data_5MLZ # _model_server_result.job_id oR_HYTAmXuWbdXf-ih9nSA _model_server_result.datetime_utc '2024-12-21 17:00:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mlz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5MLZ # _exptl.entry_id 5MLZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MLZ _cell.length_a 90.87 _cell.length_b 146.21 _cell.length_c 95.35 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 113 A ASP 91 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc2 A OE1 GLN 115 A GLN 93 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc3 B O2B GDP . A GDP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc4 B O2A GDP . A GDP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5MLZ _atom_sites.fract_transf_matrix[1][1] 0.011005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010488 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 401 500 GDP GDP . C 3 MG A 1 402 501 MG MG . D 4 CL A 1 403 502 CL CL . E 5 LDA A 1 404 600 LDA LDA . F 5 LDA A 1 405 601 LDA LDA . G 5 LDA A 1 406 602 LDA LDA . H 5 LDA A 1 407 603 LDA LDA . I 5 LDA A 1 408 604 LDA LDA . J 5 LDA A 1 409 605 LDA LDA . K 5 LDA A 1 410 606 LDA LDA . L 6 HOH A 1 501 1028 HOH HOH . L 6 HOH A 2 502 1045 HOH HOH . L 6 HOH A 3 503 1008 HOH HOH . L 6 HOH A 4 504 1042 HOH HOH . L 6 HOH A 5 505 1032 HOH HOH . L 6 HOH A 6 506 1020 HOH HOH . L 6 HOH A 7 507 1005 HOH HOH . L 6 HOH A 8 508 1040 HOH HOH . L 6 HOH A 9 509 1050 HOH HOH . L 6 HOH A 10 510 1003 HOH HOH . L 6 HOH A 11 511 1011 HOH HOH . L 6 HOH A 12 512 1022 HOH HOH . L 6 HOH A 13 513 1026 HOH HOH . L 6 HOH A 14 514 1010 HOH HOH . L 6 HOH A 15 515 1047 HOH HOH . L 6 HOH A 16 516 1004 HOH HOH . L 6 HOH A 17 517 1033 HOH HOH . L 6 HOH A 18 518 1015 HOH HOH . L 6 HOH A 19 519 1021 HOH HOH . L 6 HOH A 20 520 1024 HOH HOH . L 6 HOH A 21 521 1036 HOH HOH . L 6 HOH A 22 522 1038 HOH HOH . L 6 HOH A 23 523 1014 HOH HOH . L 6 HOH A 24 524 1037 HOH HOH . L 6 HOH A 25 525 1056 HOH HOH . L 6 HOH A 26 526 1013 HOH HOH . L 6 HOH A 27 527 1049 HOH HOH . L 6 HOH A 28 528 1029 HOH HOH . L 6 HOH A 29 529 1027 HOH HOH . L 6 HOH A 30 530 1006 HOH HOH . L 6 HOH A 31 531 1044 HOH HOH . L 6 HOH A 32 532 1019 HOH HOH . L 6 HOH A 33 533 1043 HOH HOH . L 6 HOH A 34 534 1051 HOH HOH . L 6 HOH A 35 535 1002 HOH HOH . L 6 HOH A 36 536 1046 HOH HOH . L 6 HOH A 37 537 1007 HOH HOH . L 6 HOH A 38 538 1039 HOH HOH . L 6 HOH A 39 539 1023 HOH HOH . L 6 HOH A 40 540 1031 HOH HOH . L 6 HOH A 41 541 1012 HOH HOH . L 6 HOH A 42 542 1017 HOH HOH . L 6 HOH A 43 543 1025 HOH HOH . L 6 HOH A 44 544 1041 HOH HOH . L 6 HOH A 45 545 1009 HOH HOH . L 6 HOH A 46 546 1001 HOH HOH . L 6 HOH A 47 547 1053 HOH HOH . L 6 HOH A 48 548 1035 HOH HOH . L 6 HOH A 49 549 1048 HOH HOH . L 6 HOH A 50 550 1057 HOH HOH . L 6 HOH A 51 551 1055 HOH HOH . L 6 HOH A 52 552 1018 HOH HOH . L 6 HOH A 53 553 1058 HOH HOH . L 6 HOH A 54 554 1054 HOH HOH . L 6 HOH A 55 555 1034 HOH HOH . L 6 HOH A 56 556 1030 HOH HOH . L 6 HOH A 57 557 1016 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 0.315 _atom_site.Cartn_y 21.206 _atom_site.Cartn_z 0.831 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 59.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #