data_5MN0
#
_model_server_result.job_id            FBlhgYZELwKy9pKqXvOcfg 
_model_server_result.datetime_utc      '2024-11-30 04:55:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mn0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    5MN0 
#
_exptl.entry_id    5MN0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MN0 
_cell.length_a            42.778 
_cell.length_b            62.679 
_cell.length_c            187.917 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MN0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OD1 ASP 65 B ASP 243 1_555 F MN MN . B MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc2 B OD2 ASP 65 B ASP 243 1_555 G MN MN . B MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc3 B O GLY 66 B GLY 244 1_555 F MN MN . B MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc4 B O GLY 223 B GLY 401 1_555 E MN MN . B MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? 
metalc ? metalc5 B OD1 ASP 254 B ASP 432 1_555 G MN MN . B MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc6 B OD2 ASP 314 B ASP 492 1_555 G MN MN . B MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc7 F MN MN . B MN 603 1_555 O O HOH . B HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc8 F MN MN . B MN 603 1_555 O O HOH . B HOH 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc9 F MN MN . B MN 603 1_555 O O HOH . B HOH 767 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc10 F MN MN . B MN 603 1_555 O O HOH . B HOH 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? 
metalc ? metalc11 G MN MN . B MN 604 1_555 O O HOH . B HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc12 G MN MN . B MN 604 1_555 O O HOH . B HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc13 G MN MN . B MN 604 1_555 O O HOH . B HOH 735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 168 n n 
C1 C2 GOL sing 169 n n 
C1 H11 GOL sing 170 n n 
C1 H12 GOL sing 171 n n 
O1 HO1 GOL sing 172 n n 
C2 O2 GOL sing 173 n n 
C2 C3 GOL sing 174 n n 
C2 H2 GOL sing 175 n n 
O2 HO2 GOL sing 176 n n 
C3 O3 GOL sing 177 n n 
C3 H31 GOL sing 178 n n 
C3 H32 GOL sing 179 n n 
O3 HO3 GOL sing 180 n n 
#
_atom_sites.entry_id                     5MN0 
_atom_sites.fract_transf_matrix[1][1]    0.023377 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015954 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005321 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 A8S A 1 301 1 A8S A8S . 
D 4 GOL B 1 601 1 GOL GOL . 
E 5 MN B 1 602 1 MN MN . 
F 5 MN B 1 603 2 MN MN . 
G 5 MN B 1 604 3 MN MN . 
H 6 CL B 1 605 1 CL CL . 
I 6 CL B 1 606 2 CL CL . 
J 6 CL B 1 607 3 CL CL . 
K 6 CL B 1 608 4 CL CL . 
L 6 CL B 1 609 5 CL CL . 
M 6 CL B 1 610 6 CL CL . 
N 7 HOH A 1 401 75 HOH HOH . 
N 7 HOH A 2 402 90 HOH HOH . 
N 7 HOH A 3 403 91 HOH HOH . 
N 7 HOH A 4 404 106 HOH HOH . 
N 7 HOH A 5 405 79 HOH HOH . 
N 7 HOH A 6 406 19 HOH HOH . 
N 7 HOH A 7 407 69 HOH HOH . 
N 7 HOH A 8 408 30 HOH HOH . 
N 7 HOH A 9 409 102 HOH HOH . 
N 7 HOH A 10 410 74 HOH HOH . 
N 7 HOH A 11 411 121 HOH HOH . 
N 7 HOH A 12 412 46 HOH HOH . 
N 7 HOH A 13 413 116 HOH HOH . 
N 7 HOH A 14 414 23 HOH HOH . 
N 7 HOH A 15 415 86 HOH HOH . 
N 7 HOH A 16 416 82 HOH HOH . 
N 7 HOH A 17 417 17 HOH HOH . 
N 7 HOH A 18 418 62 HOH HOH . 
N 7 HOH A 19 419 84 HOH HOH . 
N 7 HOH A 20 420 48 HOH HOH . 
N 7 HOH A 21 421 27 HOH HOH . 
N 7 HOH A 22 422 57 HOH HOH . 
N 7 HOH A 23 423 11 HOH HOH . 
N 7 HOH A 24 424 26 HOH HOH . 
N 7 HOH A 25 425 44 HOH HOH . 
N 7 HOH A 26 426 73 HOH HOH . 
N 7 HOH A 27 427 58 HOH HOH . 
N 7 HOH A 28 428 40 HOH HOH . 
N 7 HOH A 29 429 56 HOH HOH . 
N 7 HOH A 30 430 107 HOH HOH . 
N 7 HOH A 31 431 87 HOH HOH . 
N 7 HOH A 32 432 112 HOH HOH . 
N 7 HOH A 33 433 120 HOH HOH . 
N 7 HOH A 34 434 98 HOH HOH . 
N 7 HOH A 35 435 95 HOH HOH . 
N 7 HOH A 36 436 119 HOH HOH . 
N 7 HOH A 37 437 105 HOH HOH . 
N 7 HOH A 38 438 85 HOH HOH . 
O 7 HOH B 1 701 92 HOH HOH . 
O 7 HOH B 2 702 88 HOH HOH . 
O 7 HOH B 3 703 108 HOH HOH . 
O 7 HOH B 4 704 77 HOH HOH . 
O 7 HOH B 5 705 65 HOH HOH . 
O 7 HOH B 6 706 14 HOH HOH . 
O 7 HOH B 7 707 64 HOH HOH . 
O 7 HOH B 8 708 76 HOH HOH . 
O 7 HOH B 9 709 72 HOH HOH . 
O 7 HOH B 10 710 16 HOH HOH . 
O 7 HOH B 11 711 31 HOH HOH . 
O 7 HOH B 12 712 24 HOH HOH . 
O 7 HOH B 13 713 118 HOH HOH . 
O 7 HOH B 14 714 59 HOH HOH . 
O 7 HOH B 15 715 1 HOH HOH . 
O 7 HOH B 16 716 2 HOH HOH . 
O 7 HOH B 17 717 104 HOH HOH . 
O 7 HOH B 18 718 12 HOH HOH . 
O 7 HOH B 19 719 50 HOH HOH . 
O 7 HOH B 20 720 5 HOH HOH . 
O 7 HOH B 21 721 63 HOH HOH . 
O 7 HOH B 22 722 103 HOH HOH . 
O 7 HOH B 23 723 9 HOH HOH . 
O 7 HOH B 24 724 93 HOH HOH . 
O 7 HOH B 25 725 6 HOH HOH . 
O 7 HOH B 26 726 45 HOH HOH . 
O 7 HOH B 27 727 10 HOH HOH . 
O 7 HOH B 28 728 113 HOH HOH . 
O 7 HOH B 29 729 81 HOH HOH . 
O 7 HOH B 30 730 7 HOH HOH . 
O 7 HOH B 31 731 13 HOH HOH . 
O 7 HOH B 32 732 39 HOH HOH . 
O 7 HOH B 33 733 78 HOH HOH . 
O 7 HOH B 34 734 55 HOH HOH . 
O 7 HOH B 35 735 96 HOH HOH . 
O 7 HOH B 36 736 3 HOH HOH . 
O 7 HOH B 37 737 36 HOH HOH . 
O 7 HOH B 38 738 83 HOH HOH . 
O 7 HOH B 39 739 18 HOH HOH . 
O 7 HOH B 40 740 42 HOH HOH . 
O 7 HOH B 41 741 60 HOH HOH . 
O 7 HOH B 42 742 68 HOH HOH . 
O 7 HOH B 43 743 97 HOH HOH . 
O 7 HOH B 44 744 114 HOH HOH . 
O 7 HOH B 45 745 47 HOH HOH . 
O 7 HOH B 46 746 94 HOH HOH . 
O 7 HOH B 47 747 15 HOH HOH . 
O 7 HOH B 48 748 80 HOH HOH . 
O 7 HOH B 49 749 49 HOH HOH . 
O 7 HOH B 50 750 70 HOH HOH . 
O 7 HOH B 51 751 33 HOH HOH . 
O 7 HOH B 52 752 20 HOH HOH . 
O 7 HOH B 53 753 43 HOH HOH . 
O 7 HOH B 54 754 8 HOH HOH . 
O 7 HOH B 55 755 22 HOH HOH . 
O 7 HOH B 56 756 37 HOH HOH . 
O 7 HOH B 57 757 21 HOH HOH . 
O 7 HOH B 58 758 29 HOH HOH . 
O 7 HOH B 59 759 32 HOH HOH . 
O 7 HOH B 60 760 41 HOH HOH . 
O 7 HOH B 61 761 35 HOH HOH . 
O 7 HOH B 62 762 100 HOH HOH . 
O 7 HOH B 63 763 34 HOH HOH . 
O 7 HOH B 64 764 54 HOH HOH . 
O 7 HOH B 65 765 38 HOH HOH . 
O 7 HOH B 66 766 53 HOH HOH . 
O 7 HOH B 67 767 51 HOH HOH . 
O 7 HOH B 68 768 115 HOH HOH . 
O 7 HOH B 69 769 61 HOH HOH . 
O 7 HOH B 70 770 99 HOH HOH . 
O 7 HOH B 71 771 109 HOH HOH . 
O 7 HOH B 72 772 25 HOH HOH . 
O 7 HOH B 73 773 101 HOH HOH . 
O 7 HOH B 74 774 66 HOH HOH . 
O 7 HOH B 75 775 111 HOH HOH . 
O 7 HOH B 76 776 28 HOH HOH . 
O 7 HOH B 77 777 4 HOH HOH . 
O 7 HOH B 78 778 67 HOH HOH . 
O 7 HOH B 79 779 110 HOH HOH . 
O 7 HOH B 80 780 71 HOH HOH . 
O 7 HOH B 81 781 52 HOH HOH . 
O 7 HOH B 82 782 89 HOH HOH . 
O 7 HOH B 83 783 117 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -7.241 14.513 -7.534 1 92.33 ? C1 GOL 601 B 1 
HETATM 2 O O1 GOL . . . D 4 -8.148 14.031 -8.509 1 95.79 ? O1 GOL 601 B 1 
HETATM 3 C C2 GOL . . . D 4 -7.266 16.045 -7.433 1 87.7 ? C2 GOL 601 B 1 
HETATM 4 O O2 GOL . . . D 4 -6.661 16.628 -8.57 1 89.06 ? O2 GOL 601 B 1 
HETATM 5 C C3 GOL . . . D 4 -8.691 16.57 -7.284 1 78.48 ? C3 GOL 601 B 1 
HETATM 6 O O3 GOL . . . D 4 -9.193 16.237 -6.009 1 78.91 ? O3 GOL 601 B 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#