data_5MPJ # _model_server_result.job_id KfyAu9DWiyOmVNIHMdYfpQ _model_server_result.datetime_utc '2024-11-24 15:42:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mpj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5MPJ # _exptl.entry_id 5MPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 246.755 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3-chloranyl-4-phenyl-phenyl)methyl-ethyl-azanium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MPJ _cell.length_a 64.76 _cell.length_b 68.46 _cell.length_c 334.74 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NH1 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 267 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 244 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id O35 _struct_conn.ptnr2_label_comp_id IHP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id IHP _struct_conn.ptnr2_auth_seq_id 402 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.368 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H17 Cl N 1' _chem_comp.formula_weight 246.755 _chem_comp.id J2P _chem_comp.mon_nstd_flag . _chem_comp.name (3-chloranyl-4-phenyl-phenyl)methyl-ethyl-azanium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C14 J2P doub 271 n y C13 C12 J2P sing 272 n y C14 C9 J2P sing 273 n y C12 C11 J2P doub 274 n y C9 C6 J2P sing 275 n n C9 C10 J2P doub 276 n y C11 C10 J2P sing 277 n y C5 C6 J2P doub 278 n y C5 C4 J2P sing 279 n y C6 C7 J2P sing 280 n y C4 C3 J2P doub 281 n y C7 CL J2P sing 282 n n C7 C8 J2P doub 283 n y C3 C8 J2P sing 284 n y C3 C2 J2P sing 285 n n N C2 J2P sing 286 n n N C1 J2P sing 287 n n C C1 J2P sing 288 n n C1 H1 J2P sing 289 n n C1 H2 J2P sing 290 n n C2 H3 J2P sing 291 n n C2 H4 J2P sing 292 n n C4 H5 J2P sing 293 n n C5 H6 J2P sing 294 n n C8 H7 J2P sing 295 n n C10 H8 J2P sing 296 n n C11 H9 J2P sing 297 n n C12 H10 J2P sing 298 n n C13 H11 J2P sing 299 n n C14 H12 J2P sing 300 n n N H13 J2P sing 301 n n N H14 J2P sing 302 n n C H15 J2P sing 303 n n C H16 J2P sing 304 n n C H17 J2P sing 305 n n # _atom_sites.entry_id 5MPJ _atom_sites.fract_transf_matrix[1][1] 0.015442 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014607 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002987 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 401 1 ADP ADP . D 3 IHP A 1 402 2 IHP I6P . E 4 J2P A 1 403 1 J2P C04 . F 5 HOH A 1 501 196 HOH HOH . F 5 HOH A 2 502 52 HOH HOH . F 5 HOH A 3 503 90 HOH HOH . F 5 HOH A 4 504 80 HOH HOH . F 5 HOH A 5 505 121 HOH HOH . F 5 HOH A 6 506 9 HOH HOH . F 5 HOH A 7 507 217 HOH HOH . F 5 HOH A 8 508 32 HOH HOH . F 5 HOH A 9 509 8 HOH HOH . F 5 HOH A 10 510 25 HOH HOH . F 5 HOH A 11 511 4 HOH HOH . F 5 HOH A 12 512 35 HOH HOH . F 5 HOH A 13 513 197 HOH HOH . F 5 HOH A 14 514 81 HOH HOH . F 5 HOH A 15 515 160 HOH HOH . F 5 HOH A 16 516 107 HOH HOH . F 5 HOH A 17 517 212 HOH HOH . F 5 HOH A 18 518 178 HOH HOH . F 5 HOH A 19 519 198 HOH HOH . F 5 HOH A 20 520 12 HOH HOH . F 5 HOH A 21 521 51 HOH HOH . F 5 HOH A 22 522 40 HOH HOH . F 5 HOH A 23 523 6 HOH HOH . F 5 HOH A 24 524 38 HOH HOH . F 5 HOH A 25 525 83 HOH HOH . F 5 HOH A 26 526 218 HOH HOH . F 5 HOH A 27 527 195 HOH HOH . F 5 HOH A 28 528 13 HOH HOH . F 5 HOH A 29 529 3 HOH HOH . F 5 HOH A 30 530 155 HOH HOH . F 5 HOH A 31 531 189 HOH HOH . F 5 HOH A 32 532 201 HOH HOH . F 5 HOH A 33 533 98 HOH HOH . F 5 HOH A 34 534 148 HOH HOH . F 5 HOH A 35 535 55 HOH HOH . F 5 HOH A 36 536 59 HOH HOH . F 5 HOH A 37 537 94 HOH HOH . F 5 HOH A 38 538 171 HOH HOH . F 5 HOH A 39 539 20 HOH HOH . F 5 HOH A 40 540 91 HOH HOH . F 5 HOH A 41 541 22 HOH HOH . F 5 HOH A 42 542 181 HOH HOH . F 5 HOH A 43 543 202 HOH HOH . F 5 HOH A 44 544 96 HOH HOH . F 5 HOH A 45 545 48 HOH HOH . F 5 HOH A 46 546 174 HOH HOH . F 5 HOH A 47 547 72 HOH HOH . F 5 HOH A 48 548 33 HOH HOH . F 5 HOH A 49 549 10 HOH HOH . F 5 HOH A 50 550 71 HOH HOH . F 5 HOH A 51 551 49 HOH HOH . F 5 HOH A 52 552 29 HOH HOH . F 5 HOH A 53 553 61 HOH HOH . F 5 HOH A 54 554 190 HOH HOH . F 5 HOH A 55 555 76 HOH HOH . F 5 HOH A 56 556 200 HOH HOH . F 5 HOH A 57 557 97 HOH HOH . F 5 HOH A 58 558 53 HOH HOH . F 5 HOH A 59 559 116 HOH HOH . F 5 HOH A 60 560 2 HOH HOH . F 5 HOH A 61 561 19 HOH HOH . F 5 HOH A 62 562 5 HOH HOH . F 5 HOH A 63 563 11 HOH HOH . F 5 HOH A 64 564 211 HOH HOH . F 5 HOH A 65 565 170 HOH HOH . F 5 HOH A 66 566 56 HOH HOH . F 5 HOH A 67 567 119 HOH HOH . F 5 HOH A 68 568 144 HOH HOH . F 5 HOH A 69 569 117 HOH HOH . F 5 HOH A 70 570 66 HOH HOH . F 5 HOH A 71 571 16 HOH HOH . F 5 HOH A 72 572 213 HOH HOH . F 5 HOH A 73 573 100 HOH HOH . F 5 HOH A 74 574 142 HOH HOH . F 5 HOH A 75 575 41 HOH HOH . F 5 HOH A 76 576 216 HOH HOH . F 5 HOH A 77 577 136 HOH HOH . F 5 HOH A 78 578 67 HOH HOH . F 5 HOH A 79 579 37 HOH HOH . F 5 HOH A 80 580 105 HOH HOH . F 5 HOH A 81 581 63 HOH HOH . F 5 HOH A 82 582 183 HOH HOH . F 5 HOH A 83 583 101 HOH HOH . F 5 HOH A 84 584 79 HOH HOH . F 5 HOH A 85 585 47 HOH HOH . F 5 HOH A 86 586 132 HOH HOH . F 5 HOH A 87 587 65 HOH HOH . F 5 HOH A 88 588 131 HOH HOH . F 5 HOH A 89 589 26 HOH HOH . F 5 HOH A 90 590 124 HOH HOH . F 5 HOH A 91 591 172 HOH HOH . F 5 HOH A 92 592 168 HOH HOH . F 5 HOH A 93 593 78 HOH HOH . F 5 HOH A 94 594 54 HOH HOH . F 5 HOH A 95 595 69 HOH HOH . F 5 HOH A 96 596 210 HOH HOH . F 5 HOH A 97 597 50 HOH HOH . F 5 HOH A 98 598 87 HOH HOH . F 5 HOH A 99 599 99 HOH HOH . F 5 HOH A 100 600 150 HOH HOH . F 5 HOH A 101 601 177 HOH HOH . F 5 HOH A 102 602 43 HOH HOH . F 5 HOH A 103 603 162 HOH HOH . F 5 HOH A 104 604 7 HOH HOH . F 5 HOH A 105 605 157 HOH HOH . F 5 HOH A 106 606 128 HOH HOH . F 5 HOH A 107 607 130 HOH HOH . F 5 HOH A 108 608 92 HOH HOH . F 5 HOH A 109 609 44 HOH HOH . F 5 HOH A 110 610 184 HOH HOH . F 5 HOH A 111 611 86 HOH HOH . F 5 HOH A 112 612 164 HOH HOH . F 5 HOH A 113 613 193 HOH HOH . F 5 HOH A 114 614 82 HOH HOH . F 5 HOH A 115 615 46 HOH HOH . F 5 HOH A 116 616 135 HOH HOH . F 5 HOH A 117 617 114 HOH HOH . F 5 HOH A 118 618 203 HOH HOH . F 5 HOH A 119 619 113 HOH HOH . F 5 HOH A 120 620 187 HOH HOH . F 5 HOH A 121 621 21 HOH HOH . F 5 HOH A 122 622 125 HOH HOH . F 5 HOH A 123 623 182 HOH HOH . F 5 HOH A 124 624 215 HOH HOH . F 5 HOH A 125 625 147 HOH HOH . F 5 HOH A 126 626 138 HOH HOH . F 5 HOH A 127 627 70 HOH HOH . F 5 HOH A 128 628 62 HOH HOH . F 5 HOH A 129 629 57 HOH HOH . F 5 HOH A 130 630 185 HOH HOH . F 5 HOH A 131 631 166 HOH HOH . F 5 HOH A 132 632 207 HOH HOH . F 5 HOH A 133 633 118 HOH HOH . F 5 HOH A 134 634 208 HOH HOH . F 5 HOH A 135 635 165 HOH HOH . F 5 HOH A 136 636 127 HOH HOH . F 5 HOH A 137 637 140 HOH HOH . F 5 HOH A 138 638 152 HOH HOH . F 5 HOH A 139 639 141 HOH HOH . G 5 HOH B 1 401 219 HOH HOH . G 5 HOH B 2 402 220 HOH HOH . G 5 HOH B 3 403 60 HOH HOH . G 5 HOH B 4 404 95 HOH HOH . G 5 HOH B 5 405 159 HOH HOH . G 5 HOH B 6 406 154 HOH HOH . G 5 HOH B 7 407 68 HOH HOH . G 5 HOH B 8 408 133 HOH HOH . G 5 HOH B 9 409 73 HOH HOH . G 5 HOH B 10 410 191 HOH HOH . G 5 HOH B 11 411 58 HOH HOH . G 5 HOH B 12 412 199 HOH HOH . G 5 HOH B 13 413 143 HOH HOH . G 5 HOH B 14 414 77 HOH HOH . G 5 HOH B 15 415 123 HOH HOH . G 5 HOH B 16 416 194 HOH HOH . G 5 HOH B 17 417 36 HOH HOH . G 5 HOH B 18 418 45 HOH HOH . G 5 HOH B 19 419 214 HOH HOH . G 5 HOH B 20 420 84 HOH HOH . G 5 HOH B 21 421 104 HOH HOH . G 5 HOH B 22 422 110 HOH HOH . G 5 HOH B 23 423 28 HOH HOH . G 5 HOH B 24 424 15 HOH HOH . G 5 HOH B 25 425 179 HOH HOH . G 5 HOH B 26 426 75 HOH HOH . G 5 HOH B 27 427 122 HOH HOH . G 5 HOH B 28 428 74 HOH HOH . G 5 HOH B 29 429 206 HOH HOH . G 5 HOH B 30 430 169 HOH HOH . G 5 HOH B 31 431 42 HOH HOH . G 5 HOH B 32 432 126 HOH HOH . G 5 HOH B 33 433 161 HOH HOH . G 5 HOH B 34 434 175 HOH HOH . G 5 HOH B 35 435 120 HOH HOH . G 5 HOH B 36 436 129 HOH HOH . G 5 HOH B 37 437 180 HOH HOH . G 5 HOH B 38 438 163 HOH HOH . G 5 HOH B 39 439 102 HOH HOH . G 5 HOH B 40 440 115 HOH HOH . G 5 HOH B 41 441 156 HOH HOH . G 5 HOH B 42 442 188 HOH HOH . G 5 HOH B 43 443 173 HOH HOH . G 5 HOH B 44 444 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 J2P . A . E 4 5.644 135.809 355.3 0.5 65.25 ? C1 J2P 403 A 1 HETATM 2 C C1 J2P . B . E 4 3.461 137.563 355.811 0.5 65.25 ? C1 J2P 403 A 1 HETATM 3 C C2 J2P . A . E 4 4.304 137.784 354.798 0.5 74.24 ? C2 J2P 403 A 1 HETATM 4 C C2 J2P . B . E 4 5.306 137.363 354.213 0.5 74.24 ? C2 J2P 403 A 1 HETATM 5 C C3 J2P . A . E 4 4.3 139.153 354.166 0.5 80.16 ? C3 J2P 403 A 1 HETATM 6 C C3 J2P . B . E 4 4.934 138.794 353.914 0.5 80.16 ? C3 J2P 403 A 1 HETATM 7 C C4 J2P . A . E 4 3.229 139.575 353.396 0.5 83.51 ? C4 J2P 403 A 1 HETATM 8 C C4 J2P . B . E 4 5.514 139.843 354.605 0.5 83.51 ? C4 J2P 403 A 1 HETATM 9 C C5 J2P . A . E 4 3.151 140.873 352.927 0.5 85.1 ? C5 J2P 403 A 1 HETATM 10 C C5 J2P . B . E 4 5.213 141.157 354.298 0.5 85.1 ? C5 J2P 403 A 1 HETATM 11 C C6 J2P . A . E 4 4.154 141.797 353.215 0.5 86.69 ? C6 J2P 403 A 1 HETATM 12 C C6 J2P . B . E 4 4.313 141.464 353.279 0.5 86.69 ? C6 J2P 403 A 1 HETATM 13 C C7 J2P . A . E 4 5.243 141.352 353.948 0.5 88.06 ? C7 J2P 403 A 1 HETATM 14 C C7 J2P . B . E 4 3.734 140.402 352.593 0.5 88.06 ? C7 J2P 403 A 1 HETATM 15 C C8 J2P . A . E 4 5.323 140.057 354.418 0.5 82.83 ? C8 J2P 403 A 1 HETATM 16 C C8 J2P . B . E 4 4.029 139.091 352.904 0.5 82.83 ? C8 J2P 403 A 1 HETATM 17 C C9 J2P . A . E 4 3.991 143.213 352.783 0.5 86.86 ? C9 J2P 403 A 1 HETATM 18 C C9 J2P . B . E 4 4.037 142.896 352.974 0.5 86.86 ? C9 J2P 403 A 1 HETATM 19 C C10 J2P . A . E 4 2.976 144.009 353.31 0.5 86.55 ? C10 J2P 403 A 1 HETATM 20 C C10 J2P . B . E 4 4.872 143.62 352.125 0.5 86.55 ? C10 J2P 403 A 1 HETATM 21 C C11 J2P . A . E 4 2.838 145.329 352.919 0.5 87.44 ? C11 J2P 403 A 1 HETATM 22 C C11 J2P . B . E 4 4.621 144.954 351.855 0.5 87.44 ? C11 J2P 403 A 1 HETATM 23 C C12 J2P . A . E 4 3.705 145.875 351.999 0.5 88.91 ? C12 J2P 403 A 1 HETATM 24 C C12 J2P . B . E 4 3.54 145.586 352.426 0.5 88.91 ? C12 J2P 403 A 1 HETATM 25 C C13 J2P . A . E 4 4.712 145.103 351.466 0.5 89.23 ? C13 J2P 403 A 1 HETATM 26 C C13 J2P . B . E 4 2.703 144.886 353.265 0.5 89.23 ? C13 J2P 403 A 1 HETATM 27 C C14 J2P . A . E 4 4.858 143.782 351.853 0.5 88.41 ? C14 J2P 403 A 1 HETATM 28 C C14 J2P . B . E 4 2.945 143.551 353.538 0.5 88.41 ? C14 J2P 403 A 1 HETATM 29 CL CL J2P . A . E 4 6.553 142.434 354.281 0.5 96.53 ? CL J2P 403 A 1 HETATM 30 CL CL J2P . B . E 4 2.642 140.699 351.28 0.5 96.53 ? CL J2P 403 A 1 HETATM 31 N N J2P . A . E 4 5.445 136.961 354.405 0.5 69.17 ? N J2P 403 A 1 HETATM 32 N N J2P . B . E 4 4.693 136.851 355.437 0.5 69.17 ? N J2P 403 A 1 HETATM 33 C C J2P . A . E 4 6.099 134.596 354.556 0.5 61.86 ? C J2P 403 A 1 HETATM 34 C C J2P . B . E 4 2.756 136.892 356.949 0.5 61.86 ? C J2P 403 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #