data_5MXK
#
_model_server_result.job_id            BbKerhn6QEOrP6Hsa6NMRw 
_model_server_result.datetime_utc      '2024-11-22 21:01:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5mxk 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
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_entry.id    5MXK 
#
_exptl.entry_id    5MXK 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              203.237 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-(5-oxidanylidene-7,8-dihydro-6~{H}-naphthalen-2-yl)ethanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5MXK 
_cell.length_a            121.199 
_cell.length_b            121.199 
_cell.length_c            33.738 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5MXK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 121.199 -121.199 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C12 H13 N O2' 
_chem_comp.formula_weight    203.237 
_chem_comp.id                ZHA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-(5-oxidanylidene-7,8-dihydro-6~{H}-naphthalen-2-yl)ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 C08 ZHA doub 372 n n 
C08 C09 ZHA sing 373 n n 
C08 N07 ZHA sing 374 n n 
C06 C01 ZHA doub 375 n y 
C06 C05 ZHA sing 376 n y 
C01 C02 ZHA sing 377 n y 
O15 C14 ZHA doub 378 n n 
N07 C05 ZHA sing 379 n n 
C05 C04 ZHA doub 380 n y 
C02 C14 ZHA sing 381 n n 
C02 C03 ZHA doub 382 n y 
C14 C13 ZHA sing 383 n n 
C04 C03 ZHA sing 384 n y 
C03 C11 ZHA sing 385 n n 
C13 C12 ZHA sing 386 n n 
C11 C12 ZHA sing 387 n n 
C13 H1 ZHA sing 388 n n 
C13 H2 ZHA sing 389 n n 
C01 H3 ZHA sing 390 n n 
C04 H4 ZHA sing 391 n n 
C06 H5 ZHA sing 392 n n 
N07 H6 ZHA sing 393 n n 
C09 H7 ZHA sing 394 n n 
C09 H8 ZHA sing 395 n n 
C09 H9 ZHA sing 396 n n 
C11 H10 ZHA sing 397 n n 
C11 H11 ZHA sing 398 n n 
C12 H12 ZHA sing 399 n n 
C12 H13 ZHA sing 400 n n 
#
_atom_sites.entry_id                     5MXK 
_atom_sites.fract_transf_matrix[1][1]    0.008251 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008251 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02964 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZHA A 1 301 1 ZHA LIG . 
C 3 EDO A 1 302 1 EDO EDO . 
D 3 EDO A 1 303 2 EDO EDO . 
E 4 HOH A 1 401 24 HOH HOH . 
E 4 HOH A 2 402 67 HOH HOH . 
E 4 HOH A 3 403 71 HOH HOH . 
E 4 HOH A 4 404 49 HOH HOH . 
E 4 HOH A 5 405 7 HOH HOH . 
E 4 HOH A 6 406 47 HOH HOH . 
E 4 HOH A 7 407 9 HOH HOH . 
E 4 HOH A 8 408 38 HOH HOH . 
E 4 HOH A 9 409 43 HOH HOH . 
E 4 HOH A 10 410 10 HOH HOH . 
E 4 HOH A 11 411 2 HOH HOH . 
E 4 HOH A 12 412 11 HOH HOH . 
E 4 HOH A 13 413 3 HOH HOH . 
E 4 HOH A 14 414 75 HOH HOH . 
E 4 HOH A 15 415 5 HOH HOH . 
E 4 HOH A 16 416 29 HOH HOH . 
E 4 HOH A 17 417 27 HOH HOH . 
E 4 HOH A 18 418 42 HOH HOH . 
E 4 HOH A 19 419 20 HOH HOH . 
E 4 HOH A 20 420 12 HOH HOH . 
E 4 HOH A 21 421 21 HOH HOH . 
E 4 HOH A 22 422 74 HOH HOH . 
E 4 HOH A 23 423 17 HOH HOH . 
E 4 HOH A 24 424 8 HOH HOH . 
E 4 HOH A 25 425 52 HOH HOH . 
E 4 HOH A 26 426 46 HOH HOH . 
E 4 HOH A 27 427 69 HOH HOH . 
E 4 HOH A 28 428 4 HOH HOH . 
E 4 HOH A 29 429 30 HOH HOH . 
E 4 HOH A 30 430 1 HOH HOH . 
E 4 HOH A 31 431 58 HOH HOH . 
E 4 HOH A 32 432 33 HOH HOH . 
E 4 HOH A 33 433 22 HOH HOH . 
E 4 HOH A 34 434 32 HOH HOH . 
E 4 HOH A 35 435 37 HOH HOH . 
E 4 HOH A 36 436 55 HOH HOH . 
E 4 HOH A 37 437 50 HOH HOH . 
E 4 HOH A 38 438 61 HOH HOH . 
E 4 HOH A 39 439 25 HOH HOH . 
E 4 HOH A 40 440 19 HOH HOH . 
E 4 HOH A 41 441 54 HOH HOH . 
E 4 HOH A 42 442 18 HOH HOH . 
E 4 HOH A 43 443 51 HOH HOH . 
E 4 HOH A 44 444 39 HOH HOH . 
E 4 HOH A 45 445 6 HOH HOH . 
E 4 HOH A 46 446 63 HOH HOH . 
E 4 HOH A 47 447 44 HOH HOH . 
E 4 HOH A 48 448 13 HOH HOH . 
E 4 HOH A 49 449 16 HOH HOH . 
E 4 HOH A 50 450 26 HOH HOH . 
E 4 HOH A 51 451 14 HOH HOH . 
E 4 HOH A 52 452 34 HOH HOH . 
E 4 HOH A 53 453 15 HOH HOH . 
E 4 HOH A 54 454 53 HOH HOH . 
E 4 HOH A 55 455 40 HOH HOH . 
E 4 HOH A 56 456 76 HOH HOH . 
E 4 HOH A 57 457 35 HOH HOH . 
E 4 HOH A 58 458 68 HOH HOH . 
E 4 HOH A 59 459 59 HOH HOH . 
E 4 HOH A 60 460 36 HOH HOH . 
E 4 HOH A 61 461 65 HOH HOH . 
E 4 HOH A 62 462 77 HOH HOH . 
E 4 HOH A 63 463 48 HOH HOH . 
E 4 HOH A 64 464 70 HOH HOH . 
E 4 HOH A 65 465 73 HOH HOH . 
E 4 HOH A 66 466 23 HOH HOH . 
E 4 HOH A 67 467 64 HOH HOH . 
E 4 HOH A 68 468 45 HOH HOH . 
E 4 HOH A 69 469 57 HOH HOH . 
E 4 HOH A 70 470 81 HOH HOH . 
E 4 HOH A 71 471 72 HOH HOH . 
E 4 HOH A 72 472 79 HOH HOH . 
E 4 HOH A 73 473 56 HOH HOH . 
E 4 HOH A 74 474 41 HOH HOH . 
E 4 HOH A 75 475 28 HOH HOH . 
E 4 HOH A 76 476 78 HOH HOH . 
E 4 HOH A 77 477 60 HOH HOH . 
E 4 HOH A 78 478 80 HOH HOH . 
E 4 HOH A 79 479 66 HOH HOH . 
E 4 HOH A 80 480 31 HOH HOH . 
E 4 HOH A 81 481 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 ZHA . . . B 2 127.561 26.535 5.006 1 46.96 ? C13 ZHA 301 A 1 
HETATM 2 C C01 ZHA . . . B 2 130.252 26.72 2.181 1 41.79 ? C01 ZHA 301 A 1 
HETATM 3 C C02 ZHA . . . B 2 129.64 26.826 3.444 1 41.93 ? C02 ZHA 301 A 1 
HETATM 4 C C03 ZHA . . . B 2 130.42 27.251 4.532 1 33.76 ? C03 ZHA 301 A 1 
HETATM 5 C C04 ZHA . . . B 2 131.781 27.562 4.379 1 37.31 ? C04 ZHA 301 A 1 
HETATM 6 C C05 ZHA . . . B 2 132.397 27.443 3.123 1 45.94 ? C05 ZHA 301 A 1 
HETATM 7 C C06 ZHA . . . B 2 131.614 27.028 2.02 1 41.28 ? C06 ZHA 301 A 1 
HETATM 8 N N07 ZHA . . . B 2 133.809 27.807 3.018 1 49.68 ? N07 ZHA 301 A 1 
HETATM 9 C C08 ZHA . . . B 2 134.653 27.843 1.829 1 47.11 ? C08 ZHA 301 A 1 
HETATM 10 C C09 ZHA . . . B 2 136.096 28.303 2.011 1 37.67 ? C09 ZHA 301 A 1 
HETATM 11 O O10 ZHA . . . B 2 134.266 27.525 0.748 1 47.91 ? O10 ZHA 301 A 1 
HETATM 12 C C11 ZHA . . . B 2 129.734 27.36 5.951 1 46.38 ? C11 ZHA 301 A 1 
HETATM 13 C C12 ZHA . . . B 2 128.579 26.355 6.093 1 50.69 ? C12 ZHA 301 A 1 
HETATM 14 C C14 ZHA . . . B 2 128.155 26.504 3.656 1 49.48 ? C14 ZHA 301 A 1 
HETATM 15 O O15 ZHA . . . B 2 127.449 26.246 2.744 1 46.46 ? O15 ZHA 301 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           15 
#