data_5MO2
#
_model_server_result.job_id            9i9xURCjHCJQwzv0ReIWjw 
_model_server_result.datetime_utc      '2024-11-07 10:13:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mo2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    5MO2 
#
_exptl.entry_id    5MO2 
_exptl.method      'NEUTRON DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              128.195 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[azanyl(piperidin-1-yl)methylidene]azanium' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MO2 
_cell.length_a            54.941 
_cell.length_b            58.636 
_cell.length_c            67.51 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5MO2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc5 B CA CA . A CA 301 1_555 E O DOD . A DOD 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc6 B CA CA . A CA 301 1_555 E O DOD . A DOD 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
#
_chem_comp.formula           'C6 H14 N3 1' 
_chem_comp.formula_weight    128.195 
_chem_comp.id                D86 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[azanyl(piperidin-1-yl)methylidene]azanium' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C7 D86 doub 83 n n 
N8 C7 D86 sing 84 n n 
C7 N4 D86 sing 85 n n 
N4 C3 D86 sing 86 n n 
N4 C5 D86 sing 87 n n 
C3 C2 D86 sing 88 n n 
C5 C6 D86 sing 89 n n 
C2 C1 D86 sing 90 n n 
C6 C1 D86 sing 91 n n 
C1 H1 D86 sing 92 n n 
C1 H2 D86 sing 93 n n 
C6 H3 D86 sing 94 n n 
C6 H4 D86 sing 95 n n 
C5 H6 D86 sing 96 n n 
C5 H5 D86 sing 97 n n 
C3 H7 D86 sing 98 n n 
C3 H8 D86 sing 99 n n 
C2 H9 D86 sing 100 n n 
C2 H10 D86 sing 101 n n 
N8 H11 D86 sing 102 n n 
N8 H12 D86 sing 103 n n 
N9 H13 D86 sing 104 n n 
N9 H14 D86 sing 105 n n 
#
_atom_sites.entry_id                     5MO2 
_atom_sites.fract_transf_matrix[1][1]    0.018201 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017054 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014813 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 301 1 CA CA . 
C 3 D86 A 1 302 1 D86 PIZ . 
D 4 SO4 A 1 303 1 SO4 SO4 . 
E 5 DOD A 1 401 51 DOD DOD . 
E 5 DOD A 2 402 100 DOD DOD . 
E 5 DOD A 3 403 87 DOD DOD . 
E 5 DOD A 4 404 106 DOD DOD . 
E 5 DOD A 5 405 52 DOD DOD . 
E 5 DOD A 6 406 135 DOD DOD . 
E 5 DOD A 7 407 88 DOD DOD . 
E 5 DOD A 8 408 107 DOD DOD . 
E 5 DOD A 9 409 6 DOD DOD . 
E 5 DOD A 10 410 38 DOD DOD . 
E 5 DOD A 11 411 15 DOD DOD . 
E 5 DOD A 12 412 94 DOD DOD . 
E 5 DOD A 13 413 64 DOD DOD . 
E 5 DOD A 14 414 20 DOD DOD . 
E 5 DOD A 15 415 67 DOD DOD . 
E 5 DOD A 16 416 39 DOD DOD . 
E 5 DOD A 17 417 37 DOD DOD . 
E 5 DOD A 18 418 19 DOD DOD . 
E 5 DOD A 19 419 9 DOD DOD . 
E 5 DOD A 20 420 54 DOD DOD . 
E 5 DOD A 21 421 30 DOD DOD . 
E 5 DOD A 22 422 43 DOD DOD . 
E 5 DOD A 23 423 79 DOD DOD . 
E 5 DOD A 24 424 25 DOD DOD . 
E 5 DOD A 25 425 21 DOD DOD . 
E 5 DOD A 26 426 41 DOD DOD . 
E 5 DOD A 27 427 119 DOD DOD . 
E 5 DOD A 28 428 50 DOD DOD . 
E 5 DOD A 29 429 144 DOD DOD . 
E 5 DOD A 30 430 126 DOD DOD . 
E 5 DOD A 31 431 22 DOD DOD . 
E 5 DOD A 32 432 105 DOD DOD . 
E 5 DOD A 33 433 11 DOD DOD . 
E 5 DOD A 34 434 27 DOD DOD . 
E 5 DOD A 35 435 77 DOD DOD . 
E 5 DOD A 36 436 23 DOD DOD . 
E 5 DOD A 37 437 80 DOD DOD . 
E 5 DOD A 38 438 72 DOD DOD . 
E 5 DOD A 39 439 24 DOD DOD . 
E 5 DOD A 40 440 115 DOD DOD . 
E 5 DOD A 41 441 16 DOD DOD . 
E 5 DOD A 42 442 75 DOD DOD . 
E 5 DOD A 43 443 53 DOD DOD . 
E 5 DOD A 44 444 66 DOD DOD . 
E 5 DOD A 45 445 1 DOD DOD . 
E 5 DOD A 46 446 8 DOD DOD . 
E 5 DOD A 47 447 4 DOD DOD . 
E 5 DOD A 48 448 5 DOD DOD . 
E 5 DOD A 49 449 26 DOD DOD . 
E 5 DOD A 50 450 138 DOD DOD . 
E 5 DOD A 51 451 12 DOD DOD . 
E 5 DOD A 52 452 2 DOD DOD . 
E 5 DOD A 53 453 131 DOD DOD . 
E 5 DOD A 54 454 132 DOD DOD . 
E 5 DOD A 55 455 44 DOD DOD . 
E 5 DOD A 56 456 10 DOD DOD . 
E 5 DOD A 57 457 65 DOD DOD . 
E 5 DOD A 58 458 3 DOD DOD . 
E 5 DOD A 59 459 85 DOD DOD . 
E 5 DOD A 60 460 70 DOD DOD . 
E 5 DOD A 61 461 31 DOD DOD . 
E 5 DOD A 62 462 13 DOD DOD . 
E 5 DOD A 63 463 60 DOD DOD . 
E 5 DOD A 64 464 35 DOD DOD . 
E 5 DOD A 65 465 116 DOD DOD . 
E 5 DOD A 66 466 55 DOD DOD . 
E 5 DOD A 67 467 68 DOD DOD . 
E 5 DOD A 68 468 134 DOD DOD . 
E 5 DOD A 69 469 18 DOD DOD . 
E 5 DOD A 70 470 86 DOD DOD . 
E 5 DOD A 71 471 14 DOD DOD . 
E 5 DOD A 72 472 40 DOD DOD . 
E 5 DOD A 73 473 36 DOD DOD . 
E 5 DOD A 74 474 142 DOD DOD . 
E 5 DOD A 75 475 29 DOD DOD . 
E 5 DOD A 76 476 99 DOD DOD . 
E 5 DOD A 77 477 7 DOD DOD . 
E 5 DOD A 78 478 56 DOD DOD . 
E 5 DOD A 79 479 108 DOD DOD . 
E 5 DOD A 80 480 112 DOD DOD . 
E 5 DOD A 81 481 91 DOD DOD . 
E 5 DOD A 82 482 69 DOD DOD . 
E 5 DOD A 83 483 125 DOD DOD . 
E 5 DOD A 84 484 17 DOD DOD . 
E 5 DOD A 85 485 28 DOD DOD . 
E 5 DOD A 86 486 63 DOD DOD . 
E 5 DOD A 87 487 110 DOD DOD . 
E 5 DOD A 88 488 82 DOD DOD . 
E 5 DOD A 89 489 74 DOD DOD . 
E 5 DOD A 90 490 33 DOD DOD . 
E 5 DOD A 91 491 48 DOD DOD . 
E 5 DOD A 92 492 45 DOD DOD . 
E 5 DOD A 93 493 104 DOD DOD . 
E 5 DOD A 94 494 34 DOD DOD . 
E 5 DOD A 95 495 47 DOD DOD . 
E 5 DOD A 96 496 117 DOD DOD . 
E 5 DOD A 97 497 101 DOD DOD . 
E 5 DOD A 98 498 76 DOD DOD . 
E 5 DOD A 99 499 141 DOD DOD . 
E 5 DOD A 100 500 83 DOD DOD . 
E 5 DOD A 101 501 130 DOD DOD . 
E 5 DOD A 102 502 113 DOD DOD . 
E 5 DOD A 103 503 102 DOD DOD . 
E 5 DOD A 104 504 49 DOD DOD . 
E 5 DOD A 105 505 32 DOD DOD . 
E 5 DOD A 106 506 71 DOD DOD . 
E 5 DOD A 107 507 46 DOD DOD . 
E 5 DOD A 108 508 58 DOD DOD . 
E 5 DOD A 109 509 124 DOD DOD . 
E 5 DOD A 110 510 137 DOD DOD . 
E 5 DOD A 111 511 84 DOD DOD . 
E 5 DOD A 112 512 140 DOD DOD . 
E 5 DOD A 113 513 109 DOD DOD . 
E 5 DOD A 114 514 95 DOD DOD . 
E 5 DOD A 115 515 61 DOD DOD . 
E 5 DOD A 116 516 42 DOD DOD . 
E 5 DOD A 117 517 123 DOD DOD . 
E 5 DOD A 118 518 111 DOD DOD . 
E 5 DOD A 119 519 136 DOD DOD . 
E 5 DOD A 120 520 78 DOD DOD . 
E 5 DOD A 121 521 122 DOD DOD . 
E 5 DOD A 122 522 103 DOD DOD . 
E 5 DOD A 123 523 98 DOD DOD . 
E 5 DOD A 124 524 127 DOD DOD . 
E 5 DOD A 125 525 93 DOD DOD . 
E 5 DOD A 126 526 118 DOD DOD . 
E 5 DOD A 127 527 59 DOD DOD . 
E 5 DOD A 128 528 89 DOD DOD . 
E 5 DOD A 129 529 73 DOD DOD . 
E 5 DOD A 130 530 139 DOD DOD . 
E 5 DOD A 131 531 143 DOD DOD . 
E 5 DOD A 132 532 133 DOD DOD . 
E 5 DOD A 133 533 128 DOD DOD . 
E 5 DOD A 134 534 57 DOD DOD . 
E 5 DOD A 135 535 81 DOD DOD . 
E 5 DOD A 136 536 62 DOD DOD . 
E 5 DOD A 137 537 90 DOD DOD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 D86 . . . C 3 -1.695 -13.542 -14.637 1 17.51 ? C1 D86 302 A 1 
HETATM 2 C C6 D86 . . . C 3 -1.397 -15.011 -14.809 1 12.92 ? C6 D86 302 A 1 
HETATM 3 C C5 D86 . . . C 3 -0.774 -15.281 -16.154 1 12.29 ? C5 D86 302 A 1 
HETATM 4 N N4 D86 . . . C 3 -1.624 -14.782 -17.243 1 11.69 ? N4 D86 302 A 1 
HETATM 5 C C3 D86 . . . C 3 -1.899 -13.338 -17.1 1 11.61 ? C3 D86 302 A 1 
HETATM 6 C C2 D86 . . . C 3 -2.549 -13.05 -15.772 1 14.98 ? C2 D86 302 A 1 
HETATM 7 C C7 D86 . . . C 3 -2.052 -15.499 -18.271 1 9.75 ? C7 D86 302 A 1 
HETATM 8 N N8 D86 . . . C 3 -1.726 -16.783 -18.386 1 12.25 ? N8 D86 302 A 1 
HETATM 9 N N9 D86 . . . C 3 -2.8 -14.984 -19.224 1 12.75 1 N9 D86 302 A 1 
HETATM 10 H H1 D86 . . . C 3 -2.197 -13.383 -13.685 1 14.46 ? H1 D86 302 A 1 
HETATM 11 H H2 D86 . . . C 3 -0.786 -12.95 -14.555 1 16.26 ? H2 D86 302 A 1 
HETATM 12 H H3 D86 . . . C 3 -0.758 -15.374 -14.006 1 13.72 ? H3 D86 302 A 1 
HETATM 13 H H4 D86 . . . C 3 -2.324 -15.574 -14.711 1 14.96 ? H4 D86 302 A 1 
HETATM 14 H H6 D86 . . . C 3 0.247 -14.903 -16.197 1 14.71 ? H6 D86 302 A 1 
HETATM 15 H H5 D86 . . . C 3 -0.662 -16.355 -16.292 1 13.54 ? H5 D86 302 A 1 
HETATM 16 H H7 D86 . . . C 3 -2.525 -13.008 -17.926 1 15.25 ? H7 D86 302 A 1 
HETATM 17 H H8 D86 . . . C 3 -0.995 -12.739 -17.19 1 13.63 ? H8 D86 302 A 1 
HETATM 18 H H9 D86 . . . C 3 -3.537 -13.502 -15.706 1 14.71 ? H9 D86 302 A 1 
HETATM 19 H H10 D86 . . . C 3 -2.743 -11.983 -15.687 1 16.66 ? H10 D86 302 A 1 
HETATM 20 D D11 D86 . . . C 3 -2.062 -17.348 -19.155 1 12.03 ? D11 D86 302 A 1 
HETATM 21 D D12 D86 . . . C 3 -1.115 -17.251 -17.737 1 11.66 ? D12 D86 302 A 1 
HETATM 22 D D13 D86 . . . C 3 -3.098 -14.014 -19.259 1 18.4 ? D13 D86 302 A 1 
HETATM 23 D D14 D86 . . . C 3 -3.113 -15.547 -20.008 1 16.03 ? D14 D86 302 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#