data_5MT4 # _model_server_result.job_id GJyPEfDSCSYrPduNNJS_Ww _model_server_result.datetime_utc '2024-10-19 11:29:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mt4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5MT4 # _exptl.entry_id 5MT4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.283 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(phenylmethyl)carbamoylamino]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.93 _cell.angle_gamma 90 _cell.entry_id 5MT4 _cell.length_a 55.476 _cell.length_b 50.839 _cell.length_c 39.366 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MT4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 42 1_555 A SG CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? disulf ? disulf2 A SG CYS 123 A CYS 136 1_555 A SG CYS 189 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 154 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf4 A SG CYS 179 A CYS 191 1_555 A SG CYS 204 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C15 H14 N2 O3' _chem_comp.formula_weight 270.283 _chem_comp.id M7O _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(phenylmethyl)carbamoylamino]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C23 M7O doub 218 n y C25 C27 M7O sing 219 n y C23 C22 M7O sing 220 n y C27 C29 M7O doub 221 n y O33 C31 M7O doub 222 n n C22 C31 M7O sing 223 n n C22 C21 M7O doub 224 n y C29 C21 M7O sing 225 n y C31 O32 M7O sing 226 n n C21 N19 M7O sing 227 n n N19 C17 M7O sing 228 n n O18 C17 M7O doub 229 n n C17 N1 M7O sing 230 n n N1 C3 M7O sing 231 n n C3 C6 M7O sing 232 n n C15 C6 M7O doub 233 n y C15 C13 M7O sing 234 n y C6 C7 M7O sing 235 n y C13 C11 M7O doub 236 n y C7 C9 M7O doub 237 n y C11 C9 M7O sing 238 n y C3 H1 M7O sing 239 n n C3 H2 M7O sing 240 n n C11 H3 M7O sing 241 n n C13 H4 M7O sing 242 n n C15 H5 M7O sing 243 n n C23 H6 M7O sing 244 n n C25 H7 M7O sing 245 n n C27 H8 M7O sing 246 n n C29 H9 M7O sing 247 n n N1 H10 M7O sing 248 n n C7 H11 M7O sing 249 n n C9 H12 M7O sing 250 n n N19 H13 M7O sing 251 n n O32 H14 M7O sing 252 n n # _atom_sites.entry_id 5MT4 _atom_sites.fract_transf_matrix[1][1] 0.018026 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004805 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01967 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 M7O A 1 301 1 M7O LI1 . C 3 HOH A 1 401 13 HOH HOH . C 3 HOH A 2 402 41 HOH HOH . C 3 HOH A 3 403 54 HOH HOH . C 3 HOH A 4 404 57 HOH HOH . C 3 HOH A 5 405 58 HOH HOH . C 3 HOH A 6 406 29 HOH HOH . C 3 HOH A 7 407 49 HOH HOH . C 3 HOH A 8 408 31 HOH HOH . C 3 HOH A 9 409 63 HOH HOH . C 3 HOH A 10 410 44 HOH HOH . C 3 HOH A 11 411 66 HOH HOH . C 3 HOH A 12 412 45 HOH HOH . C 3 HOH A 13 413 27 HOH HOH . C 3 HOH A 14 414 19 HOH HOH . C 3 HOH A 15 415 65 HOH HOH . C 3 HOH A 16 416 18 HOH HOH . C 3 HOH A 17 417 4 HOH HOH . C 3 HOH A 18 418 16 HOH HOH . C 3 HOH A 19 419 33 HOH HOH . C 3 HOH A 20 420 11 HOH HOH . C 3 HOH A 21 421 5 HOH HOH . C 3 HOH A 22 422 32 HOH HOH . C 3 HOH A 23 423 67 HOH HOH . C 3 HOH A 24 424 40 HOH HOH . C 3 HOH A 25 425 62 HOH HOH . C 3 HOH A 26 426 17 HOH HOH . C 3 HOH A 27 427 22 HOH HOH . C 3 HOH A 28 428 56 HOH HOH . C 3 HOH A 29 429 60 HOH HOH . C 3 HOH A 30 430 47 HOH HOH . C 3 HOH A 31 431 7 HOH HOH . C 3 HOH A 32 432 36 HOH HOH . C 3 HOH A 33 433 8 HOH HOH . C 3 HOH A 34 434 3 HOH HOH . C 3 HOH A 35 435 53 HOH HOH . C 3 HOH A 36 436 38 HOH HOH . C 3 HOH A 37 437 52 HOH HOH . C 3 HOH A 38 438 12 HOH HOH . C 3 HOH A 39 439 10 HOH HOH . C 3 HOH A 40 440 68 HOH HOH . C 3 HOH A 41 441 14 HOH HOH . C 3 HOH A 42 442 34 HOH HOH . C 3 HOH A 43 443 6 HOH HOH . C 3 HOH A 44 444 2 HOH HOH . C 3 HOH A 45 445 43 HOH HOH . C 3 HOH A 46 446 35 HOH HOH . C 3 HOH A 47 447 51 HOH HOH . C 3 HOH A 48 448 42 HOH HOH . C 3 HOH A 49 449 39 HOH HOH . C 3 HOH A 50 450 15 HOH HOH . C 3 HOH A 51 451 59 HOH HOH . C 3 HOH A 52 452 64 HOH HOH . C 3 HOH A 53 453 26 HOH HOH . C 3 HOH A 54 454 28 HOH HOH . C 3 HOH A 55 455 61 HOH HOH . C 3 HOH A 56 456 24 HOH HOH . C 3 HOH A 57 457 30 HOH HOH . C 3 HOH A 58 458 55 HOH HOH . C 3 HOH A 59 459 9 HOH HOH . C 3 HOH A 60 460 48 HOH HOH . C 3 HOH A 61 461 25 HOH HOH . C 3 HOH A 62 462 20 HOH HOH . C 3 HOH A 63 463 21 HOH HOH . C 3 HOH A 64 464 50 HOH HOH . C 3 HOH A 65 465 46 HOH HOH . C 3 HOH A 66 466 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 M7O . . . B 2 9.203 11.174 7.65 1 38.94 ? C3 M7O 301 A 1 HETATM 2 C C11 M7O . . . B 2 7.804 8.104 10.528 1 38.88 ? C11 M7O 301 A 1 HETATM 3 C C13 M7O . . . B 2 7.002 8.507 9.442 1 39.91 ? C13 M7O 301 A 1 HETATM 4 C C15 M7O . . . B 2 7.419 9.486 8.516 1 39.47 ? C15 M7O 301 A 1 HETATM 5 C C17 M7O . . . B 2 9.37 10.964 5.169 1 35.01 ? C17 M7O 301 A 1 HETATM 6 C C21 M7O . . . B 2 9.748 10.42 2.744 1 35.26 ? C21 M7O 301 A 1 HETATM 7 C C22 M7O . . . B 2 9.198 9.446 1.906 1 33.99 ? C22 M7O 301 A 1 HETATM 8 C C23 M7O . . . B 2 9.125 9.67 0.494 1 34.99 ? C23 M7O 301 A 1 HETATM 9 C C25 M7O . . . B 2 9.585 10.882 -0.081 1 38.34 ? C25 M7O 301 A 1 HETATM 10 C C27 M7O . . . B 2 10.154 11.851 0.761 1 38.39 ? C27 M7O 301 A 1 HETATM 11 C C29 M7O . . . B 2 10.225 11.637 2.152 1 38.23 ? C29 M7O 301 A 1 HETATM 12 N N1 M7O . . . B 2 9.635 10.5 6.424 1 35.88 ? N1 M7O 301 A 1 HETATM 13 C C6 M7O . . . B 2 8.683 10.111 8.662 1 38.57 ? C6 M7O 301 A 1 HETATM 14 C C7 M7O . . . B 2 9.473 9.752 9.772 1 38.03 ? C7 M7O 301 A 1 HETATM 15 C C9 M7O . . . B 2 9.029 8.744 10.701 1 39.89 ? C9 M7O 301 A 1 HETATM 16 O O18 M7O . . . B 2 8.8 12.092 5.001 1 37.94 ? O18 M7O 301 A 1 HETATM 17 N N19 M7O . . . B 2 9.834 10.155 4.153 1 34.72 ? N19 M7O 301 A 1 HETATM 18 C C31 M7O . . . B 2 8.65 8.157 2.454 1 30.79 ? C31 M7O 301 A 1 HETATM 19 O O32 M7O . . . B 2 8.759 7.774 3.618 1 31.86 ? O32 M7O 301 A 1 HETATM 20 O O33 M7O . . . B 2 7.973 7.417 1.58 1 36.41 ? O33 M7O 301 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #