data_5MP0 # _model_server_result.job_id PNE_StVmZgzkzhz-77SPQw _model_server_result.datetime_utc '2024-11-27 00:16:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mp0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5MP0 # _exptl.entry_id 5MP0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MP0 _cell.length_a 48.05 _cell.length_b 60.57 _cell.length_c 65.45 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MP0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5MP0 _atom_sites.fract_transf_matrix[1][1] 0.020812 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01651 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015279 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO D 1 301 1 EDO EDO . C 2 EDO D 1 302 2 EDO EDO . D 3 HOH D 1 401 37 HOH HOH . D 3 HOH D 2 402 60 HOH HOH . D 3 HOH D 3 403 8 HOH HOH . D 3 HOH D 4 404 10 HOH HOH . D 3 HOH D 5 405 11 HOH HOH . D 3 HOH D 6 406 15 HOH HOH . D 3 HOH D 7 407 55 HOH HOH . D 3 HOH D 8 408 23 HOH HOH . D 3 HOH D 9 409 17 HOH HOH . D 3 HOH D 10 410 12 HOH HOH . D 3 HOH D 11 411 13 HOH HOH . D 3 HOH D 12 412 18 HOH HOH . D 3 HOH D 13 413 46 HOH HOH . D 3 HOH D 14 414 39 HOH HOH . D 3 HOH D 15 415 4 HOH HOH . D 3 HOH D 16 416 38 HOH HOH . D 3 HOH D 17 417 2 HOH HOH . D 3 HOH D 18 418 31 HOH HOH . D 3 HOH D 19 419 59 HOH HOH . D 3 HOH D 20 420 1 HOH HOH . D 3 HOH D 21 421 14 HOH HOH . D 3 HOH D 22 422 6 HOH HOH . D 3 HOH D 23 423 24 HOH HOH . D 3 HOH D 24 424 32 HOH HOH . D 3 HOH D 25 425 5 HOH HOH . D 3 HOH D 26 426 27 HOH HOH . D 3 HOH D 27 427 9 HOH HOH . D 3 HOH D 28 428 3 HOH HOH . D 3 HOH D 29 429 22 HOH HOH . D 3 HOH D 30 430 28 HOH HOH . D 3 HOH D 31 431 29 HOH HOH . D 3 HOH D 32 432 16 HOH HOH . D 3 HOH D 33 433 7 HOH HOH . D 3 HOH D 34 434 35 HOH HOH . D 3 HOH D 35 435 19 HOH HOH . D 3 HOH D 36 436 57 HOH HOH . D 3 HOH D 37 437 33 HOH HOH . D 3 HOH D 38 438 49 HOH HOH . D 3 HOH D 39 439 30 HOH HOH . D 3 HOH D 40 440 50 HOH HOH . D 3 HOH D 41 441 52 HOH HOH . D 3 HOH D 42 442 25 HOH HOH . D 3 HOH D 43 443 48 HOH HOH . D 3 HOH D 44 444 47 HOH HOH . D 3 HOH D 45 445 34 HOH HOH . D 3 HOH D 46 446 43 HOH HOH . D 3 HOH D 47 447 62 HOH HOH . D 3 HOH D 48 448 42 HOH HOH . D 3 HOH D 49 449 54 HOH HOH . D 3 HOH D 50 450 40 HOH HOH . D 3 HOH D 51 451 36 HOH HOH . D 3 HOH D 52 452 21 HOH HOH . D 3 HOH D 53 453 58 HOH HOH . D 3 HOH D 54 454 26 HOH HOH . D 3 HOH D 55 455 45 HOH HOH . D 3 HOH D 56 456 20 HOH HOH . D 3 HOH D 57 457 51 HOH HOH . D 3 HOH D 58 458 56 HOH HOH . D 3 HOH D 59 459 53 HOH HOH . D 3 HOH D 60 460 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -41.941 7.417 91.82 1 45.11 ? C1 EDO 302 D 1 HETATM 2 O O1 EDO . . . C 2 -42.435 7.649 93.183 1 56.18 ? O1 EDO 302 D 1 HETATM 3 C C2 EDO . . . C 2 -41.93 5.913 91.515 1 33.38 ? C2 EDO 302 D 1 HETATM 4 O O2 EDO . . . C 2 -40.585 5.22 91.706 1 46.33 ? O2 EDO 302 D 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #