data_5MXD # _model_server_result.job_id MAo20CGkWJfaZfKORvrZuw _model_server_result.datetime_utc '2024-11-08 16:34:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mxd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 5MXD # _exptl.entry_id 5MXD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 242.32 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N},~{N}-dimethyl-2-pyrrolidin-1-yl-quinazolin-4-amine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.03 _cell.angle_gamma 90 _cell.entry_id 5MXD _cell.length_a 232.913 _cell.length_b 100.737 _cell.length_c 59.045 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MXD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E 1 1 B,F,G 2 1 C,H,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 202 A CYS 155 1_555 A SG CYS 406 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 264 A CYS 217 1_555 A SG CYS 429 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 316 A CYS 269 1_555 A SG CYS 366 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 202 B CYS 155 1_555 B SG CYS 406 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 B SG CYS 264 B CYS 217 1_555 B SG CYS 429 B CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf6 B SG CYS 316 B CYS 269 1_555 B SG CYS 366 B CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 C SG CYS 202 C CYS 155 1_555 C SG CYS 406 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf8 C SG CYS 264 C CYS 217 1_555 C SG CYS 429 C CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf9 C SG CYS 316 C CYS 269 1_555 C SG CYS 366 C CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? # _chem_comp.formula 'C14 H18 N4' _chem_comp.formula_weight 242.32 _chem_comp.id III _chem_comp.mon_nstd_flag . _chem_comp.name ~{N},~{N}-dimethyl-2-pyrrolidin-1-yl-quinazolin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C18 III sing 150 n n C17 C16 III sing 151 n n C18 N14 III sing 152 n n C16 C15 III sing 153 n n N14 C15 III sing 154 n n N14 C6 III sing 155 n n C6 N5 III doub 156 n y C6 N7 III sing 157 n y N5 C4 III sing 158 n y N7 C8 III doub 159 n y C1 N2 III sing 160 n n C4 N2 III sing 161 n n C4 C13 III doub 162 n y C8 C13 III sing 163 n y C8 C9 III sing 164 n y N2 C3 III sing 165 n n C13 C12 III sing 166 n y C9 C10 III doub 167 n y C12 C11 III doub 168 n y C10 C11 III sing 169 n y C1 H1 III sing 170 n n C1 H2 III sing 171 n n C1 H3 III sing 172 n n C3 H4 III sing 173 n n C3 H5 III sing 174 n n C3 H6 III sing 175 n n C9 H7 III sing 176 n n C10 H8 III sing 177 n n C11 H9 III sing 178 n n C12 H10 III sing 179 n n C15 H11 III sing 180 n n C15 H12 III sing 181 n n C16 H13 III sing 182 n n C16 H14 III sing 183 n n C17 H15 III sing 184 n n C17 H16 III sing 185 n n C18 H17 III sing 186 n n C18 H18 III sing 187 n n # _atom_sites.entry_id 5MXD _atom_sites.fract_transf_matrix[1][1] 0.004293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000915 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009927 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 III A 1 701 1 III III . E 3 CL A 1 702 3 CL CL . F 2 III B 1 701 2 III III . G 3 CL B 1 702 2 CL CL . H 2 III C 1 701 3 III III . I 3 CL C 1 702 1 CL CL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 III . . . D 2 -34.007 -45.453 15.173 1 49.48 ? C1 III 701 A 1 HETATM 2 N N2 III . . . D 2 -34.445 -44.351 16.046 1 61.96 ? N2 III 701 A 1 HETATM 3 C C3 III . . . D 2 -33.431 -43.279 16.112 1 59.38 ? C3 III 701 A 1 HETATM 4 C C4 III . . . D 2 -35.744 -43.93 15.757 1 59.6 ? C4 III 701 A 1 HETATM 5 N N5 III . . . D 2 -35.972 -42.834 15.022 1 60.07 ? N5 III 701 A 1 HETATM 6 C C6 III . . . D 2 -37.201 -42.389 14.718 1 59.34 ? C6 III 701 A 1 HETATM 7 N N7 III . . . D 2 -38.282 -43.037 15.128 1 58.16 ? N7 III 701 A 1 HETATM 8 C C8 III . . . D 2 -38.182 -44.154 15.878 1 59.53 ? C8 III 701 A 1 HETATM 9 C C9 III . . . D 2 -39.327 -44.833 16.329 1 60.5 ? C9 III 701 A 1 HETATM 10 C C10 III . . . D 2 -39.198 -45.957 17.102 1 59.51 ? C10 III 701 A 1 HETATM 11 C C11 III . . . D 2 -37.941 -46.449 17.454 1 46.98 ? C11 III 701 A 1 HETATM 12 C C12 III . . . D 2 -36.805 -45.823 17.026 1 55.22 ? C12 III 701 A 1 HETATM 13 C C13 III . . . D 2 -36.888 -44.654 16.234 1 60.47 ? C13 III 701 A 1 HETATM 14 N N14 III . . . D 2 -37.299 -41.234 13.944 1 71.17 ? N14 III 701 A 1 HETATM 15 C C15 III . . . D 2 -36.678 -40.049 14.566 1 67.88 ? C15 III 701 A 1 HETATM 16 C C16 III . . . D 2 -37.087 -38.881 13.627 1 64.18 ? C16 III 701 A 1 HETATM 17 C C17 III . . . D 2 -38.46 -39.329 13.044 1 59.81 ? C17 III 701 A 1 HETATM 18 C C18 III . . . D 2 -38.643 -40.785 13.531 1 69.79 ? C18 III 701 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #