data_5MN0 # _model_server_result.job_id teZTT5RCsKVs1nGD1SINiA _model_server_result.datetime_utc '2024-11-08 22:29:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mn0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":602}' # _entry.id 5MN0 # _exptl.entry_id 5MN0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MN0 _cell.length_a 42.778 _cell.length_b 62.679 _cell.length_c 187.917 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MN0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 65 B ASP 243 1_555 F MN MN . B MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc2 B OD2 ASP 65 B ASP 243 1_555 G MN MN . B MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc3 B O GLY 66 B GLY 244 1_555 F MN MN . B MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 B O GLY 223 B GLY 401 1_555 E MN MN . B MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc5 B OD1 ASP 254 B ASP 432 1_555 G MN MN . B MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc6 B OD2 ASP 314 B ASP 492 1_555 G MN MN . B MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc7 F MN MN . B MN 603 1_555 O O HOH . B HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc8 F MN MN . B MN 603 1_555 O O HOH . B HOH 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc9 F MN MN . B MN 603 1_555 O O HOH . B HOH 767 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc10 F MN MN . B MN 603 1_555 O O HOH . B HOH 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc11 G MN MN . B MN 604 1_555 O O HOH . B HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc12 G MN MN . B MN 604 1_555 O O HOH . B HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc13 G MN MN . B MN 604 1_555 O O HOH . B HOH 735 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5MN0 _atom_sites.fract_transf_matrix[1][1] 0.023377 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015954 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 A8S A 1 301 1 A8S A8S . D 4 GOL B 1 601 1 GOL GOL . E 5 MN B 1 602 1 MN MN . F 5 MN B 1 603 2 MN MN . G 5 MN B 1 604 3 MN MN . H 6 CL B 1 605 1 CL CL . I 6 CL B 1 606 2 CL CL . J 6 CL B 1 607 3 CL CL . K 6 CL B 1 608 4 CL CL . L 6 CL B 1 609 5 CL CL . M 6 CL B 1 610 6 CL CL . N 7 HOH A 1 401 75 HOH HOH . N 7 HOH A 2 402 90 HOH HOH . N 7 HOH A 3 403 91 HOH HOH . N 7 HOH A 4 404 106 HOH HOH . N 7 HOH A 5 405 79 HOH HOH . N 7 HOH A 6 406 19 HOH HOH . N 7 HOH A 7 407 69 HOH HOH . N 7 HOH A 8 408 30 HOH HOH . N 7 HOH A 9 409 102 HOH HOH . N 7 HOH A 10 410 74 HOH HOH . N 7 HOH A 11 411 121 HOH HOH . N 7 HOH A 12 412 46 HOH HOH . N 7 HOH A 13 413 116 HOH HOH . N 7 HOH A 14 414 23 HOH HOH . N 7 HOH A 15 415 86 HOH HOH . N 7 HOH A 16 416 82 HOH HOH . N 7 HOH A 17 417 17 HOH HOH . N 7 HOH A 18 418 62 HOH HOH . N 7 HOH A 19 419 84 HOH HOH . N 7 HOH A 20 420 48 HOH HOH . N 7 HOH A 21 421 27 HOH HOH . N 7 HOH A 22 422 57 HOH HOH . N 7 HOH A 23 423 11 HOH HOH . N 7 HOH A 24 424 26 HOH HOH . N 7 HOH A 25 425 44 HOH HOH . N 7 HOH A 26 426 73 HOH HOH . N 7 HOH A 27 427 58 HOH HOH . N 7 HOH A 28 428 40 HOH HOH . N 7 HOH A 29 429 56 HOH HOH . N 7 HOH A 30 430 107 HOH HOH . N 7 HOH A 31 431 87 HOH HOH . N 7 HOH A 32 432 112 HOH HOH . N 7 HOH A 33 433 120 HOH HOH . N 7 HOH A 34 434 98 HOH HOH . N 7 HOH A 35 435 95 HOH HOH . N 7 HOH A 36 436 119 HOH HOH . N 7 HOH A 37 437 105 HOH HOH . N 7 HOH A 38 438 85 HOH HOH . O 7 HOH B 1 701 92 HOH HOH . O 7 HOH B 2 702 88 HOH HOH . O 7 HOH B 3 703 108 HOH HOH . O 7 HOH B 4 704 77 HOH HOH . O 7 HOH B 5 705 65 HOH HOH . O 7 HOH B 6 706 14 HOH HOH . O 7 HOH B 7 707 64 HOH HOH . O 7 HOH B 8 708 76 HOH HOH . O 7 HOH B 9 709 72 HOH HOH . O 7 HOH B 10 710 16 HOH HOH . O 7 HOH B 11 711 31 HOH HOH . O 7 HOH B 12 712 24 HOH HOH . O 7 HOH B 13 713 118 HOH HOH . O 7 HOH B 14 714 59 HOH HOH . O 7 HOH B 15 715 1 HOH HOH . O 7 HOH B 16 716 2 HOH HOH . O 7 HOH B 17 717 104 HOH HOH . O 7 HOH B 18 718 12 HOH HOH . O 7 HOH B 19 719 50 HOH HOH . O 7 HOH B 20 720 5 HOH HOH . O 7 HOH B 21 721 63 HOH HOH . O 7 HOH B 22 722 103 HOH HOH . O 7 HOH B 23 723 9 HOH HOH . O 7 HOH B 24 724 93 HOH HOH . O 7 HOH B 25 725 6 HOH HOH . O 7 HOH B 26 726 45 HOH HOH . O 7 HOH B 27 727 10 HOH HOH . O 7 HOH B 28 728 113 HOH HOH . O 7 HOH B 29 729 81 HOH HOH . O 7 HOH B 30 730 7 HOH HOH . O 7 HOH B 31 731 13 HOH HOH . O 7 HOH B 32 732 39 HOH HOH . O 7 HOH B 33 733 78 HOH HOH . O 7 HOH B 34 734 55 HOH HOH . O 7 HOH B 35 735 96 HOH HOH . O 7 HOH B 36 736 3 HOH HOH . O 7 HOH B 37 737 36 HOH HOH . O 7 HOH B 38 738 83 HOH HOH . O 7 HOH B 39 739 18 HOH HOH . O 7 HOH B 40 740 42 HOH HOH . O 7 HOH B 41 741 60 HOH HOH . O 7 HOH B 42 742 68 HOH HOH . O 7 HOH B 43 743 97 HOH HOH . O 7 HOH B 44 744 114 HOH HOH . O 7 HOH B 45 745 47 HOH HOH . O 7 HOH B 46 746 94 HOH HOH . O 7 HOH B 47 747 15 HOH HOH . O 7 HOH B 48 748 80 HOH HOH . O 7 HOH B 49 749 49 HOH HOH . O 7 HOH B 50 750 70 HOH HOH . O 7 HOH B 51 751 33 HOH HOH . O 7 HOH B 52 752 20 HOH HOH . O 7 HOH B 53 753 43 HOH HOH . O 7 HOH B 54 754 8 HOH HOH . O 7 HOH B 55 755 22 HOH HOH . O 7 HOH B 56 756 37 HOH HOH . O 7 HOH B 57 757 21 HOH HOH . O 7 HOH B 58 758 29 HOH HOH . O 7 HOH B 59 759 32 HOH HOH . O 7 HOH B 60 760 41 HOH HOH . O 7 HOH B 61 761 35 HOH HOH . O 7 HOH B 62 762 100 HOH HOH . O 7 HOH B 63 763 34 HOH HOH . O 7 HOH B 64 764 54 HOH HOH . O 7 HOH B 65 765 38 HOH HOH . O 7 HOH B 66 766 53 HOH HOH . O 7 HOH B 67 767 51 HOH HOH . O 7 HOH B 68 768 115 HOH HOH . O 7 HOH B 69 769 61 HOH HOH . O 7 HOH B 70 770 99 HOH HOH . O 7 HOH B 71 771 109 HOH HOH . O 7 HOH B 72 772 25 HOH HOH . O 7 HOH B 73 773 101 HOH HOH . O 7 HOH B 74 774 66 HOH HOH . O 7 HOH B 75 775 111 HOH HOH . O 7 HOH B 76 776 28 HOH HOH . O 7 HOH B 77 777 4 HOH HOH . O 7 HOH B 78 778 67 HOH HOH . O 7 HOH B 79 779 110 HOH HOH . O 7 HOH B 80 780 71 HOH HOH . O 7 HOH B 81 781 52 HOH HOH . O 7 HOH B 82 782 89 HOH HOH . O 7 HOH B 83 783 117 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 0.12 _atom_site.Cartn_y 27.409 _atom_site.Cartn_z 26.977 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 163.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #