data_5MUE # _model_server_result.job_id xg1_rWN4AJN268rmyT1PPw _model_server_result.datetime_utc '2024-11-24 18:34:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mue # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5MUE # _exptl.entry_id 5MUE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 430.706 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MUE _cell.length_a 168.184 _cell.length_b 168.184 _cell.length_c 168.184 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MUE _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H50 O2' _chem_comp.formula_weight 430.706 _chem_comp.id VIV _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C4 VIV sing 390 n n O1 C9 VIV sing 391 n n O2 C7 VIV sing 392 n n O2 HO21 VIV sing 393 n n C1 C23 VIV sing 394 n n C1 HC11 VIV sing 395 n n C1 HC12 VIV sing 396 n n C1 HC13 VIV sing 397 n n C2 C3 VIV doub 398 n y C2 C7 VIV sing 399 n y C2 C8 VIV sing 400 n n C3 C4 VIV sing 401 n y C3 C10 VIV sing 402 n n C4 C5 VIV doub 403 n y C5 C6 VIV sing 404 n y C5 C12 VIV sing 405 n n C6 C7 VIV doub 406 n y C6 C13 VIV sing 407 n n C8 HC81 VIV sing 408 n n C8 HC82 VIV sing 409 n n C8 HC83 VIV sing 410 n n C9 C11 VIV sing 411 n n C9 C14 VIV sing 412 n n C9 C15 VIV sing 413 n n C10 C11 VIV sing 414 n n C10 H101 VIV sing 415 n n C10 H102 VIV sing 416 n n C11 H111 VIV sing 417 n n C11 H112 VIV sing 418 n n C12 H121 VIV sing 419 n n C12 H122 VIV sing 420 n n C12 H123 VIV sing 421 n n C13 H131 VIV sing 422 n n C13 H132 VIV sing 423 n n C13 H133 VIV sing 424 n n C14 H141 VIV sing 425 n n C14 H142 VIV sing 426 n n C14 H143 VIV sing 427 n n C15 C16 VIV sing 428 n n C15 H151 VIV sing 429 n n C15 H152 VIV sing 430 n n C16 C17 VIV sing 431 n n C16 H161 VIV sing 432 n n C16 H162 VIV sing 433 n n C17 C18 VIV sing 434 n n C17 H171 VIV sing 435 n n C17 H172 VIV sing 436 n n C18 C19 VIV sing 437 n n C18 C20 VIV sing 438 n n C18 H18 VIV sing 439 n n C19 H191 VIV sing 440 n n C19 H192 VIV sing 441 n n C19 H193 VIV sing 442 n n C20 C21 VIV sing 443 n n C20 H201 VIV sing 444 n n C20 H202 VIV sing 445 n n C21 C22 VIV sing 446 n n C21 H211 VIV sing 447 n n C21 H212 VIV sing 448 n n C22 C23 VIV sing 449 n n C22 H221 VIV sing 450 n n C22 H222 VIV sing 451 n n C23 C24 VIV sing 452 n n C23 H23 VIV sing 453 n n C24 C25 VIV sing 454 n n C24 H241 VIV sing 455 n n C24 H242 VIV sing 456 n n C25 C26 VIV sing 457 n n C25 H251 VIV sing 458 n n C25 H252 VIV sing 459 n n C26 C27 VIV sing 460 n n C26 H261 VIV sing 461 n n C26 H262 VIV sing 462 n n C27 C28 VIV sing 463 n n C27 C29 VIV sing 464 n n C27 H27 VIV sing 465 n n C28 H281 VIV sing 466 n n C28 H282 VIV sing 467 n n C28 H283 VIV sing 468 n n C29 H291 VIV sing 469 n n C29 H292 VIV sing 470 n n C29 H293 VIV sing 471 n n # _atom_sites.entry_id 5MUE _atom_sites.fract_transf_matrix[1][1] 0.005946 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 1 SO4 SO4 . C 3 VIV A 1 302 1278 VIV VIV . D 4 CL A 1 303 1 CL CL . E 5 ETA A 1 304 1 ETA TRS . F 6 HOH A 1 401 44 HOH HOH . F 6 HOH A 2 402 38 HOH HOH . F 6 HOH A 3 403 22 HOH HOH . F 6 HOH A 4 404 5 HOH HOH . F 6 HOH A 5 405 64 HOH HOH . F 6 HOH A 6 406 20 HOH HOH . F 6 HOH A 7 407 13 HOH HOH . F 6 HOH A 8 408 36 HOH HOH . F 6 HOH A 9 409 55 HOH HOH . F 6 HOH A 10 410 30 HOH HOH . F 6 HOH A 11 411 6 HOH HOH . F 6 HOH A 12 412 14 HOH HOH . F 6 HOH A 13 413 1 HOH HOH . F 6 HOH A 14 414 56 HOH HOH . F 6 HOH A 15 415 17 HOH HOH . F 6 HOH A 16 416 29 HOH HOH . F 6 HOH A 17 417 19 HOH HOH . F 6 HOH A 18 418 21 HOH HOH . F 6 HOH A 19 419 15 HOH HOH . F 6 HOH A 20 420 65 HOH HOH . F 6 HOH A 21 421 10 HOH HOH . F 6 HOH A 22 422 2 HOH HOH . F 6 HOH A 23 423 49 HOH HOH . F 6 HOH A 24 424 23 HOH HOH . F 6 HOH A 25 425 16 HOH HOH . F 6 HOH A 26 426 40 HOH HOH . F 6 HOH A 27 427 50 HOH HOH . F 6 HOH A 28 428 57 HOH HOH . F 6 HOH A 29 429 59 HOH HOH . F 6 HOH A 30 430 4 HOH HOH . F 6 HOH A 31 431 51 HOH HOH . F 6 HOH A 32 432 37 HOH HOH . F 6 HOH A 33 433 9 HOH HOH . F 6 HOH A 34 434 11 HOH HOH . F 6 HOH A 35 435 60 HOH HOH . F 6 HOH A 36 436 41 HOH HOH . F 6 HOH A 37 437 8 HOH HOH . F 6 HOH A 38 438 26 HOH HOH . F 6 HOH A 39 439 39 HOH HOH . F 6 HOH A 40 440 45 HOH HOH . F 6 HOH A 41 441 52 HOH HOH . F 6 HOH A 42 442 18 HOH HOH . F 6 HOH A 43 443 12 HOH HOH . F 6 HOH A 44 444 7 HOH HOH . F 6 HOH A 45 445 54 HOH HOH . F 6 HOH A 46 446 53 HOH HOH . F 6 HOH A 47 447 35 HOH HOH . F 6 HOH A 48 448 3 HOH HOH . F 6 HOH A 49 449 28 HOH HOH . F 6 HOH A 50 450 34 HOH HOH . F 6 HOH A 51 451 27 HOH HOH . F 6 HOH A 52 452 62 HOH HOH . F 6 HOH A 53 453 42 HOH HOH . F 6 HOH A 54 454 24 HOH HOH . F 6 HOH A 55 455 32 HOH HOH . F 6 HOH A 56 456 25 HOH HOH . F 6 HOH A 57 457 63 HOH HOH . F 6 HOH A 58 458 31 HOH HOH . F 6 HOH A 59 459 58 HOH HOH . F 6 HOH A 60 460 46 HOH HOH . F 6 HOH A 61 461 48 HOH HOH . F 6 HOH A 62 462 33 HOH HOH . F 6 HOH A 63 463 47 HOH HOH . F 6 HOH A 64 464 61 HOH HOH . F 6 HOH A 65 465 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 VIV . . . C 3 11.98 -48.574 26.393 1 42.92 ? O1 VIV 302 A 1 HETATM 2 O O2 VIV . . . C 3 16.533 -47.497 23.214 1 40.93 ? O2 VIV 302 A 1 HETATM 3 C C1 VIV . . . C 3 4.254 -51.387 23.573 1 48.46 ? C1 VIV 302 A 1 HETATM 4 C C2 VIV . . . C 3 14.471 -48.731 23.576 1 40.68 ? C2 VIV 302 A 1 HETATM 5 C C3 VIV . . . C 3 13.331 -49.008 24.366 1 41.56 ? C3 VIV 302 A 1 HETATM 6 C C4 VIV . . . C 3 13.127 -48.321 25.561 1 41.41 ? C4 VIV 302 A 1 HETATM 7 C C5 VIV . . . C 3 14.068 -47.351 25.987 1 41.37 ? C5 VIV 302 A 1 HETATM 8 C C6 VIV . . . C 3 15.195 -47.078 25.21 1 41.63 ? C6 VIV 302 A 1 HETATM 9 C C7 VIV . . . C 3 15.398 -47.771 23.999 1 40.89 ? C7 VIV 302 A 1 HETATM 10 C C8 VIV . . . C 3 14.689 -49.477 22.278 1 39.42 ? C8 VIV 302 A 1 HETATM 11 C C9 VIV . . . C 3 10.891 -49.232 25.783 1 45.58 ? C9 VIV 302 A 1 HETATM 12 C C10 VIV . . . C 3 12.325 -50.065 23.885 1 42.16 ? C10 VIV 302 A 1 HETATM 13 C C11 VIV . . . C 3 11.278 -50.397 24.908 1 43.65 ? C11 VIV 302 A 1 HETATM 14 C C12 VIV . . . C 3 13.845 -46.611 27.288 1 40.16 ? C12 VIV 302 A 1 HETATM 15 C C13 VIV . . . C 3 16.196 -46.038 25.668 1 40.05 ? C13 VIV 302 A 1 HETATM 16 C C14 VIV . . . C 3 10.105 -48.23 24.961 1 44.79 ? C14 VIV 302 A 1 HETATM 17 C C15 VIV . . . C 3 9.999 -49.766 26.917 1 46.82 ? C15 VIV 302 A 1 HETATM 18 C C16 VIV . . . C 3 8.582 -50.069 26.484 1 48.2 ? C16 VIV 302 A 1 HETATM 19 C C17 VIV . . . C 3 7.644 -50.149 27.667 1 49.37 ? C17 VIV 302 A 1 HETATM 20 C C18 VIV . . . C 3 6.402 -50.962 27.371 1 50.64 ? C18 VIV 302 A 1 HETATM 21 C C19 VIV . . . C 3 5.689 -51.283 28.667 1 51.17 ? C19 VIV 302 A 1 HETATM 22 C C20 VIV . . . C 3 6.788 -52.24 26.654 1 49.51 ? C20 VIV 302 A 1 HETATM 23 C C21 VIV . . . C 3 5.65 -53.236 26.555 1 50.44 ? C21 VIV 302 A 1 HETATM 24 C C22 VIV . . . C 3 4.677 -52.952 25.427 1 50.38 ? C22 VIV 302 A 1 HETATM 25 C C23 VIV . . . C 3 5.296 -52.271 24.223 1 49.24 ? C23 VIV 302 A 1 HETATM 26 C C24 VIV . . . C 3 5.776 -53.315 23.235 1 48.63 ? C24 VIV 302 A 1 HETATM 27 C C25 VIV . . . C 3 6.335 -52.718 21.959 1 47.95 ? C25 VIV 302 A 1 HETATM 28 C C26 VIV . . . C 3 7.562 -51.862 22.192 1 46.98 ? C26 VIV 302 A 1 HETATM 29 C C27 VIV . . . C 3 8.279 -51.521 20.902 1 48.27 ? C27 VIV 302 A 1 HETATM 30 C C28 VIV . . . C 3 7.336 -50.922 19.881 1 48.4 ? C28 VIV 302 A 1 HETATM 31 C C29 VIV . . . C 3 9.458 -50.607 21.155 1 46.87 ? C29 VIV 302 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 31 #