data_5MNY # _model_server_result.job_id KUF_kKAWSwhxNTBGjXQ3KQ _model_server_result.datetime_utc '2024-11-17 12:42:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mny # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5MNY # _exptl.entry_id 5MNY _exptl.method 'NEUTRON DIFFRACTION' # _entity.details ? _entity.formula_weight 94.134 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description phenylazanium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MNY _cell.length_a 54.902 _cell.length_b 58.453 _cell.length_c 67.476 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MNY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc5 B CA CA . A CA 301 1_555 D O DOD . A DOD 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc6 B CA CA . A CA 301 1_555 D O DOD . A DOD 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? # _chem_comp.formula 'C6 H8 N 1' _chem_comp.formula_weight 94.134 _chem_comp.id WOT _chem_comp.mon_nstd_flag . _chem_comp.name phenylazanium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C1 WOT sing 376 n n C6 C1 WOT doub 377 n y C6 C5 WOT sing 378 n y C1 C2 WOT sing 379 n y C5 C4 WOT doub 380 n y C2 C3 WOT doub 381 n y C4 C3 WOT sing 382 n y C2 H2 WOT sing 383 n n C3 H1 WOT sing 384 n n C4 H3 WOT sing 385 n n C5 H4 WOT sing 386 n n C6 H5 WOT sing 387 n n N HN3 WOT sing 388 n n N HN2 WOT sing 389 n n N HN1 WOT sing 390 n n # _atom_sites.entry_id 5MNY _atom_sites.fract_transf_matrix[1][1] 0.018214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01482 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 WOT A 1 302 1 WOT ANL . D 4 DOD A 1 401 123 DOD DOD . D 4 DOD A 2 402 60 DOD DOD . D 4 DOD A 3 403 164 DOD DOD . D 4 DOD A 4 404 39 DOD DOD . D 4 DOD A 5 405 71 DOD DOD . D 4 DOD A 6 406 115 DOD DOD . D 4 DOD A 7 407 75 DOD DOD . D 4 DOD A 8 408 54 DOD DOD . D 4 DOD A 9 409 69 DOD DOD . D 4 DOD A 10 410 3 DOD DOD . D 4 DOD A 11 411 163 DOD DOD . D 4 DOD A 12 412 51 DOD DOD . D 4 DOD A 13 413 166 DOD DOD . D 4 DOD A 14 414 42 DOD DOD . D 4 DOD A 15 415 6 DOD DOD . D 4 DOD A 16 416 67 DOD DOD . D 4 DOD A 17 417 20 DOD DOD . D 4 DOD A 18 418 47 DOD DOD . D 4 DOD A 19 419 78 DOD DOD . D 4 DOD A 20 420 8 DOD DOD . D 4 DOD A 21 421 165 DOD DOD . D 4 DOD A 22 422 84 DOD DOD . D 4 DOD A 23 423 45 DOD DOD . D 4 DOD A 24 424 25 DOD DOD . D 4 DOD A 25 425 96 DOD DOD . D 4 DOD A 26 426 2 DOD DOD . D 4 DOD A 27 427 24 DOD DOD . D 4 DOD A 28 428 159 DOD DOD . D 4 DOD A 29 429 7 DOD DOD . D 4 DOD A 30 430 63 DOD DOD . D 4 DOD A 31 431 11 DOD DOD . D 4 DOD A 32 432 90 DOD DOD . D 4 DOD A 33 433 1 DOD DOD . D 4 DOD A 34 434 44 DOD DOD . D 4 DOD A 35 435 34 DOD DOD . D 4 DOD A 36 436 21 DOD DOD . D 4 DOD A 37 437 64 DOD DOD . D 4 DOD A 38 438 168 DOD DOD . D 4 DOD A 39 439 22 DOD DOD . D 4 DOD A 40 440 43 DOD DOD . D 4 DOD A 41 441 9 DOD DOD . D 4 DOD A 42 442 125 DOD DOD . D 4 DOD A 43 443 72 DOD DOD . D 4 DOD A 44 444 27 DOD DOD . D 4 DOD A 45 445 12 DOD DOD . D 4 DOD A 46 446 160 DOD DOD . D 4 DOD A 47 447 5 DOD DOD . D 4 DOD A 48 448 33 DOD DOD . D 4 DOD A 49 449 17 DOD DOD . D 4 DOD A 50 450 15 DOD DOD . D 4 DOD A 51 451 4 DOD DOD . D 4 DOD A 52 452 10 DOD DOD . D 4 DOD A 53 453 18 DOD DOD . D 4 DOD A 54 454 119 DOD DOD . D 4 DOD A 55 455 19 DOD DOD . D 4 DOD A 56 456 87 DOD DOD . D 4 DOD A 57 457 38 DOD DOD . D 4 DOD A 58 458 127 DOD DOD . D 4 DOD A 59 459 16 DOD DOD . D 4 DOD A 60 460 112 DOD DOD . D 4 DOD A 61 461 79 DOD DOD . D 4 DOD A 62 462 113 DOD DOD . D 4 DOD A 63 463 28 DOD DOD . D 4 DOD A 64 464 46 DOD DOD . D 4 DOD A 65 465 53 DOD DOD . D 4 DOD A 66 466 29 DOD DOD . D 4 DOD A 67 467 13 DOD DOD . D 4 DOD A 68 468 36 DOD DOD . D 4 DOD A 69 469 58 DOD DOD . D 4 DOD A 70 470 120 DOD DOD . D 4 DOD A 71 471 49 DOD DOD . D 4 DOD A 72 472 86 DOD DOD . D 4 DOD A 73 473 31 DOD DOD . D 4 DOD A 74 474 121 DOD DOD . D 4 DOD A 75 475 126 DOD DOD . D 4 DOD A 76 476 61 DOD DOD . D 4 DOD A 77 477 104 DOD DOD . D 4 DOD A 78 478 48 DOD DOD . D 4 DOD A 79 479 14 DOD DOD . D 4 DOD A 80 480 50 DOD DOD . D 4 DOD A 81 481 32 DOD DOD . D 4 DOD A 82 482 169 DOD DOD . D 4 DOD A 83 483 141 DOD DOD . D 4 DOD A 84 484 30 DOD DOD . D 4 DOD A 85 485 35 DOD DOD . D 4 DOD A 86 486 146 DOD DOD . D 4 DOD A 87 487 23 DOD DOD . D 4 DOD A 88 488 56 DOD DOD . D 4 DOD A 89 489 83 DOD DOD . D 4 DOD A 90 490 92 DOD DOD . D 4 DOD A 91 491 57 DOD DOD . D 4 DOD A 92 492 162 DOD DOD . D 4 DOD A 93 493 52 DOD DOD . D 4 DOD A 94 494 145 DOD DOD . D 4 DOD A 95 495 26 DOD DOD . D 4 DOD A 96 496 158 DOD DOD . D 4 DOD A 97 497 105 DOD DOD . D 4 DOD A 98 498 117 DOD DOD . D 4 DOD A 99 499 111 DOD DOD . D 4 DOD A 100 500 73 DOD DOD . D 4 DOD A 101 501 107 DOD DOD . D 4 DOD A 102 502 116 DOD DOD . D 4 DOD A 103 503 130 DOD DOD . D 4 DOD A 104 504 110 DOD DOD . D 4 DOD A 105 505 37 DOD DOD . D 4 DOD A 106 506 68 DOD DOD . D 4 DOD A 107 507 157 DOD DOD . D 4 DOD A 108 508 128 DOD DOD . D 4 DOD A 109 509 161 DOD DOD . D 4 DOD A 110 510 100 DOD DOD . D 4 DOD A 111 511 167 DOD DOD . D 4 DOD A 112 512 136 DOD DOD . D 4 DOD A 113 513 74 DOD DOD . D 4 DOD A 114 514 82 DOD DOD . D 4 DOD A 115 515 91 DOD DOD . D 4 DOD A 116 516 77 DOD DOD . D 4 DOD A 117 517 41 DOD DOD . D 4 DOD A 118 518 170 DOD DOD . D 4 DOD A 119 519 108 DOD DOD . D 4 DOD A 120 520 131 DOD DOD . D 4 DOD A 121 521 143 DOD DOD . D 4 DOD A 122 522 129 DOD DOD . D 4 DOD A 123 523 88 DOD DOD . D 4 DOD A 124 524 137 DOD DOD . D 4 DOD A 125 525 133 DOD DOD . D 4 DOD A 126 526 76 DOD DOD . D 4 DOD A 127 527 62 DOD DOD . D 4 DOD A 128 528 66 DOD DOD . D 4 DOD A 129 529 93 DOD DOD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 WOT . . . C 3 -1.654 -15.243 -17.044 1 21.57 ? C1 WOT 302 A 1 HETATM 2 C C2 WOT . . . C 3 -0.945 -15.569 -15.908 1 21.75 ? C2 WOT 302 A 1 HETATM 3 C C3 WOT . . . C 3 -0.833 -14.617 -14.905 1 21.31 ? C3 WOT 302 A 1 HETATM 4 C C4 WOT . . . C 3 -1.432 -13.383 -15.038 1 32.94 ? C4 WOT 302 A 1 HETATM 5 C C5 WOT . . . C 3 -2.147 -13.086 -16.179 1 22.18 ? C5 WOT 302 A 1 HETATM 6 C C6 WOT . . . C 3 -2.262 -14.018 -17.197 1 21.85 ? C6 WOT 302 A 1 HETATM 7 N N WOT . . . C 3 -1.727 -16.221 -18.133 1 19.96 1 N WOT 302 A 1 HETATM 8 H H2 WOT . . . C 3 -0.503 -16.548 -15.766 1 19.27 ? H2 WOT 302 A 1 HETATM 9 D DN3 WOT . . . C 3 -0.843 -16.728 -18.175 1 18.83 ? DN3 WOT 302 A 1 HETATM 10 D DN2 WOT . . . C 3 -2.465 -16.899 -17.962 1 18.87 ? DN2 WOT 302 A 1 HETATM 11 D DN1 WOT . . . C 3 -1.895 -15.756 -19.025 1 16.67 ? DN1 WOT 302 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #