data_5MUL # _model_server_result.job_id GjCEUtseeMR8Ayjt0ctelA _model_server_result.datetime_utc '2024-11-05 01:15:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mul # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5MUL # _exptl.entry_id 5MUL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.139 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'beta-D-glucopyranuronic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5MUL _cell.length_a 120.178 _cell.length_b 120.178 _cell.length_c 52.651 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MUL _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H10 O7' _chem_comp.formula_weight 194.139 _chem_comp.id BDP _chem_comp.mon_nstd_flag . _chem_comp.name 'beta-D-glucopyranuronic acid' _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms 'beta-D-glucuronic acid;D-glucuronic acid;glucuronic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BDP sing 70 n n C1 O5 BDP sing 71 n n C1 O1 BDP sing 72 n n C1 H1 BDP sing 73 n n C2 C3 BDP sing 74 n n C2 O2 BDP sing 75 n n C2 H2 BDP sing 76 n n C3 C4 BDP sing 77 n n C3 O3 BDP sing 78 n n C3 H3 BDP sing 79 n n C4 C5 BDP sing 80 n n C4 O4 BDP sing 81 n n C4 H4 BDP sing 82 n n C5 C6 BDP sing 83 n n C5 O5 BDP sing 84 n n C5 H5 BDP sing 85 n n C6 O6A BDP doub 86 n n C6 O6B BDP sing 87 n n O2 HO2 BDP sing 88 n n O3 HO3 BDP sing 89 n n O4 HO4 BDP sing 90 n n O1 HO1 BDP sing 91 n n O6B HO6B BDP sing 92 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BDP DGlcpAb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BDP 'b-D-glucopyranuronic acid' 'COMMON NAME' GMML 1 BDP b-D-GlcpA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BDP GlcA 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 5MUL _atom_sites.fract_transf_matrix[1][1] 0.008321 _atom_sites.fract_transf_matrix[1][2] 0.004804 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009608 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018993 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BDP A 1 501 1 BDP BDP . C 3 HOH A 1 601 112 HOH HOH . C 3 HOH A 2 602 332 HOH HOH . C 3 HOH A 3 603 183 HOH HOH . C 3 HOH A 4 604 123 HOH HOH . C 3 HOH A 5 605 356 HOH HOH . C 3 HOH A 6 606 364 HOH HOH . C 3 HOH A 7 607 290 HOH HOH . C 3 HOH A 8 608 230 HOH HOH . C 3 HOH A 9 609 131 HOH HOH . C 3 HOH A 10 610 361 HOH HOH . C 3 HOH A 11 611 287 HOH HOH . C 3 HOH A 12 612 357 HOH HOH . C 3 HOH A 13 613 258 HOH HOH . C 3 HOH A 14 614 115 HOH HOH . C 3 HOH A 15 615 329 HOH HOH . C 3 HOH A 16 616 253 HOH HOH . C 3 HOH A 17 617 261 HOH HOH . C 3 HOH A 18 618 137 HOH HOH . C 3 HOH A 19 619 354 HOH HOH . C 3 HOH A 20 620 250 HOH HOH . C 3 HOH A 21 621 63 HOH HOH . C 3 HOH A 22 622 299 HOH HOH . C 3 HOH A 23 623 159 HOH HOH . C 3 HOH A 24 624 213 HOH HOH . C 3 HOH A 25 625 165 HOH HOH . C 3 HOH A 26 626 141 HOH HOH . C 3 HOH A 27 627 164 HOH HOH . C 3 HOH A 28 628 360 HOH HOH . C 3 HOH A 29 629 349 HOH HOH . C 3 HOH A 30 630 43 HOH HOH . C 3 HOH A 31 631 229 HOH HOH . C 3 HOH A 32 632 40 HOH HOH . C 3 HOH A 33 633 320 HOH HOH . C 3 HOH A 34 634 117 HOH HOH . C 3 HOH A 35 635 217 HOH HOH . C 3 HOH A 36 636 302 HOH HOH . C 3 HOH A 37 637 309 HOH HOH . C 3 HOH A 38 638 185 HOH HOH . C 3 HOH A 39 639 74 HOH HOH . C 3 HOH A 40 640 15 HOH HOH . C 3 HOH A 41 641 80 HOH HOH . C 3 HOH A 42 642 171 HOH HOH . C 3 HOH A 43 643 114 HOH HOH . C 3 HOH A 44 644 4 HOH HOH . C 3 HOH A 45 645 111 HOH HOH . C 3 HOH A 46 646 268 HOH HOH . C 3 HOH A 47 647 20 HOH HOH . C 3 HOH A 48 648 39 HOH HOH . C 3 HOH A 49 649 50 HOH HOH . C 3 HOH A 50 650 27 HOH HOH . C 3 HOH A 51 651 12 HOH HOH . C 3 HOH A 52 652 355 HOH HOH . C 3 HOH A 53 653 116 HOH HOH . C 3 HOH A 54 654 100 HOH HOH . C 3 HOH A 55 655 31 HOH HOH . C 3 HOH A 56 656 181 HOH HOH . C 3 HOH A 57 657 344 HOH HOH . C 3 HOH A 58 658 252 HOH HOH . C 3 HOH A 59 659 51 HOH HOH . C 3 HOH A 60 660 132 HOH HOH . C 3 HOH A 61 661 238 HOH HOH . C 3 HOH A 62 662 222 HOH HOH . C 3 HOH A 63 663 146 HOH HOH . C 3 HOH A 64 664 76 HOH HOH . C 3 HOH A 65 665 151 HOH HOH . C 3 HOH A 66 666 1 HOH HOH . C 3 HOH A 67 667 285 HOH HOH . C 3 HOH A 68 668 313 HOH HOH . C 3 HOH A 69 669 317 HOH HOH . C 3 HOH A 70 670 24 HOH HOH . C 3 HOH A 71 671 134 HOH HOH . C 3 HOH A 72 672 241 HOH HOH . C 3 HOH A 73 673 10 HOH HOH . C 3 HOH A 74 674 107 HOH HOH . C 3 HOH A 75 675 196 HOH HOH . C 3 HOH A 76 676 23 HOH HOH . C 3 HOH A 77 677 42 HOH HOH . C 3 HOH A 78 678 331 HOH HOH . C 3 HOH A 79 679 359 HOH HOH . C 3 HOH A 80 680 154 HOH HOH . C 3 HOH A 81 681 83 HOH HOH . C 3 HOH A 82 682 99 HOH HOH . C 3 HOH A 83 683 64 HOH HOH . C 3 HOH A 84 684 8 HOH HOH . C 3 HOH A 85 685 85 HOH HOH . C 3 HOH A 86 686 46 HOH HOH . C 3 HOH A 87 687 118 HOH HOH . C 3 HOH A 88 688 53 HOH HOH . C 3 HOH A 89 689 144 HOH HOH . C 3 HOH A 90 690 292 HOH HOH . C 3 HOH A 91 691 56 HOH HOH . C 3 HOH A 92 692 312 HOH HOH . C 3 HOH A 93 693 58 HOH HOH . C 3 HOH A 94 694 236 HOH HOH . C 3 HOH A 95 695 206 HOH HOH . C 3 HOH A 96 696 36 HOH HOH . C 3 HOH A 97 697 119 HOH HOH . C 3 HOH A 98 698 205 HOH HOH . C 3 HOH A 99 699 231 HOH HOH . C 3 HOH A 100 700 269 HOH HOH . C 3 HOH A 101 701 182 HOH HOH . C 3 HOH A 102 702 362 HOH HOH . C 3 HOH A 103 703 346 HOH HOH . C 3 HOH A 104 704 172 HOH HOH . C 3 HOH A 105 705 347 HOH HOH . C 3 HOH A 106 706 77 HOH HOH . C 3 HOH A 107 707 5 HOH HOH . C 3 HOH A 108 708 162 HOH HOH . C 3 HOH A 109 709 336 HOH HOH . C 3 HOH A 110 710 96 HOH HOH . C 3 HOH A 111 711 79 HOH HOH . C 3 HOH A 112 712 89 HOH HOH . C 3 HOH A 113 713 3 HOH HOH . C 3 HOH A 114 714 175 HOH HOH . C 3 HOH A 115 715 135 HOH HOH . C 3 HOH A 116 716 161 HOH HOH . C 3 HOH A 117 717 341 HOH HOH . C 3 HOH A 118 718 150 HOH HOH . C 3 HOH A 119 719 199 HOH HOH . C 3 HOH A 120 720 203 HOH HOH . C 3 HOH A 121 721 234 HOH HOH . C 3 HOH A 122 722 113 HOH HOH . C 3 HOH A 123 723 219 HOH HOH . C 3 HOH A 124 724 211 HOH HOH . C 3 HOH A 125 725 130 HOH HOH . C 3 HOH A 126 726 239 HOH HOH . C 3 HOH A 127 727 87 HOH HOH . C 3 HOH A 128 728 94 HOH HOH . C 3 HOH A 129 729 75 HOH HOH . C 3 HOH A 130 730 30 HOH HOH . C 3 HOH A 131 731 174 HOH HOH . C 3 HOH A 132 732 289 HOH HOH . C 3 HOH A 133 733 103 HOH HOH . C 3 HOH A 134 734 276 HOH HOH . C 3 HOH A 135 735 246 HOH HOH . C 3 HOH A 136 736 9 HOH HOH . C 3 HOH A 137 737 13 HOH HOH . C 3 HOH A 138 738 14 HOH HOH . C 3 HOH A 139 739 45 HOH HOH . C 3 HOH A 140 740 335 HOH HOH . C 3 HOH A 141 741 33 HOH HOH . C 3 HOH A 142 742 21 HOH HOH . C 3 HOH A 143 743 38 HOH HOH . C 3 HOH A 144 744 68 HOH HOH . C 3 HOH A 145 745 178 HOH HOH . C 3 HOH A 146 746 343 HOH HOH . C 3 HOH A 147 747 70 HOH HOH . C 3 HOH A 148 748 101 HOH HOH . C 3 HOH A 149 749 167 HOH HOH . C 3 HOH A 150 750 147 HOH HOH . C 3 HOH A 151 751 2 HOH HOH . C 3 HOH A 152 752 227 HOH HOH . C 3 HOH A 153 753 57 HOH HOH . C 3 HOH A 154 754 105 HOH HOH . C 3 HOH A 155 755 19 HOH HOH . C 3 HOH A 156 756 243 HOH HOH . C 3 HOH A 157 757 110 HOH HOH . C 3 HOH A 158 758 98 HOH HOH . C 3 HOH A 159 759 91 HOH HOH . C 3 HOH A 160 760 322 HOH HOH . C 3 HOH A 161 761 18 HOH HOH . C 3 HOH A 162 762 138 HOH HOH . C 3 HOH A 163 763 86 HOH HOH . C 3 HOH A 164 764 7 HOH HOH . C 3 HOH A 165 765 88 HOH HOH . C 3 HOH A 166 766 82 HOH HOH . C 3 HOH A 167 767 187 HOH HOH . C 3 HOH A 168 768 11 HOH HOH . C 3 HOH A 169 769 54 HOH HOH . C 3 HOH A 170 770 328 HOH HOH . C 3 HOH A 171 771 6 HOH HOH . C 3 HOH A 172 772 148 HOH HOH . C 3 HOH A 173 773 142 HOH HOH . C 3 HOH A 174 774 160 HOH HOH . C 3 HOH A 175 775 139 HOH HOH . C 3 HOH A 176 776 121 HOH HOH . C 3 HOH A 177 777 311 HOH HOH . C 3 HOH A 178 778 145 HOH HOH . C 3 HOH A 179 779 152 HOH HOH . C 3 HOH A 180 780 179 HOH HOH . C 3 HOH A 181 781 16 HOH HOH . C 3 HOH A 182 782 104 HOH HOH . C 3 HOH A 183 783 67 HOH HOH . C 3 HOH A 184 784 166 HOH HOH . C 3 HOH A 185 785 218 HOH HOH . C 3 HOH A 186 786 358 HOH HOH . C 3 HOH A 187 787 72 HOH HOH . C 3 HOH A 188 788 65 HOH HOH . C 3 HOH A 189 789 316 HOH HOH . C 3 HOH A 190 790 108 HOH HOH . C 3 HOH A 191 791 156 HOH HOH . C 3 HOH A 192 792 136 HOH HOH . C 3 HOH A 193 793 92 HOH HOH . C 3 HOH A 194 794 264 HOH HOH . C 3 HOH A 195 795 333 HOH HOH . C 3 HOH A 196 796 210 HOH HOH . C 3 HOH A 197 797 260 HOH HOH . C 3 HOH A 198 798 168 HOH HOH . C 3 HOH A 199 799 257 HOH HOH . C 3 HOH A 200 800 291 HOH HOH . C 3 HOH A 201 801 37 HOH HOH . C 3 HOH A 202 802 251 HOH HOH . C 3 HOH A 203 803 149 HOH HOH . C 3 HOH A 204 804 17 HOH HOH . C 3 HOH A 205 805 28 HOH HOH . C 3 HOH A 206 806 41 HOH HOH . C 3 HOH A 207 807 345 HOH HOH . C 3 HOH A 208 808 143 HOH HOH . C 3 HOH A 209 809 47 HOH HOH . C 3 HOH A 210 810 129 HOH HOH . C 3 HOH A 211 811 52 HOH HOH . C 3 HOH A 212 812 81 HOH HOH . C 3 HOH A 213 813 169 HOH HOH . C 3 HOH A 214 814 353 HOH HOH . C 3 HOH A 215 815 158 HOH HOH . C 3 HOH A 216 816 186 HOH HOH . C 3 HOH A 217 817 84 HOH HOH . C 3 HOH A 218 818 197 HOH HOH . C 3 HOH A 219 819 155 HOH HOH . C 3 HOH A 220 820 66 HOH HOH . C 3 HOH A 221 821 109 HOH HOH . C 3 HOH A 222 822 69 HOH HOH . C 3 HOH A 223 823 59 HOH HOH . C 3 HOH A 224 824 263 HOH HOH . C 3 HOH A 225 825 245 HOH HOH . C 3 HOH A 226 826 338 HOH HOH . C 3 HOH A 227 827 202 HOH HOH . C 3 HOH A 228 828 26 HOH HOH . C 3 HOH A 229 829 315 HOH HOH . C 3 HOH A 230 830 283 HOH HOH . C 3 HOH A 231 831 352 HOH HOH . C 3 HOH A 232 832 49 HOH HOH . C 3 HOH A 233 833 122 HOH HOH . C 3 HOH A 234 834 106 HOH HOH . C 3 HOH A 235 835 62 HOH HOH . C 3 HOH A 236 836 284 HOH HOH . C 3 HOH A 237 837 209 HOH HOH . C 3 HOH A 238 838 327 HOH HOH . C 3 HOH A 239 839 297 HOH HOH . C 3 HOH A 240 840 215 HOH HOH . C 3 HOH A 241 841 275 HOH HOH . C 3 HOH A 242 842 163 HOH HOH . C 3 HOH A 243 843 35 HOH HOH . C 3 HOH A 244 844 153 HOH HOH . C 3 HOH A 245 845 278 HOH HOH . C 3 HOH A 246 846 301 HOH HOH . C 3 HOH A 247 847 180 HOH HOH . C 3 HOH A 248 848 337 HOH HOH . C 3 HOH A 249 849 277 HOH HOH . C 3 HOH A 250 850 184 HOH HOH . C 3 HOH A 251 851 288 HOH HOH . C 3 HOH A 252 852 273 HOH HOH . C 3 HOH A 253 853 325 HOH HOH . C 3 HOH A 254 854 296 HOH HOH . C 3 HOH A 255 855 350 HOH HOH . C 3 HOH A 256 856 124 HOH HOH . C 3 HOH A 257 857 212 HOH HOH . C 3 HOH A 258 858 200 HOH HOH . C 3 HOH A 259 859 365 HOH HOH . C 3 HOH A 260 860 267 HOH HOH . C 3 HOH A 261 861 305 HOH HOH . C 3 HOH A 262 862 232 HOH HOH . C 3 HOH A 263 863 310 HOH HOH . C 3 HOH A 264 864 279 HOH HOH . C 3 HOH A 265 865 177 HOH HOH . C 3 HOH A 266 866 189 HOH HOH . C 3 HOH A 267 867 256 HOH HOH . C 3 HOH A 268 868 308 HOH HOH . C 3 HOH A 269 869 274 HOH HOH . C 3 HOH A 270 870 191 HOH HOH . C 3 HOH A 271 871 294 HOH HOH . C 3 HOH A 272 872 214 HOH HOH . C 3 HOH A 273 873 262 HOH HOH . C 3 HOH A 274 874 254 HOH HOH . C 3 HOH A 275 875 363 HOH HOH . C 3 HOH A 276 876 314 HOH HOH . C 3 HOH A 277 877 221 HOH HOH . C 3 HOH A 278 878 334 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BDP . . . B 2 47.944 37.598 4.746 1 21.89 ? C1 BDP 501 A 1 HETATM 2 C C2 BDP . . . B 2 48.194 36.291 4.009 1 21.58 ? C2 BDP 501 A 1 HETATM 3 C C3 BDP . . . B 2 48.298 35.171 5.043 1 21.53 ? C3 BDP 501 A 1 HETATM 4 C C4 BDP . . . B 2 49.302 35.543 6.145 1 21.65 ? C4 BDP 501 A 1 HETATM 5 C C5 BDP . . . B 2 48.939 36.867 6.782 1 21.5 ? C5 BDP 501 A 1 HETATM 6 C C6 BDP . . . B 2 49.9 37.256 7.871 1 23.94 ? C6 BDP 501 A 1 HETATM 7 O O2 BDP . . . B 2 47.125 35.978 3.099 1 19.51 ? O2 BDP 501 A 1 HETATM 8 O O3 BDP . . . B 2 48.649 33.956 4.39 1 21.71 ? O3 BDP 501 A 1 HETATM 9 O O4 BDP . . . B 2 49.295 34.524 7.141 1 24.17 ? O4 BDP 501 A 1 HETATM 10 O O5 BDP . . . B 2 48.971 37.834 5.739 1 20.88 ? O5 BDP 501 A 1 HETATM 11 O O6A BDP . . . B 2 51.016 37.716 7.544 1 26.22 ? O6A BDP 501 A 1 HETATM 12 O O1 BDP . . . B 2 47.979 38.666 3.799 1 23.45 ? O1 BDP 501 A 1 HETATM 13 O O6B BDP . . . B 2 49.552 37.106 9.061 1 23.22 ? O6B BDP 501 A 1 # _model_server_stats.io_time_ms 115 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 13 #