data_5MXM # _model_server_result.job_id Vq7SkTyxgs_t3k5TCxXmsw _model_server_result.datetime_utc '2024-11-18 09:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5mxm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5MXM # _exptl.entry_id 5MXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5MXM _cell.length_a 38.363 _cell.length_b 91.104 _cell.length_c 109.01 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5MXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 374 A ASP 374 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc2 B MG MG . A MG 501 1_555 D O3B ADP . A ADP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc3 B MG MG . A MG 501 1_555 D O2A ADP . A ADP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc4 B MG MG . A MG 501 1_555 F O HOH . A HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc5 B MG MG . A MG 501 1_555 F O HOH . A HOH 732 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc6 B MG MG . A MG 501 1_555 F O HOH . A HOH 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5MXM _atom_sites.fract_transf_matrix[1][1] 0.026067 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009173 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 1418 MG MG . C 3 3PG A 1 502 1419 3PG 3PG . D 4 ADP A 1 503 1420 ADP ADP . E 5 BTB A 1 504 1 BTB BTB . F 6 HOH A 1 601 2002 HOH HOH . F 6 HOH A 2 602 17 HOH HOH . F 6 HOH A 3 603 2013 HOH HOH . F 6 HOH A 4 604 1 HOH HOH . F 6 HOH A 5 605 2125 HOH HOH . F 6 HOH A 6 606 2262 HOH HOH . F 6 HOH A 7 607 11 HOH HOH . F 6 HOH A 8 608 2083 HOH HOH . F 6 HOH A 9 609 2104 HOH HOH . F 6 HOH A 10 610 2031 HOH HOH . F 6 HOH A 11 611 2230 HOH HOH . F 6 HOH A 12 612 2053 HOH HOH . F 6 HOH A 13 613 2032 HOH HOH . F 6 HOH A 14 614 2148 HOH HOH . F 6 HOH A 15 615 2065 HOH HOH . F 6 HOH A 16 616 2244 HOH HOH . F 6 HOH A 17 617 2188 HOH HOH . F 6 HOH A 18 618 2231 HOH HOH . F 6 HOH A 19 619 2179 HOH HOH . F 6 HOH A 20 620 2099 HOH HOH . F 6 HOH A 21 621 2021 HOH HOH . F 6 HOH A 22 622 2219 HOH HOH . F 6 HOH A 23 623 2191 HOH HOH . F 6 HOH A 24 624 2259 HOH HOH . F 6 HOH A 25 625 2030 HOH HOH . F 6 HOH A 26 626 2181 HOH HOH . F 6 HOH A 27 627 2121 HOH HOH . F 6 HOH A 28 628 2074 HOH HOH . F 6 HOH A 29 629 2138 HOH HOH . F 6 HOH A 30 630 2082 HOH HOH . F 6 HOH A 31 631 2214 HOH HOH . F 6 HOH A 32 632 2024 HOH HOH . F 6 HOH A 33 633 2158 HOH HOH . F 6 HOH A 34 634 2202 HOH HOH . F 6 HOH A 35 635 2196 HOH HOH . F 6 HOH A 36 636 2274 HOH HOH . F 6 HOH A 37 637 2086 HOH HOH . F 6 HOH A 38 638 2216 HOH HOH . F 6 HOH A 39 639 2107 HOH HOH . F 6 HOH A 40 640 2222 HOH HOH . F 6 HOH A 41 641 2218 HOH HOH . F 6 HOH A 42 642 10 HOH HOH . F 6 HOH A 43 643 2165 HOH HOH . F 6 HOH A 44 644 2034 HOH HOH . F 6 HOH A 45 645 2221 HOH HOH . F 6 HOH A 46 646 2210 HOH HOH . F 6 HOH A 47 647 2233 HOH HOH . F 6 HOH A 48 648 2193 HOH HOH . F 6 HOH A 49 649 2042 HOH HOH . F 6 HOH A 50 650 2269 HOH HOH . F 6 HOH A 51 651 2251 HOH HOH . F 6 HOH A 52 652 2067 HOH HOH . F 6 HOH A 53 653 2117 HOH HOH . F 6 HOH A 54 654 2033 HOH HOH . F 6 HOH A 55 655 2088 HOH HOH . F 6 HOH A 56 656 2147 HOH HOH . F 6 HOH A 57 657 2019 HOH HOH . F 6 HOH A 58 658 2184 HOH HOH . F 6 HOH A 59 659 2 HOH HOH . F 6 HOH A 60 660 2142 HOH HOH . F 6 HOH A 61 661 2037 HOH HOH . F 6 HOH A 62 662 2062 HOH HOH . F 6 HOH A 63 663 2167 HOH HOH . F 6 HOH A 64 664 2143 HOH HOH . F 6 HOH A 65 665 2076 HOH HOH . F 6 HOH A 66 666 2197 HOH HOH . F 6 HOH A 67 667 2152 HOH HOH . F 6 HOH A 68 668 2256 HOH HOH . F 6 HOH A 69 669 2101 HOH HOH . F 6 HOH A 70 670 2175 HOH HOH . F 6 HOH A 71 671 2132 HOH HOH . F 6 HOH A 72 672 7 HOH HOH . F 6 HOH A 73 673 2250 HOH HOH . F 6 HOH A 74 674 2162 HOH HOH . F 6 HOH A 75 675 2201 HOH HOH . F 6 HOH A 76 676 2174 HOH HOH . F 6 HOH A 77 677 2229 HOH HOH . F 6 HOH A 78 678 2212 HOH HOH . F 6 HOH A 79 679 2054 HOH HOH . F 6 HOH A 80 680 2169 HOH HOH . F 6 HOH A 81 681 2012 HOH HOH . F 6 HOH A 82 682 2108 HOH HOH . F 6 HOH A 83 683 2199 HOH HOH . F 6 HOH A 84 684 2098 HOH HOH . F 6 HOH A 85 685 2044 HOH HOH . F 6 HOH A 86 686 2092 HOH HOH . F 6 HOH A 87 687 2072 HOH HOH . F 6 HOH A 88 688 2240 HOH HOH . F 6 HOH A 89 689 2123 HOH HOH . F 6 HOH A 90 690 2137 HOH HOH . F 6 HOH A 91 691 2091 HOH HOH . F 6 HOH A 92 692 2096 HOH HOH . F 6 HOH A 93 693 2228 HOH HOH . F 6 HOH A 94 694 2252 HOH HOH . F 6 HOH A 95 695 2245 HOH HOH . F 6 HOH A 96 696 2208 HOH HOH . F 6 HOH A 97 697 2094 HOH HOH . F 6 HOH A 98 698 2015 HOH HOH . F 6 HOH A 99 699 2227 HOH HOH . F 6 HOH A 100 700 2026 HOH HOH . F 6 HOH A 101 701 2145 HOH HOH . F 6 HOH A 102 702 2215 HOH HOH . F 6 HOH A 103 703 2249 HOH HOH . F 6 HOH A 104 704 2263 HOH HOH . F 6 HOH A 105 705 2271 HOH HOH . F 6 HOH A 106 706 2161 HOH HOH . F 6 HOH A 107 707 2045 HOH HOH . F 6 HOH A 108 708 2209 HOH HOH . F 6 HOH A 109 709 2254 HOH HOH . F 6 HOH A 110 710 2186 HOH HOH . F 6 HOH A 111 711 2211 HOH HOH . F 6 HOH A 112 712 2039 HOH HOH . F 6 HOH A 113 713 2176 HOH HOH . F 6 HOH A 114 714 2081 HOH HOH . F 6 HOH A 115 715 2182 HOH HOH . F 6 HOH A 116 716 2043 HOH HOH . F 6 HOH A 117 717 2239 HOH HOH . F 6 HOH A 118 718 2170 HOH HOH . F 6 HOH A 119 719 4 HOH HOH . F 6 HOH A 120 720 2119 HOH HOH . F 6 HOH A 121 721 2155 HOH HOH . F 6 HOH A 122 722 2270 HOH HOH . F 6 HOH A 123 723 2146 HOH HOH . F 6 HOH A 124 724 2120 HOH HOH . F 6 HOH A 125 725 2237 HOH HOH . F 6 HOH A 126 726 2266 HOH HOH . F 6 HOH A 127 727 2055 HOH HOH . F 6 HOH A 128 728 2220 HOH HOH . F 6 HOH A 129 729 2224 HOH HOH . F 6 HOH A 130 730 2213 HOH HOH . F 6 HOH A 131 731 2173 HOH HOH . F 6 HOH A 132 732 2126 HOH HOH . F 6 HOH A 133 733 2136 HOH HOH . F 6 HOH A 134 734 2265 HOH HOH . F 6 HOH A 135 735 2068 HOH HOH . F 6 HOH A 136 736 2038 HOH HOH . F 6 HOH A 137 737 2156 HOH HOH . F 6 HOH A 138 738 2114 HOH HOH . F 6 HOH A 139 739 2157 HOH HOH . F 6 HOH A 140 740 2246 HOH HOH . F 6 HOH A 141 741 2268 HOH HOH . F 6 HOH A 142 742 2103 HOH HOH . F 6 HOH A 143 743 2183 HOH HOH . F 6 HOH A 144 744 2217 HOH HOH . F 6 HOH A 145 745 2264 HOH HOH . F 6 HOH A 146 746 2203 HOH HOH . F 6 HOH A 147 747 2154 HOH HOH . F 6 HOH A 148 748 2151 HOH HOH . F 6 HOH A 149 749 2195 HOH HOH . F 6 HOH A 150 750 2100 HOH HOH . F 6 HOH A 151 751 2238 HOH HOH . F 6 HOH A 152 752 2008 HOH HOH . F 6 HOH A 153 753 12 HOH HOH . F 6 HOH A 154 754 2276 HOH HOH . F 6 HOH A 155 755 18 HOH HOH . F 6 HOH A 156 756 2022 HOH HOH . F 6 HOH A 157 757 2029 HOH HOH . F 6 HOH A 158 758 2134 HOH HOH . F 6 HOH A 159 759 2272 HOH HOH . F 6 HOH A 160 760 2261 HOH HOH . F 6 HOH A 161 761 2046 HOH HOH . F 6 HOH A 162 762 2004 HOH HOH . F 6 HOH A 163 763 2080 HOH HOH . F 6 HOH A 164 764 2109 HOH HOH . F 6 HOH A 165 765 2236 HOH HOH . F 6 HOH A 166 766 2187 HOH HOH . F 6 HOH A 167 767 13 HOH HOH . F 6 HOH A 168 768 2093 HOH HOH . F 6 HOH A 169 769 2257 HOH HOH . F 6 HOH A 170 770 2129 HOH HOH . F 6 HOH A 171 771 2105 HOH HOH . F 6 HOH A 172 772 5 HOH HOH . F 6 HOH A 173 773 2090 HOH HOH . F 6 HOH A 174 774 2113 HOH HOH . F 6 HOH A 175 775 2061 HOH HOH . F 6 HOH A 176 776 2130 HOH HOH . F 6 HOH A 177 777 6 HOH HOH . F 6 HOH A 178 778 2124 HOH HOH . F 6 HOH A 179 779 2234 HOH HOH . F 6 HOH A 180 780 2077 HOH HOH . F 6 HOH A 181 781 2164 HOH HOH . F 6 HOH A 182 782 2163 HOH HOH . F 6 HOH A 183 783 2122 HOH HOH . F 6 HOH A 184 784 2194 HOH HOH . F 6 HOH A 185 785 2198 HOH HOH . F 6 HOH A 186 786 2041 HOH HOH . F 6 HOH A 187 787 2189 HOH HOH . F 6 HOH A 188 788 2095 HOH HOH . F 6 HOH A 189 789 2135 HOH HOH . F 6 HOH A 190 790 2025 HOH HOH . F 6 HOH A 191 791 2226 HOH HOH . F 6 HOH A 192 792 2248 HOH HOH . F 6 HOH A 193 793 2235 HOH HOH . F 6 HOH A 194 794 3 HOH HOH . F 6 HOH A 195 795 2267 HOH HOH . F 6 HOH A 196 796 2075 HOH HOH . F 6 HOH A 197 797 2087 HOH HOH . F 6 HOH A 198 798 2253 HOH HOH . F 6 HOH A 199 799 2275 HOH HOH . F 6 HOH A 200 800 2141 HOH HOH . F 6 HOH A 201 801 2153 HOH HOH . F 6 HOH A 202 802 2207 HOH HOH . F 6 HOH A 203 803 2172 HOH HOH . F 6 HOH A 204 804 2171 HOH HOH . F 6 HOH A 205 805 2168 HOH HOH . F 6 HOH A 206 806 2058 HOH HOH . F 6 HOH A 207 807 2110 HOH HOH . F 6 HOH A 208 808 2040 HOH HOH . F 6 HOH A 209 809 2192 HOH HOH . F 6 HOH A 210 810 2139 HOH HOH . F 6 HOH A 211 811 2111 HOH HOH . F 6 HOH A 212 812 2116 HOH HOH . F 6 HOH A 213 813 2260 HOH HOH . F 6 HOH A 214 814 2102 HOH HOH . F 6 HOH A 215 815 2258 HOH HOH . F 6 HOH A 216 816 2241 HOH HOH . F 6 HOH A 217 817 2127 HOH HOH . F 6 HOH A 218 818 2097 HOH HOH . F 6 HOH A 219 819 2017 HOH HOH . F 6 HOH A 220 820 2177 HOH HOH . F 6 HOH A 221 821 14 HOH HOH . F 6 HOH A 222 822 2166 HOH HOH . F 6 HOH A 223 823 2085 HOH HOH . F 6 HOH A 224 824 2206 HOH HOH . F 6 HOH A 225 825 2051 HOH HOH . F 6 HOH A 226 826 2047 HOH HOH . F 6 HOH A 227 827 2180 HOH HOH . F 6 HOH A 228 828 2115 HOH HOH . F 6 HOH A 229 829 2089 HOH HOH . F 6 HOH A 230 830 2106 HOH HOH . F 6 HOH A 231 831 2010 HOH HOH . F 6 HOH A 232 832 2243 HOH HOH . F 6 HOH A 233 833 2205 HOH HOH . F 6 HOH A 234 834 2242 HOH HOH . F 6 HOH A 235 835 2185 HOH HOH . F 6 HOH A 236 836 2144 HOH HOH . F 6 HOH A 237 837 2064 HOH HOH . F 6 HOH A 238 838 2232 HOH HOH . F 6 HOH A 239 839 2204 HOH HOH . F 6 HOH A 240 840 2178 HOH HOH . F 6 HOH A 241 841 2225 HOH HOH . F 6 HOH A 242 842 2118 HOH HOH . F 6 HOH A 243 843 9 HOH HOH . F 6 HOH A 244 844 2247 HOH HOH . F 6 HOH A 245 845 2063 HOH HOH . F 6 HOH A 246 846 2070 HOH HOH . F 6 HOH A 247 847 2200 HOH HOH . F 6 HOH A 248 848 2036 HOH HOH . F 6 HOH A 249 849 2007 HOH HOH . F 6 HOH A 250 850 16 HOH HOH . F 6 HOH A 251 851 2011 HOH HOH . F 6 HOH A 252 852 2273 HOH HOH . F 6 HOH A 253 853 19 HOH HOH . F 6 HOH A 254 854 2005 HOH HOH . F 6 HOH A 255 855 2277 HOH HOH . F 6 HOH A 256 856 2016 HOH HOH . F 6 HOH A 257 857 2035 HOH HOH . F 6 HOH A 258 858 2020 HOH HOH . F 6 HOH A 259 859 2079 HOH HOH . F 6 HOH A 260 860 2014 HOH HOH . F 6 HOH A 261 861 2078 HOH HOH . F 6 HOH A 262 862 2071 HOH HOH . F 6 HOH A 263 863 2069 HOH HOH . F 6 HOH A 264 864 15 HOH HOH . F 6 HOH A 265 865 2112 HOH HOH . F 6 HOH A 266 866 2049 HOH HOH . F 6 HOH A 267 867 2052 HOH HOH . F 6 HOH A 268 868 2048 HOH HOH . F 6 HOH A 269 869 2018 HOH HOH . F 6 HOH A 270 870 2073 HOH HOH . F 6 HOH A 271 871 2003 HOH HOH . F 6 HOH A 272 872 2066 HOH HOH . F 6 HOH A 273 873 2001 HOH HOH . F 6 HOH A 274 874 2059 HOH HOH . F 6 HOH A 275 875 2023 HOH HOH . F 6 HOH A 276 876 2060 HOH HOH . F 6 HOH A 277 877 2149 HOH HOH . F 6 HOH A 278 878 2028 HOH HOH . F 6 HOH A 279 879 8 HOH HOH . F 6 HOH A 280 880 2190 HOH HOH . F 6 HOH A 281 881 2050 HOH HOH . F 6 HOH A 282 882 2150 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.166 _atom_site.Cartn_y 10.64 _atom_site.Cartn_z -20.132 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 1 #