data_5MRM # _model_server_result.job_id 6GLg2wTcch8SLG7-QhR5dQ _model_server_result.datetime_utc '2025-07-03 23:28:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mrm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5MRM # _exptl.entry_id 5MRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5MRM _cell.length_a 74.03 _cell.length_b 74.03 _cell.length_c 223.91 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 47 A GLU 121 1_555 H CD CD . A CD 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc2 A OE2 GLU 47 A GLU 121 1_555 H CD CD . A CD 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc3 A OE1 GLU 64 A GLU 138 1_555 G CD CD . A CD 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc4 A OE2 GLU 67 A GLU 141 1_555 E K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.044 ? metalc ? metalc5 A OE1 GLU 67 A GLU 141 1_555 F K K . A K 405 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? metalc ? metalc6 A OE2 GLU 67 A GLU 141 1_555 F K K . A K 405 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc7 A OE1 GLU 67 A GLU 141 1_555 G CD CD . A CD 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc8 A OD2 ASP 73 A ASP 147 1_555 E K K . A K 404 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 3.225 ? metalc ? metalc9 A OE2 GLU 93 A GLU 167 1_555 I CD CD . A CD 408 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc10 A OD1 ASP 95 A ASP 169 1_555 F K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc11 A OD2 ASP 95 A ASP 169 1_555 F K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc12 A OE1 GLU 117 A GLU 191 1_555 H CD CD . A CD 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc13 A OE2 GLU 117 A GLU 191 1_555 H CD CD . A CD 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc14 A ND1 HIS 197 A HIS 271 1_555 H CD CD . A CD 407 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc15 D O ACT . A ACT 403 1_555 H CD CD . A CD 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc16 D OXT ACT . A ACT 403 1_555 H CD CD . A CD 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc17 E K K . A K 404 1_555 J O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc18 E K K . A K 404 1_555 J O HOH . A HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.001 ? metalc ? metalc19 E K K . A K 404 1_555 J O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc20 F K K . A K 405 1_555 J O HOH . A HOH 502 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? metalc ? metalc21 F K K . A K 405 1_555 J O HOH . A HOH 534 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 3.41 ? metalc ? metalc22 F K K . A K 405 1_555 J O HOH . A HOH 572 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc23 G CD CD . A CD 406 1_555 J O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc24 I CD CD . A CD 408 1_555 J O HOH . A HOH 514 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc25 I CD CD . A CD 408 1_555 J O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc26 I CD CD . A CD 408 1_555 J O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc27 I CD CD . A CD 408 1_555 J O HOH . A HOH 624 17_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5MRM _atom_sites.fract_transf_matrix[1][1] 0.013508 _atom_sites.fract_transf_matrix[1][2] 0.007799 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q9T A 1 401 1 Q9T LIG . C 3 TRS A 1 402 1 TRS TRS . D 4 ACT A 1 403 2 ACT ACT . E 5 K A 1 404 3 K K . F 5 K A 1 405 4 K K . G 6 CD A 1 406 5 CD CD . H 6 CD A 1 407 6 CD CD . I 6 CD A 1 408 7 CD CD . J 7 HOH A 1 501 63 HOH HOH . J 7 HOH A 2 502 68 HOH HOH . J 7 HOH A 3 503 81 HOH HOH . J 7 HOH A 4 504 33 HOH HOH . J 7 HOH A 5 505 26 HOH HOH . J 7 HOH A 6 506 13 HOH HOH . J 7 HOH A 7 507 62 HOH HOH . J 7 HOH A 8 508 21 HOH HOH . J 7 HOH A 9 509 8 HOH HOH . J 7 HOH A 10 510 121 HOH HOH . J 7 HOH A 11 511 28 HOH HOH . J 7 HOH A 12 512 64 HOH HOH . J 7 HOH A 13 513 50 HOH HOH . J 7 HOH A 14 514 134 HOH HOH . J 7 HOH A 15 515 11 HOH HOH . J 7 HOH A 16 516 18 HOH HOH . J 7 HOH A 17 517 16 HOH HOH . J 7 HOH A 18 518 107 HOH HOH . J 7 HOH A 19 519 105 HOH HOH . J 7 HOH A 20 520 14 HOH HOH . J 7 HOH A 21 521 27 HOH HOH . J 7 HOH A 22 522 138 HOH HOH . J 7 HOH A 23 523 55 HOH HOH . J 7 HOH A 24 524 141 HOH HOH . J 7 HOH A 25 525 130 HOH HOH . J 7 HOH A 26 526 12 HOH HOH . J 7 HOH A 27 527 92 HOH HOH . J 7 HOH A 28 528 66 HOH HOH . J 7 HOH A 29 529 41 HOH HOH . J 7 HOH A 30 530 118 HOH HOH . J 7 HOH A 31 531 48 HOH HOH . J 7 HOH A 32 532 9 HOH HOH . J 7 HOH A 33 533 131 HOH HOH . J 7 HOH A 34 534 136 HOH HOH . J 7 HOH A 35 535 39 HOH HOH . J 7 HOH A 36 536 17 HOH HOH . J 7 HOH A 37 537 19 HOH HOH . J 7 HOH A 38 538 22 HOH HOH . J 7 HOH A 39 539 120 HOH HOH . J 7 HOH A 40 540 42 HOH HOH . J 7 HOH A 41 541 135 HOH HOH . J 7 HOH A 42 542 10 HOH HOH . J 7 HOH A 43 543 139 HOH HOH . J 7 HOH A 44 544 29 HOH HOH . J 7 HOH A 45 545 65 HOH HOH . J 7 HOH A 46 546 23 HOH HOH . J 7 HOH A 47 547 122 HOH HOH . J 7 HOH A 48 548 36 HOH HOH . J 7 HOH A 49 549 94 HOH HOH . J 7 HOH A 50 550 43 HOH HOH . J 7 HOH A 51 551 25 HOH HOH . J 7 HOH A 52 552 140 HOH HOH . J 7 HOH A 53 553 114 HOH HOH . J 7 HOH A 54 554 58 HOH HOH . J 7 HOH A 55 555 137 HOH HOH . J 7 HOH A 56 556 47 HOH HOH . J 7 HOH A 57 557 103 HOH HOH . J 7 HOH A 58 558 57 HOH HOH . J 7 HOH A 59 559 53 HOH HOH . J 7 HOH A 60 560 112 HOH HOH . J 7 HOH A 61 561 124 HOH HOH . J 7 HOH A 62 562 100 HOH HOH . J 7 HOH A 63 563 93 HOH HOH . J 7 HOH A 64 564 83 HOH HOH . J 7 HOH A 65 565 110 HOH HOH . J 7 HOH A 66 566 34 HOH HOH . J 7 HOH A 67 567 119 HOH HOH . J 7 HOH A 68 568 132 HOH HOH . J 7 HOH A 69 569 80 HOH HOH . J 7 HOH A 70 570 86 HOH HOH . J 7 HOH A 71 571 76 HOH HOH . J 7 HOH A 72 572 115 HOH HOH . J 7 HOH A 73 573 20 HOH HOH . J 7 HOH A 74 574 90 HOH HOH . J 7 HOH A 75 575 108 HOH HOH . J 7 HOH A 76 576 71 HOH HOH . J 7 HOH A 77 577 111 HOH HOH . J 7 HOH A 78 578 54 HOH HOH . J 7 HOH A 79 579 49 HOH HOH . J 7 HOH A 80 580 40 HOH HOH . J 7 HOH A 81 581 61 HOH HOH . J 7 HOH A 82 582 37 HOH HOH . J 7 HOH A 83 583 38 HOH HOH . J 7 HOH A 84 584 109 HOH HOH . J 7 HOH A 85 585 15 HOH HOH . J 7 HOH A 86 586 70 HOH HOH . J 7 HOH A 87 587 75 HOH HOH . J 7 HOH A 88 588 52 HOH HOH . J 7 HOH A 89 589 31 HOH HOH . J 7 HOH A 90 590 126 HOH HOH . J 7 HOH A 91 591 73 HOH HOH . J 7 HOH A 92 592 117 HOH HOH . J 7 HOH A 93 593 32 HOH HOH . J 7 HOH A 94 594 101 HOH HOH . J 7 HOH A 95 595 129 HOH HOH . J 7 HOH A 96 596 89 HOH HOH . J 7 HOH A 97 597 104 HOH HOH . J 7 HOH A 98 598 79 HOH HOH . J 7 HOH A 99 599 99 HOH HOH . J 7 HOH A 100 600 59 HOH HOH . J 7 HOH A 101 601 142 HOH HOH . J 7 HOH A 102 602 30 HOH HOH . J 7 HOH A 103 603 116 HOH HOH . J 7 HOH A 104 604 78 HOH HOH . J 7 HOH A 105 605 87 HOH HOH . J 7 HOH A 106 606 98 HOH HOH . J 7 HOH A 107 607 35 HOH HOH . J 7 HOH A 108 608 95 HOH HOH . J 7 HOH A 109 609 91 HOH HOH . J 7 HOH A 110 610 51 HOH HOH . J 7 HOH A 111 611 56 HOH HOH . J 7 HOH A 112 612 84 HOH HOH . J 7 HOH A 113 613 127 HOH HOH . J 7 HOH A 114 614 74 HOH HOH . J 7 HOH A 115 615 88 HOH HOH . J 7 HOH A 116 616 125 HOH HOH . J 7 HOH A 117 617 102 HOH HOH . J 7 HOH A 118 618 82 HOH HOH . J 7 HOH A 119 619 96 HOH HOH . J 7 HOH A 120 620 123 HOH HOH . J 7 HOH A 121 621 69 HOH HOH . J 7 HOH A 122 622 67 HOH HOH . J 7 HOH A 123 623 24 HOH HOH . J 7 HOH A 124 624 85 HOH HOH . J 7 HOH A 125 625 113 HOH HOH . J 7 HOH A 126 626 46 HOH HOH . J 7 HOH A 127 627 45 HOH HOH . J 7 HOH A 128 628 133 HOH HOH . J 7 HOH A 129 629 72 HOH HOH . J 7 HOH A 130 630 44 HOH HOH . J 7 HOH A 131 631 77 HOH HOH . J 7 HOH A 132 632 60 HOH HOH . J 7 HOH A 133 633 106 HOH HOH . J 7 HOH A 134 634 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 4 -9.163 28.933 -22.909 1 24.4 ? C ACT 403 A 1 HETATM 2 O O ACT . . . D 4 -8.284 29.618 -23.469 1 30.85 ? O ACT 403 A 1 HETATM 3 O OXT ACT . . . D 4 -8.887 28.322 -21.878 1 30.97 ? OXT ACT 403 A 1 HETATM 4 C CH3 ACT . . . D 4 -10.549 28.816 -23.471 1 24.98 ? CH3 ACT 403 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #