data_5MNP # _model_server_result.job_id KyM1ojo3oYbZooHHafj8kQ _model_server_result.datetime_utc '2024-11-14 06:28:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mnp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5MNP # _exptl.entry_id 5MNP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MNP _cell.length_a 54.921 _cell.length_b 58.623 _cell.length_c 67.731 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc5 B CA CA . A CA 301 1_555 G O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc6 B CA CA . A CA 301 1_555 G O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5MNP _atom_sites.fract_transf_matrix[1][1] 0.018208 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017058 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 3 SO4 A 1 304 3 SO4 SO4 . F 4 MRZ A 1 305 1 MRZ PIZ . G 5 HOH A 1 401 122 HOH HOH . G 5 HOH A 2 402 70 HOH HOH . G 5 HOH A 3 403 146 HOH HOH . G 5 HOH A 4 404 37 HOH HOH . G 5 HOH A 5 405 132 HOH HOH . G 5 HOH A 6 406 76 HOH HOH . G 5 HOH A 7 407 113 HOH HOH . G 5 HOH A 8 408 172 HOH HOH . G 5 HOH A 9 409 58 HOH HOH . G 5 HOH A 10 410 176 HOH HOH . G 5 HOH A 11 411 97 HOH HOH . G 5 HOH A 12 412 52 HOH HOH . G 5 HOH A 13 413 71 HOH HOH . G 5 HOH A 14 414 7 HOH HOH . G 5 HOH A 15 415 145 HOH HOH . G 5 HOH A 16 416 77 HOH HOH . G 5 HOH A 17 417 120 HOH HOH . G 5 HOH A 18 418 140 HOH HOH . G 5 HOH A 19 419 164 HOH HOH . G 5 HOH A 20 420 110 HOH HOH . G 5 HOH A 21 421 45 HOH HOH . G 5 HOH A 22 422 46 HOH HOH . G 5 HOH A 23 423 135 HOH HOH . G 5 HOH A 24 424 124 HOH HOH . G 5 HOH A 25 425 177 HOH HOH . G 5 HOH A 26 426 72 HOH HOH . G 5 HOH A 27 427 33 HOH HOH . G 5 HOH A 28 428 49 HOH HOH . G 5 HOH A 29 429 30 HOH HOH . G 5 HOH A 30 430 27 HOH HOH . G 5 HOH A 31 431 54 HOH HOH . G 5 HOH A 32 432 149 HOH HOH . G 5 HOH A 33 433 141 HOH HOH . G 5 HOH A 34 434 100 HOH HOH . G 5 HOH A 35 435 175 HOH HOH . G 5 HOH A 36 436 21 HOH HOH . G 5 HOH A 37 437 68 HOH HOH . G 5 HOH A 38 438 105 HOH HOH . G 5 HOH A 39 439 41 HOH HOH . G 5 HOH A 40 440 90 HOH HOH . G 5 HOH A 41 441 142 HOH HOH . G 5 HOH A 42 442 173 HOH HOH . G 5 HOH A 43 443 174 HOH HOH . G 5 HOH A 44 444 161 HOH HOH . G 5 HOH A 45 445 103 HOH HOH . G 5 HOH A 46 446 170 HOH HOH . G 5 HOH A 47 447 118 HOH HOH . G 5 HOH A 48 448 55 HOH HOH . G 5 HOH A 49 449 107 HOH HOH . G 5 HOH A 50 450 130 HOH HOH . G 5 HOH A 51 451 180 HOH HOH . G 5 HOH A 52 452 178 HOH HOH . G 5 HOH A 53 453 115 HOH HOH . G 5 HOH A 54 454 39 HOH HOH . G 5 HOH A 55 455 11 HOH HOH . G 5 HOH A 56 456 14 HOH HOH . G 5 HOH A 57 457 9 HOH HOH . G 5 HOH A 58 458 150 HOH HOH . G 5 HOH A 59 459 144 HOH HOH . G 5 HOH A 60 460 119 HOH HOH . G 5 HOH A 61 461 44 HOH HOH . G 5 HOH A 62 462 31 HOH HOH . G 5 HOH A 63 463 143 HOH HOH . G 5 HOH A 64 464 29 HOH HOH . G 5 HOH A 65 465 35 HOH HOH . G 5 HOH A 66 466 34 HOH HOH . G 5 HOH A 67 467 148 HOH HOH . G 5 HOH A 68 468 42 HOH HOH . G 5 HOH A 69 469 126 HOH HOH . G 5 HOH A 70 470 38 HOH HOH . G 5 HOH A 71 471 65 HOH HOH . G 5 HOH A 72 472 18 HOH HOH . G 5 HOH A 73 473 10 HOH HOH . G 5 HOH A 74 474 40 HOH HOH . G 5 HOH A 75 475 15 HOH HOH . G 5 HOH A 76 476 179 HOH HOH . G 5 HOH A 77 477 48 HOH HOH . G 5 HOH A 78 478 171 HOH HOH . G 5 HOH A 79 479 17 HOH HOH . G 5 HOH A 80 480 136 HOH HOH . G 5 HOH A 81 481 139 HOH HOH . G 5 HOH A 82 482 152 HOH HOH . G 5 HOH A 83 483 62 HOH HOH . G 5 HOH A 84 484 73 HOH HOH . G 5 HOH A 85 485 109 HOH HOH . G 5 HOH A 86 486 67 HOH HOH . G 5 HOH A 87 487 96 HOH HOH . G 5 HOH A 88 488 36 HOH HOH . G 5 HOH A 89 489 82 HOH HOH . G 5 HOH A 90 490 61 HOH HOH . G 5 HOH A 91 491 106 HOH HOH . G 5 HOH A 92 492 53 HOH HOH . G 5 HOH A 93 493 64 HOH HOH . G 5 HOH A 94 494 20 HOH HOH . G 5 HOH A 95 495 43 HOH HOH . G 5 HOH A 96 496 87 HOH HOH . G 5 HOH A 97 497 74 HOH HOH . G 5 HOH A 98 498 22 HOH HOH . G 5 HOH A 99 499 25 HOH HOH . G 5 HOH A 100 500 80 HOH HOH . G 5 HOH A 101 501 165 HOH HOH . G 5 HOH A 102 502 79 HOH HOH . G 5 HOH A 103 503 50 HOH HOH . G 5 HOH A 104 504 32 HOH HOH . G 5 HOH A 105 505 91 HOH HOH . G 5 HOH A 106 506 127 HOH HOH . G 5 HOH A 107 507 84 HOH HOH . G 5 HOH A 108 508 111 HOH HOH . G 5 HOH A 109 509 69 HOH HOH . G 5 HOH A 110 510 116 HOH HOH . G 5 HOH A 111 511 158 HOH HOH . G 5 HOH A 112 512 138 HOH HOH . G 5 HOH A 113 513 101 HOH HOH . G 5 HOH A 114 514 81 HOH HOH . G 5 HOH A 115 515 134 HOH HOH . G 5 HOH A 116 516 13 HOH HOH . G 5 HOH A 117 517 123 HOH HOH . G 5 HOH A 118 518 104 HOH HOH . G 5 HOH A 119 519 85 HOH HOH . G 5 HOH A 120 520 26 HOH HOH . G 5 HOH A 121 521 94 HOH HOH . G 5 HOH A 122 522 181 HOH HOH . G 5 HOH A 123 523 75 HOH HOH . G 5 HOH A 124 524 102 HOH HOH . G 5 HOH A 125 525 78 HOH HOH . G 5 HOH A 126 526 63 HOH HOH . G 5 HOH A 127 527 114 HOH HOH . G 5 HOH A 128 528 99 HOH HOH . G 5 HOH A 129 529 93 HOH HOH . G 5 HOH A 130 530 151 HOH HOH . G 5 HOH A 131 531 28 HOH HOH . G 5 HOH A 132 532 60 HOH HOH . G 5 HOH A 133 533 57 HOH HOH . G 5 HOH A 134 534 156 HOH HOH . G 5 HOH A 135 535 51 HOH HOH . G 5 HOH A 136 536 154 HOH HOH . G 5 HOH A 137 537 184 HOH HOH . G 5 HOH A 138 538 169 HOH HOH . G 5 HOH A 139 539 168 HOH HOH . G 5 HOH A 140 540 153 HOH HOH . G 5 HOH A 141 541 108 HOH HOH . G 5 HOH A 142 542 182 HOH HOH . G 5 HOH A 143 543 112 HOH HOH . G 5 HOH A 144 544 89 HOH HOH . G 5 HOH A 145 545 59 HOH HOH . G 5 HOH A 146 546 86 HOH HOH . G 5 HOH A 147 547 95 HOH HOH . G 5 HOH A 148 548 133 HOH HOH . G 5 HOH A 149 549 125 HOH HOH . G 5 HOH A 150 550 129 HOH HOH . G 5 HOH A 151 551 155 HOH HOH . G 5 HOH A 152 552 88 HOH HOH . G 5 HOH A 153 553 121 HOH HOH . G 5 HOH A 154 554 19 HOH HOH . G 5 HOH A 155 555 47 HOH HOH . G 5 HOH A 156 556 66 HOH HOH . G 5 HOH A 157 557 56 HOH HOH . G 5 HOH A 158 558 92 HOH HOH . G 5 HOH A 159 559 166 HOH HOH . G 5 HOH A 160 560 98 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -10.237 _atom_site.Cartn_y -24.876 _atom_site.Cartn_z 3.103 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 8.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 1 #