 7 HOH A 140 640 217 HOH HOH . G 7 HOH A 141 641 160 HOH HOH . G 7 HOH A 142 642 103 HOH HOH . G 7 HOH A 143 643 66 HOH HOH . G 7 HOH A 144 644 61 HOH HOH . G 7 HOH A 145 645 178 HOH HOH . G 7 HOH A 146 646 207 HOH HOH . G 7 HOH A 147 647 153 HOH HOH . G 7 HOH A 148 648 98 HOH HOH . G 7 HOH A 149 649 154 HOH HOH . G 7 HOH A 150 650 133 HOH HOH . G 7 HOH A 151 651 139 HOH HOH . G 7 HOH A 152 652 117 HOH HOH . G 7 HOH A 153 653 124 HOH HOH . G 7 HOH A 154 654 150 HOH HOH . G 7 HOH A 155 655 104 HOH HOH . G 7 HOH A 156 656 219 HOH HOH . G 7 HOH A 157 657 122 HOH HOH . G 7 HOH A 158 658 141 HOH HOH . G 7 HOH A 159 659 179 HOH HOH . G 7 HOH A 160 660 196 HOH HOH . G 7 HOH A 161 661 47 HOH HOH . G 7 HOH A 162 662 54 HOH HOH . G 7 HOH A 163 663 76 HOH HOH . G 7 HOH A 164 664 14 HOH HOH . G 7 HOH A 165 665 169 HOH HOH . G 7 HOH A 166 666 151 HOH HOH . G 7 HOH A 167 667 13 HOH HOH . G 7 HOH A 168 668 164 HOH HOH . G 7 HOH A 169 669 147 HOH HOH . G 7 HOH A 170 670 158 HOH HOH . G 7 HOH A 171 671 108 HOH HOH . G 7 HOH A 172 672 145 HOH HOH . G 7 HOH A 173 673 78 HOH HOH . G 7 HOH A 174 674 183 HOH HOH . G 7 HOH A 175 675 26 HOH HOH . G 7 HOH A 176 676 195 HOH HOH . G 7 HOH A 177 677 171 HOH HOH . G 7 HOH A 178 678 165 HOH HOH . G 7 HOH A 179 679 137 HOH HOH . G 7 HOH A 180 680 144 HOH HOH . G 7 HOH A 181 681 167 HOH HOH . G 7 HOH A 182 682 50 HOH HOH . G 7 HOH A 183 683 57 HOH HOH . G 7 HOH A 184 684 142 HOH HOH . G 7 HOH A 185 685 170 HOH HOH . G 7 HOH A 186 686 159 HOH HOH . G 7 HOH A 187 687 191 HOH HOH . G 7 HOH A 188 688 101 HOH HOH . G 7 HOH A 189 689 199 HOH HOH . G 7 HOH A 190 690 173 HOH HOH . G 7 HOH A 191 691 99 HOH HOH . G 7 HOH A 192 692 194 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x -31.808 _atom_site.Cartn_y -13.989 _atom_site.Cartn_z 13.567 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.55 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 405 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #