data_5MMN # _model_server_result.job_id vUrLUoW0fzLpIQEnHDi1SQ _model_server_result.datetime_utc '2024-10-13 00:19:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mmn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5MMN # _exptl.entry_id 5MMN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 320.388 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-ethyl-3-[8-methyl-5-(2-methylpyridin-4-yl)isoquinolin-3-yl]urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5MMN _cell.length_a 71.52 _cell.length_b 71.52 _cell.length_c 78.95 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H20 N4 O' _chem_comp.formula_weight 320.388 _chem_comp.id O54 _chem_comp.mon_nstd_flag . _chem_comp.name 1-ethyl-3-[8-methyl-5-(2-methylpyridin-4-yl)isoquinolin-3-yl]urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C14 O54 sing 237 n n C10 N7 O54 doub 238 n y C10 C12 O54 sing 239 n y N7 C5 O54 sing 240 n y N3 C5 O54 sing 241 n n N3 C2 O54 sing 242 n n C14 C12 O54 doub 243 n y C14 C17 O54 sing 244 n y C12 C11 O54 sing 245 n y C5 C8 O54 doub 246 n y C9 C6 O54 sing 247 n n N4 C2 O54 sing 248 n n N4 C6 O54 sing 249 n n C2 O1 O54 doub 250 n n C17 C16 O54 doub 251 n y C8 C11 O54 sing 252 n y C11 C13 O54 doub 253 n y C16 C13 O54 sing 254 n y C13 C15 O54 sing 255 n n C15 C20 O54 doub 256 n y C15 C19 O54 sing 257 n y C20 C22 O54 sing 258 n y C19 C21 O54 doub 259 n y C22 N23 O54 doub 260 n y C21 N23 O54 sing 261 n y C21 C24 O54 sing 262 n n N4 H1 O54 sing 263 n n C6 H2 O54 sing 264 n n C6 H3 O54 sing 265 n n C9 H4 O54 sing 266 n n C9 H5 O54 sing 267 n n C9 H6 O54 sing 268 n n N3 H7 O54 sing 269 n n C8 H8 O54 sing 270 n n C16 H9 O54 sing 271 n n C17 H10 O54 sing 272 n n C18 H11 O54 sing 273 n n C18 H12 O54 sing 274 n n C18 H13 O54 sing 275 n n C10 H14 O54 sing 276 n n C20 H15 O54 sing 277 n n C22 H16 O54 sing 278 n n C24 H17 O54 sing 279 n n C24 H18 O54 sing 280 n n C24 H19 O54 sing 281 n n C19 H20 O54 sing 282 n n # _atom_sites.entry_id 5MMN _atom_sites.fract_transf_matrix[1][1] 0.013982 _atom_sites.fract_transf_matrix[1][2] 0.008073 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016145 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 O54 A 1 301 251 O54 ACT . C 3 HOH A 1 401 538 HOH HOH . C 3 HOH A 2 402 511 HOH HOH . C 3 HOH A 3 403 483 HOH HOH . C 3 HOH A 4 404 512 HOH HOH . C 3 HOH A 5 405 463 HOH HOH . C 3 HOH A 6 406 548 HOH HOH . C 3 HOH A 7 407 551 HOH HOH . C 3 HOH A 8 408 515 HOH HOH . C 3 HOH A 9 409 467 HOH HOH . C 3 HOH A 10 410 504 HOH HOH . C 3 HOH A 11 411 528 HOH HOH . C 3 HOH A 12 412 476 HOH HOH . C 3 HOH A 13 413 471 HOH HOH . C 3 HOH A 14 414 500 HOH HOH . C 3 HOH A 15 415 478 HOH HOH . C 3 HOH A 16 416 513 HOH HOH . C 3 HOH A 17 417 453 HOH HOH . C 3 HOH A 18 418 484 HOH HOH . C 3 HOH A 19 419 472 HOH HOH . C 3 HOH A 20 420 520 HOH HOH . C 3 HOH A 21 421 508 HOH HOH . C 3 HOH A 22 422 557 HOH HOH . C 3 HOH A 23 423 481 HOH HOH . C 3 HOH A 24 424 452 HOH HOH . C 3 HOH A 25 425 514 HOH HOH . C 3 HOH A 26 426 465 HOH HOH . C 3 HOH A 27 427 482 HOH HOH . C 3 HOH A 28 428 552 HOH HOH . C 3 HOH A 29 429 489 HOH HOH . C 3 HOH A 30 430 490 HOH HOH . C 3 HOH A 31 431 459 HOH HOH . C 3 HOH A 32 432 501 HOH HOH . C 3 HOH A 33 433 479 HOH HOH . C 3 HOH A 34 434 536 HOH HOH . C 3 HOH A 35 435 455 HOH HOH . C 3 HOH A 36 436 469 HOH HOH . C 3 HOH A 37 437 475 HOH HOH . C 3 HOH A 38 438 503 HOH HOH . C 3 HOH A 39 439 522 HOH HOH . C 3 HOH A 40 440 464 HOH HOH . C 3 HOH A 41 441 516 HOH HOH . C 3 HOH A 42 442 521 HOH HOH . C 3 HOH A 43 443 532 HOH HOH . C 3 HOH A 44 444 491 HOH HOH . C 3 HOH A 45 445 494 HOH HOH . C 3 HOH A 46 446 499 HOH HOH . C 3 HOH A 47 447 488 HOH HOH . C 3 HOH A 48 448 466 HOH HOH . C 3 HOH A 49 449 485 HOH HOH . C 3 HOH A 50 450 540 HOH HOH . C 3 HOH A 51 451 454 HOH HOH . C 3 HOH A 52 452 517 HOH HOH . C 3 HOH A 53 453 451 HOH HOH . C 3 HOH A 54 454 480 HOH HOH . C 3 HOH A 55 455 526 HOH HOH . C 3 HOH A 56 456 486 HOH HOH . C 3 HOH A 57 457 537 HOH HOH . C 3 HOH A 58 458 561 HOH HOH . C 3 HOH A 59 459 529 HOH HOH . C 3 HOH A 60 460 477 HOH HOH . C 3 HOH A 61 461 519 HOH HOH . C 3 HOH A 62 462 554 HOH HOH . C 3 HOH A 63 463 527 HOH HOH . C 3 HOH A 64 464 495 HOH HOH . C 3 HOH A 65 465 523 HOH HOH . C 3 HOH A 66 466 470 HOH HOH . C 3 HOH A 67 467 474 HOH HOH . C 3 HOH A 68 468 460 HOH HOH . C 3 HOH A 69 469 541 HOH HOH . C 3 HOH A 70 470 497 HOH HOH . C 3 HOH A 71 471 461 HOH HOH . C 3 HOH A 72 472 510 HOH HOH . C 3 HOH A 73 473 462 HOH HOH . C 3 HOH A 74 474 544 HOH HOH . C 3 HOH A 75 475 524 HOH HOH . C 3 HOH A 76 476 458 HOH HOH . C 3 HOH A 77 477 505 HOH HOH . C 3 HOH A 78 478 506 HOH HOH . C 3 HOH A 79 479 487 HOH HOH . C 3 HOH A 80 480 498 HOH HOH . C 3 HOH A 81 481 496 HOH HOH . C 3 HOH A 82 482 456 HOH HOH . C 3 HOH A 83 483 556 HOH HOH . C 3 HOH A 84 484 560 HOH HOH . C 3 HOH A 85 485 492 HOH HOH . C 3 HOH A 86 486 468 HOH HOH . C 3 HOH A 87 487 509 HOH HOH . C 3 HOH A 88 488 533 HOH HOH . C 3 HOH A 89 489 457 HOH HOH . C 3 HOH A 90 490 542 HOH HOH . C 3 HOH A 91 491 502 HOH HOH . C 3 HOH A 92 492 543 HOH HOH . C 3 HOH A 93 493 553 HOH HOH . C 3 HOH A 94 494 507 HOH HOH . C 3 HOH A 95 495 546 HOH HOH . C 3 HOH A 96 496 550 HOH HOH . C 3 HOH A 97 497 493 HOH HOH . C 3 HOH A 98 498 545 HOH HOH . C 3 HOH A 99 499 525 HOH HOH . C 3 HOH A 100 500 518 HOH HOH . C 3 HOH A 101 501 549 HOH HOH . C 3 HOH A 102 502 555 HOH HOH . C 3 HOH A 103 503 534 HOH HOH . C 3 HOH A 104 504 558 HOH HOH . C 3 HOH A 105 505 473 HOH HOH . C 3 HOH A 106 506 547 HOH HOH . C 3 HOH A 107 507 535 HOH HOH . C 3 HOH A 108 508 559 HOH HOH . C 3 HOH A 109 509 530 HOH HOH . C 3 HOH A 110 510 531 HOH HOH . C 3 HOH A 111 511 539 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 O54 . . . B 2 -45.573 5.166 4.837 1 17.78 ? O1 O54 301 A 1 HETATM 2 C C2 O54 . . . B 2 -45.136 4.991 3.689 1 18.02 ? C2 O54 301 A 1 HETATM 3 N N4 O54 . . . B 2 -44.052 5.652 3.285 1 17.34 ? N4 O54 301 A 1 HETATM 4 C C6 O54 . . . B 2 -43.394 6.648 4.131 1 16.33 ? C6 O54 301 A 1 HETATM 5 C C9 O54 . . . B 2 -42.865 7.746 3.256 1 16.83 ? C9 O54 301 A 1 HETATM 6 N N3 O54 . . . B 2 -45.627 4.126 2.79 1 17.64 ? N3 O54 301 A 1 HETATM 7 C C5 O54 . . . B 2 -46.797 3.394 2.902 1 18.64 ? C5 O54 301 A 1 HETATM 8 C C8 O54 . . . B 2 -47.489 3.168 4.092 1 18.14 ? C8 O54 301 A 1 HETATM 9 C C11 O54 . . . B 2 -48.734 2.481 4.095 1 20.66 ? C11 O54 301 A 1 HETATM 10 C C13 O54 . . . B 2 -49.45 2.224 5.279 1 21.39 ? C13 O54 301 A 1 HETATM 11 C C16 O54 . . . B 2 -50.66 1.537 5.217 1 21.5 ? C16 O54 301 A 1 HETATM 12 C C17 O54 . . . B 2 -51.173 1.13 3.992 1 22.37 ? C17 O54 301 A 1 HETATM 13 C C14 O54 . . . B 2 -50.469 1.391 2.801 1 22.74 ? C14 O54 301 A 1 HETATM 14 C C18 O54 . . . B 2 -51.086 0.918 1.5 1 22.08 ? C18 O54 301 A 1 HETATM 15 C C12 O54 . . . B 2 -49.25 2.082 2.853 1 20.03 ? C12 O54 301 A 1 HETATM 16 C C10 O54 . . . B 2 -48.505 2.368 1.675 1 20.5 ? C10 O54 301 A 1 HETATM 17 N N7 O54 . . . B 2 -47.318 3.026 1.715 1 18.38 ? N7 O54 301 A 1 HETATM 18 C C15 O54 . . . B 2 -48.97 2.63 6.638 1 23.81 ? C15 O54 301 A 1 HETATM 19 C C20 O54 . . . B 2 -48.369 3.873 6.903 1 22.23 ? C20 O54 301 A 1 HETATM 20 C C22 O54 . . . B 2 -47.939 4.168 8.186 1 21.7 ? C22 O54 301 A 1 HETATM 21 N N23 O54 . . . B 2 -48.123 3.285 9.192 1 24.57 ? N23 O54 301 A 1 HETATM 22 C C21 O54 . . . B 2 -48.692 2.09 8.984 1 26.59 ? C21 O54 301 A 1 HETATM 23 C C24 O54 . . . B 2 -48.872 1.12 10.13 1 31.32 ? C24 O54 301 A 1 HETATM 24 C C19 O54 . . . B 2 -49.133 1.745 7.716 1 25.96 ? C19 O54 301 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #